Gene: AT2G38770

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G38770
  • Transcript Identifier AT2G38770.1
  • Gene Type Coding gene
  • Location Chr2 : 16203185-16210253 : negative

Gene Family Information

  • ID HOM05D003704
  • #Genes/#Species 185/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G38770.1
  • symbol EMB2765
  • full_name EMBRYO DEFECTIVE 2765
  • uniprot Q8L5Y4

Descriptions

  • Description P-loop containing nucleoside triphosphate hydrolases superfamily protein
  • Computational description EMBRYO DEFECTIVE 2765 (EMB2765); LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RNA helicase, putative (TAIR:AT5G47010.1); Has 4121 Blast hits to 3614 proteins in 689 species: Archae - 125; Bacteria - 655; Metazoa - 959; Fungi - 1056; Plants - 630; Viruses - 0; Other Eukaryotes - 696 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
Gene OntologymRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
Gene Ontologyhelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003729
IDA, HDA
IBA
Gene OntologymRNA binding1 2 3
GO:0003723
IBA
Gene OntologyRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071013
IBA
Gene Ontologycatalytic step 2 spliceosome1
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005681
IEA
InterProspliceosomal complex
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005794
HDA
Gene OntologyGolgi apparatus4
GO:0005829
RCA
Gene Ontologycytosol5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR026300 CWF11 family
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR041679 DNA2/NAM7 helicase-like, C-terminal
IPR045055 DNA2/NAM7-like helicase
IPR041677 DNA2/NAM7 helicase, helicase domain
IPR032174 Intron-binding protein aquarius, N-terminal
Mapman id Description
16.2.5.2.3 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component MAC7