Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 0.0e+00 1221.5 618 100.0
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 3.6e-176 622.5 677 52.4
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 6.7e-175 618.2 676 52.5
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 6.3e-173 611.7 671 51.9
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 1.1e-172 610.9 661 53.0
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 1.8e-172 610.1 680 51.8
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 1.3e-170 604.0 679 51.8
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 1.7e-170 603.6 670 50.1
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 1.9e-169 600.1 656 52.1
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 2.7e-168 596.3 650 51.2
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 7.9e-168 594.7 668 52.4
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 1.0e-167 594.3 673 50.8
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 1.8e-167 593.6 676 50.7
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 1.8e-167 593.6 652 52.1
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 6.7e-167 591.7 666 51.2
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 1.1e-166 590.9 694 49.9
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 2.0e-166 590.1 641 52.6
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 4.4e-166 589.0 638 52.2
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 7.4e-166 588.2 662 50.5
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 2.8e-165 586.3 681 49.8
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 4.8e-165 585.5 675 51.1
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 8.2e-165 584.7 697 49.2
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 3.1e-164 582.8 678 50.6
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 4.1e-164 582.4 653 50.8
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 4.1e-164 582.4 666 49.1
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 9.1e-164 581.3 668 49.4
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 2.6e-163 579.7 714 48.0
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 4.5e-163 578.9 673 50.1
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 1.3e-162 577.4 657 51.4
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 1.3e-162 577.4 645 50.2
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 3.8e-162 575.9 652 50.5
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 1.9e-161 573.5 664 49.8
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 3.2e-161 572.8 668 49.3
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 5.5e-161 572.0 666 48.8
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 2.1e-160 570.1 668 49.3
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 4.7e-160 568.9 691 47.5
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 6.1e-160 568.5 691 47.3
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 5.2e-159 565.5 669 49.3
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 5.2e-159 565.5 675 49.3
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.7e-157 560.5 689 48.0
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 1.8e-156 557.0 744 46.8
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 3.1e-156 556.2 671 49.0
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 5.3e-156 555.4 672 49.4
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 7.0e-156 555.1 672 48.8
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 7.7e-155 551.6 663 47.4
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 1.3e-154 550.8 618 51.0
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 2.9e-154 549.7 643 49.6
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 3.8e-154 549.3 667 48.6
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 3.8e-154 549.3 616 49.7
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 1.6e-152 543.9 641 48.7
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 3.6e-152 542.7 642 49.4
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 6.1e-152 542.0 719 45.8
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 8.0e-152 541.6 689 47.5
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 1.0e-151 541.2 664 48.8
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 1.0e-151 541.2 642 48.9
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 3.0e-151 539.7 665 48.6
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 4.0e-151 539.3 662 47.9
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 5.2e-151 538.9 656 48.9
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 5.2e-151 538.9 630 48.9
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 8.8e-151 538.1 667 48.4
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 2.0e-150 537.0 648 49.1
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 2.0e-150 537.0 648 49.1
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 2.0e-150 537.0 648 49.1
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 2.2e-149 533.5 675 47.7
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 2.8e-149 533.1 611 50.6
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 1.1e-148 531.2 665 47.1
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 1.5e-145 520.8 659 48.0
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 1.5e-145 520.8 606 49.8
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 5.5e-145 518.8 628 48.7
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 9.4e-145 518.1 623 46.5
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 8.0e-144 515.0 842 41.4
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 4.0e-143 512.7 658 46.5
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 8.8e-143 511.5 625 46.9
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 1.5e-142 510.8 599 49.4
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 9.8e-142 508.1 627 47.7
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 2.4e-140 503.4 552 50.0
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 4.1e-140 502.7 592 49.7
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 5.4e-140 502.3 614 48.4
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 3.6e-136 489.6 621 47.5
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 6.1e-136 488.8 627 46.1
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 1.0e-135 488.0 613 44.9
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 2.0e-134 483.8 613 45.7
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 1.7e-133 480.7 622 46.5
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 5.4e-132 475.7 651 43.3
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 2.9e-130 469.9 566 48.6
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 2.1e-128 463.8 531 50.8
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.1e-124 451.4 547 48.4
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 3.5e-123 446.4 653 44.0
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 4.6e-123 446.0 635 42.4
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 5.6e-121 439.1 546 47.6
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 1.1e-119 434.9 538 47.6
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 8.6e-114 415.2 627 39.9
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 8.6e-114 415.2 518 47.9
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 3.7e-109 399.8 662 38.4
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 1.1e-105 388.3 484 47.3
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 5.6e-105 386.0 485 47.4
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 5.6e-105 386.0 645 39.4
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 2.8e-104 383.6 595 42.4
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 1.9e-100 370.9 507 46.2
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 2.8e-88 330.5 476 43.9
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 1.3e-82 311.6 619 35.1
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 9.6e-81 305.4 257 60.7
Psat5g213680 Pisum sativum HOM05D004944 ORTHO05D005989 2.5e-76 290.8 448 40.2
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 3.9e-74 283.5 222 62.2
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 5.1e-74 283.1 739 32.5
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 8.7e-74 282.3 905 26.9
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 1.3e-72 278.5 142 99.3
Sc10g0004230 Simmondsia chinensis HOM05D004944 ORTHO05D005989 6.9e-71 272.7 451 41.0
vmacro13722 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 7.6e-70 269.2 219 62.6
FAN10G4268 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.7e-67 260.8 223 58.3
Peaxi162Scf00309g00015 Petunia axillaris HOM05D004944 ORTHO05D005989 2.7e-67 260.8 217 61.8
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 1.3e-53 215.3 170 64.1
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 2.9e-53 214.2 169 63.3
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 2.4e-47 194.5 164 59.1
CSS0031841 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 9.1e-47 192.6 121 75.2
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 6.1e-43 179.9 135 65.9
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 3.9e-42 177.2 146 62.3
ATR0721G017 Amborella trichopoda HOM05D004944 ORTHO05D005989 2.6e-41 174.5 340 37.4
Ca_04546_v3 Cicer arietinum L. HOM05D004944 ORTHO05D005989 1.3e-40 172.2 252 41.7
FAN01G1245 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.0e-38 164.9 146 58.9
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 3.5e-38 164.1 176 47.7
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 1.7e-37 161.8 166 54.2
BcaNung04417 Brassica carinata HOM05D000343 ORTHO05D003187 6.5e-37 159.8 201 49.8
Lj9A645G78 Lonicera japonica HOM05D004944 ORTHO05D005989 1.8e-34 151.8 313 37.4
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 8.8e-34 149.4 176 50.0
Sp5g22360 Schrenkiella parvula HOM05D004944 ORTHO05D005989 1.2e-33 149.1 139 55.4
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 1.8e-31 141.7 282 34.0
SHI03969 Sapria himalayana HOM05D004944 ORTHO05D005989 1.3e-29 135.6 165 48.5
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 1.3e-29 135.6 101 65.3
Lj9A645G77 Lonicera japonica HOM05D004944 ORTHO05D005989 1.9e-28 131.7 123 51.2
MCO01G407 Micromonas commoda HOM05D004944 ORTHO05D005989 8.8e-26 122.9 323 28.8
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 2.6e-25 121.3 146 46.6
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 5.9e-22 110.2 273 27.8
Cre12.g555050 Chlamydomonas reinhardtii HOM05D004944 ORTHO05D005989 1.5e-20 105.5 173 36.4
Prupe.2G099800 Prunus persica HOM05D004944 ORTHO05D005989 3.0e-18 97.8 234 31.2
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 8.9e-18 96.3 146 42.5
CSS0024385 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 2.6e-17 94.7 90 55.6
RcHm_v2.0_Chr4g0391951 Rosa chinensis HOM05D004944 ORTHO05D005989 5.7e-17 93.6 97 46.4
Lj9A645G79 Lonicera japonica HOM05D004944 ORTHO05D005989 7.5e-17 93.2 62 72.6
SHI03976 Sapria himalayana HOM05D004944 ORTHO05D005989 4.1e-15 87.4 73 57.5
Psat5g213600 Pisum sativum HOM05D004944 ORTHO05D005989 2.0e-14 85.1 151 37.7
Peaxi162Scf00309g00011 Petunia axillaris HOM05D004944 ORTHO05D005989 7.8e-14 83.2 52 76.9
HPP92_002716 Vanilla planifolia HOM05D003563 ORTHO05D005325 1.2e-11 75.9 41 87.8
SHI03965 Sapria himalayana HOM05D004944 ORTHO05D005989 4.4e-09 67.4 78 48.7
Lalb_Chr04g0263911 Lupinus albus HOM05D004944 ORTHO05D005989 7.8e-06 56.6 65 43.1


User provided reference genes

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