Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gorai.005G047300 Gossypium raimondii HOM05D000216 ORTHO05D001131 7.7e-32 139.8 68 100.0
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.8e-25 118.6 61 93.4
Psat0s5655g0160 Pisum sativum HOM05D000216 ORTHO05D001131 1.2e-24 115.9 65 83.1
BolC7t41731H Brassica oleracea HOM05D000216 ORTHO05D001131 1.3e-23 112.5 61 85.2
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 1.7e-23 112.1 61 85.2
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 1.7e-23 112.1 61 85.2
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 1.7e-23 112.1 61 85.2
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 2.2e-23 111.7 61 86.9
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 2.9e-23 111.3 61 85.2
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 2.9e-23 111.3 61 85.2
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 2.9e-23 111.3 61 85.2
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.9e-23 111.3 61 85.2
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 2.9e-23 111.3 61 85.2
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 2.9e-23 111.3 61 85.2
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 2.9e-23 111.3 61 85.2
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 2.9e-23 111.3 61 85.2
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 5.0e-23 110.5 61 85.2
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 6.5e-23 110.2 61 85.2
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 6.5e-23 110.2 61 85.2
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 6.5e-23 110.2 61 85.2
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 6.5e-23 110.2 61 83.6
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 6.5e-23 110.2 61 85.2
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 8.5e-23 109.8 61 83.6
C04p22650 Brassica napus HOM05D000216 ORTHO05D001131 8.5e-23 109.8 61 83.6
BolSC37t60764H Brassica oleracea HOM05D000216 ORTHO05D001131 8.5e-23 109.8 61 83.6
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 8.5e-23 109.8 61 83.6
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 8.5e-23 109.8 61 83.6
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 8.5e-23 109.8 61 83.6
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 8.5e-23 109.8 61 83.6
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 8.5e-23 109.8 61 83.6
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 8.5e-23 109.8 61 83.6
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 8.5e-23 109.8 61 85.2
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 1.5e-22 109.0 61 83.6
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 2.5e-22 108.2 61 83.6
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 2.5e-22 108.2 61 83.6
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 2.5e-22 108.2 61 83.6
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 2.5e-22 108.2 61 83.6
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 2.5e-22 108.2 61 83.6
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 2.5e-22 108.2 61 83.6
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 2.5e-22 108.2 61 83.6
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 2.5e-22 108.2 61 83.6
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 2.5e-22 108.2 61 83.6
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 2.5e-22 108.2 61 78.7
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 3.2e-22 107.8 61 82.0
VMungo0647G1325 Vigna mungo HOM05D000216 ORTHO05D001131 3.2e-22 107.8 61 85.2
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 3.2e-22 107.8 61 85.2
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 4.2e-22 107.5 61 83.6
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 4.2e-22 107.5 60 81.7
Psat4g147960 Pisum sativum HOM05D000216 ORTHO05D001131 5.5e-22 107.1 61 82.0
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 7.2e-22 106.7 61 82.0
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27928 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27944 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28280 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28292 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28372 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28555 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-22 106.3 61 80.3
arahy.Tifrunner.gnm1.ann1.Q51NGA Arachis hypogaea HOM05D000216 ORTHO05D001131 1.2e-21 105.9 61 82.0
Eucgr.E02520 Eucalyptus grandis HOM05D000216 ORTHO05D001131 1.2e-21 105.9 61 83.6
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 1.2e-21 105.9 61 80.3
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 1.2e-21 105.9 61 80.3
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.2e-21 105.9 61 80.3
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 2.1e-21 105.1 61 82.0
Hund28715 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.1e-21 105.1 61 78.7
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 3.6e-21 104.4 61 80.3
Gohir.D12G085301 Gossypium hirsutum HOM05D000216 ORTHO05D001131 4.7e-21 104.0 61 78.7
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 4.7e-21 104.0 61 80.3
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 4.7e-21 104.0 61 78.7
HanXRQChr11g0326591 Helianthus annuus HOM05D000216 ORTHO05D001131 6.1e-21 103.6 61 80.3
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 6.1e-21 103.6 61 80.3
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 6.1e-21 103.6 61 80.3
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 6.1e-21 103.6 61 80.3
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.0e-20 102.8 59 81.4
Gorai.008G095600 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.4e-20 102.4 61 78.7
ClCG07G004170 Citrullus lanatus HOM05D000216 ORTHO05D001131 6.8e-20 100.1 61 77.0
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 6.8e-20 100.1 61 77.0
Solyc02g067590.2 Solanum lycopersicum HOM05D000216 ORTHO05D001131 6.8e-20 100.1 61 77.0
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 2.0e-19 98.6 56 82.1
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 4.4e-19 97.4 61 78.7
Medtr5g005060 Medicago truncatula HOM05D000216 ORTHO05D001131 5.7e-19 97.1 53 81.1
HanXRQChr00c0165g0572161 Helianthus annuus HOM05D000216 ORTHO05D001131 7.5e-19 96.7 61 78.7
Psat0s6638g0160 Pisum sativum HOM05D000216 ORTHO05D001131 2.2e-18 95.1 53 84.9
BolSC45t60873H Brassica oleracea HOM05D000216 ORTHO05D001131 1.1e-17 92.8 54 79.6
Gorai.007G168000 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.0e-16 88.6 54 79.6
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.2e-15 85.1 42 88.1
BolSC46t60987H Brassica oleracea HOM05D000216 ORTHO05D001131 1.5e-14 82.4 61 68.9
BraSC25t45880Z Brassica rapa HOM05D000216 ORTHO05D001131 5.5e-14 80.5 64 64.1
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 3.6e-13 77.8 42 81.0
Mapoly0019s0087 Marchantia polymorpha HOM05D000216 ORTHO05D001131 1.0e-12 76.3 57 56.1
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.3e-12 75.1 53 69.8
CSS0046430 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D001131 6.8e-12 73.6 61 62.3
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 2.2e-10 68.6 38 76.3
Migut.E00860 Erythranthe guttata HOM05D000216 ORTHO05D001131 2.2e-10 68.6 33 90.9
Solyc12g035950.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 3.7e-10 67.8 51 68.6
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 4.8e-10 67.4 61 59.0
Eucgr.B02475 Eucalyptus grandis HOM05D000216 ORTHO05D001131 1.1e-09 66.2 61 59.0
Eucgr.C02946 Eucalyptus grandis HOM05D000216 ORTHO05D001131 1.6e-08 62.4 32 81.2
Nitab4.5_0001715g0110 Nicotiana tabacum HOM05D000216 ORTHO05D001131 1.1e-06 56.2 61 52.5
TPR.G32479 Trifolium pratense HOM05D000216 ORTHO05D001131 7.2e-06 53.5 28 78.6


User provided reference genes

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