Gene: Zm00001eb018810

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb018810
  • Transcript Identifier Zm00001eb018810_T001
  • Gene Type Coding gene
  • Location 1 : 67351793-67361299 : positive

Gene Family Information

  • ID HOM05D003704
  • #Genes/#Species 185/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb018810_T001
  • pid Zm00001eb018810_P001
  • uniprot A0A1D6K4P2
  • uniprot A0A1D6IC47
  • uniprot A0A1D6K4P5
  • uniprot A0A1D6K4Q6
  • uniprot A0A317YH71
  • uniprot A0A1D6K4Q5
  • uniprot A0A1D6K4Q2
  • uniprot A0A1D6K4P0
  • uniprot A0A1D6K4Q1
  • uniprot A0A1D6K4N9
  • uniprot A0A1D6K4P7
  • uniprot A0A1D6K4P9
  • V4_identifier Zm00001d029375

Descriptions

  • Description Zm00001e001866
  • Description P-loop containing nucleoside triphosphate hydrolases superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0000184
IEA
GOA Databasenuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003724
IEA
GOA DatabaseRNA helicase activity
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0003729
IBA
IEA
GOA DatabasemRNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005681
IEA
InterProspliceosomal complex
GO:0071013
IBA
GOA Databasecatalytic step 2 spliceosome
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005886
IEA
GOA Databaseplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041677 DNA2/NAM7 helicase, helicase domain
IPR032174 Intron-binding protein aquarius, N-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR026300 CWF11 family
IPR041679 DNA2/NAM7 helicase-like, C-terminal
IPR045055 DNA2/NAM7-like helicase
Mapman id Description
16.2.5.2.3 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component MAC7