Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.008G142400 Gossypium raimondii HOM05D000216 ORTHO05D000634 2.4e-81 305.4 153 100.0
Gohir.D12G131101 Gossypium hirsutum HOM05D000216 ORTHO05D000634 4.6e-77 291.2 153 96.1
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 2.2e-58 229.2 138 79.0
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 6.3e-58 227.6 139 78.4
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 7.2e-54 214.2 145 75.9
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 7.2e-54 214.2 145 75.9
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 3.6e-53 211.8 145 73.8
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 3.6e-53 211.8 145 75.2
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 3.6e-53 211.8 145 75.2
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 3.0e-52 208.8 134 76.1
Gohir.A09G101340 Gossypium hirsutum HOM05D000216 ORTHO05D000634 8.8e-52 207.2 114 92.1
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 8.8e-52 207.2 138 75.4
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.2e-51 206.8 139 75.5
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.5e-51 206.5 138 76.8
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 7.5e-51 204.1 139 71.9
GSVIVG01034287001 Vitis vinifera HOM05D000216 ORTHO05D000634 1.7e-50 203.0 132 78.8
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.7e-50 201.8 139 71.2
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.7e-50 201.8 139 71.2
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.7e-50 201.8 139 71.2
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.7e-50 201.8 139 71.2
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.7e-50 201.8 139 71.2
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 1.1e-49 200.3 138 73.2
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 1.1e-49 200.3 138 73.2
Medtr3g450720 Medicago truncatula HOM05D000216 ORTHO05D000634 1.4e-49 199.9 139 69.1
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 1.4e-49 199.9 139 69.1
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.8e-49 199.5 139 73.4
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 2.0e-48 196.1 132 75.8
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 2.0e-48 196.1 134 73.9
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 7.7e-48 194.1 142 72.5
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.0e-47 193.7 126 77.0
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.0e-47 193.7 126 77.0
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 1.1e-46 190.3 136 72.1
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 1.5e-43 179.9 139 62.6
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 8.3e-42 174.1 141 63.8
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 1.1e-41 173.7 139 64.7
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.1e-41 173.7 139 64.7
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 1.1e-41 173.7 139 64.7
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.1e-41 173.7 139 64.7
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 1.4e-41 173.3 139 64.7
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 2.4e-41 172.6 126 69.0
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 9.2e-41 170.6 138 62.3
ClCG07G007330 Citrullus lanatus HOM05D000216 ORTHO05D000634 2.7e-40 169.1 141 65.2
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-38 163.3 139 64.7
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-38 163.3 139 64.7
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-38 163.3 139 64.7
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-38 163.3 139 64.7
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-38 163.3 139 64.7
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-38 163.3 139 64.7
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-38 163.3 139 64.7
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-38 163.3 139 64.7
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-38 163.3 139 64.7
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-38 163.3 139 64.7
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 1.6e-37 159.8 103 74.8
Potri.019G027580 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.8e-37 159.1 96 78.1
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.8e-36 156.4 113 69.0
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.8e-36 156.4 141 61.7
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.8e-36 156.4 141 61.7
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.9e-36 154.1 138 61.6
Lj2C1237G1 Lonicera japonica HOM05D000216 ORTHO05D000634 5.9e-32 141.4 93 74.2
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 3.0e-31 139.0 94 72.3
Phvul.003G256666 Phaseolus vulgaris HOM05D000216 ORTHO05D000634 6.6e-31 137.9 94 73.4
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 5.6e-30 134.8 82 81.7
HanXRQChr14g0455011 Helianthus annuus HOM05D000216 ORTHO05D000634 6.2e-29 131.3 121 57.0
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 5.2e-28 128.3 109 61.5
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 5.2e-28 128.3 109 61.5
Hund07969 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.9e-28 127.5 98 66.3
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 2.0e-27 126.3 102 62.7
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 5.8e-27 124.8 89 70.8
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 9.8e-27 124.0 140 50.0
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-25 119.4 85 71.8
Solyc08g028920.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.8e-24 114.4 71 71.8
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.3e-22 107.8 94 56.4
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.8e-21 105.9 148 42.6
Nitab4.5_0011099g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.8e-20 103.2 78 64.1
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 2.3e-20 102.8 85 60.0
Hund04024 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.4e-19 98.6 98 58.2
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 2.9e-18 95.9 134 42.5
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 6.4e-18 94.7 85 54.1
Zm00001eb271610 Zea mays HOM05D000216 ORTHO05D000634 1.9e-17 93.2 85 52.9
HanXRQChr14g0436631 Helianthus annuus HOM05D000216 ORTHO05D000634 2.7e-16 89.4 72 63.9
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.3e-15 87.0 102 52.0
Solyc01g017510.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.3e-15 86.3 104 46.2
Hund10655 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.6e-15 84.3 123 43.1
TPR.G11287 Trifolium pratense HOM05D000216 ORTHO05D000634 2.5e-14 82.8 75 56.0
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 9.5e-14 80.9 50 74.0
TPR.G1481 Trifolium pratense HOM05D000216 ORTHO05D000634 2.8e-13 79.3 61 59.0
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 4.0e-12 75.5 56 66.1
Migut.M00502 Erythranthe guttata HOM05D000216 ORTHO05D000634 8.9e-12 74.3 89 49.4
BraSC143t45681Z Brassica rapa HOM05D000216 ORTHO05D000634 1.3e-10 70.5 49 73.5
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 1.3e-10 70.5 49 73.5
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 1.3e-10 70.5 59 62.7
Nitab4.5_0003361g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.2e-10 69.7 57 64.9
EL10Ac6g14564 Beta vulgaris HOM05D000216 ORTHO05D000634 8.4e-10 67.8 73 54.8
CsaV3_5G013200 Cucumis sativus L. HOM05D000580 ORTHO05D001488 1.1e-09 67.4 56 62.5
BraSC143t45682Z Brassica rapa HOM05D000216 ORTHO05D000634 1.4e-09 67.0 39 76.9
BraSC58t46406Z Brassica rapa HOM05D000216 ORTHO05D000634 1.4e-09 67.0 39 76.9
Migut.D01415 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.1e-08 63.2 37 81.1
Migut.J01368 Erythranthe guttata HOM05D000216 ORTHO05D000634 4.6e-08 62.0 50 62.0
Nitab4.5_0000502g0040 Nicotiana tabacum HOM05D000216 ORTHO05D000634 4.6e-08 62.0 45 62.2
ClCG01G011270 Citrullus lanatus HOM05D000216 ORTHO05D000634 1.0e-07 60.8 50 68.0
Nn4g23967 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.7e-07 60.1 36 77.8
Zm00001eb418100 Zea mays HOM05D000216 ORTHO05D000634 8.6e-07 57.8 50 56.0
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 1.5e-06 57.0 54 51.9


User provided reference genes

Program Settings