Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 5.3e-142 507.7 257 100.0
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 1.1e-131 473.4 257 93.0
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 1.5e-120 436.4 257 86.4
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.9e-115 419.5 259 83.8
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 6.1e-98 361.3 264 70.5
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 8.9e-97 357.5 257 70.4
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 1.2e-96 357.1 254 72.8
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 9.8e-96 354.0 257 70.0
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 1.3e-95 353.6 253 70.4
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 8.3e-95 350.9 250 72.8
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 3.2e-94 349.0 253 71.1
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 1.5e-83 313.5 254 61.8
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 8.9e-81 304.3 256 64.1
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 8.9e-81 304.3 255 62.4
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 8.9e-81 304.3 255 62.4
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 1.7e-79 300.1 249 60.6
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 2.9e-79 299.3 255 62.0
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 8.3e-79 297.7 242 64.9
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 1.9e-78 296.6 249 61.8
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 1.2e-77 293.9 242 62.8
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 1.6e-77 293.5 253 58.9
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 2.7e-77 292.7 255 60.0
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 4.6e-77 292.0 249 61.0
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 6.0e-77 291.6 244 61.9
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 7.8e-77 291.2 254 62.2
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 7.8e-77 291.2 253 58.5
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 1.0e-76 290.8 256 57.8
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 6.6e-76 288.1 254 57.9
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.1e-75 287.3 248 61.3
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.9e-75 286.6 259 58.7
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 4.3e-75 285.4 236 62.7
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 1.6e-74 283.5 258 57.0
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 6.2e-74 281.6 246 59.3
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 8.1e-74 281.2 255 58.8
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 8.1e-74 281.2 261 56.3
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 1.1e-73 280.8 222 64.0
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 3.1e-73 279.3 253 58.1
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 4.0e-73 278.9 258 56.6
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 5.2e-73 278.5 253 58.1
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 6.8e-73 278.1 253 57.3
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.0e-72 276.6 261 55.6
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.6e-72 276.2 253 57.7
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 2.6e-72 276.2 245 57.6
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 4.4e-72 275.4 248 58.1
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 4.4e-72 275.4 262 57.3
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 1.3e-71 273.9 282 52.8
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.9e-71 272.7 279 54.1
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 4.9e-71 271.9 253 56.5
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 5.4e-70 268.5 239 59.8
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 7.1e-70 268.1 260 55.4
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 2.1e-69 266.5 257 55.3
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 2.7e-69 266.2 248 59.7
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 2.7e-69 266.2 259 55.6
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 3.5e-69 265.8 211 60.7
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 7.8e-69 264.6 345 44.3
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 3.0e-68 262.7 233 56.2
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 3.0e-68 262.7 257 54.9
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 3.0e-68 262.7 212 61.8
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 8.6e-68 261.2 260 55.0
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 1.1e-67 260.8 255 54.5
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 7.3e-67 258.1 253 54.5
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.2e-66 257.3 241 56.8
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 1.6e-66 256.9 273 51.6
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 2.8e-66 256.1 258 52.7
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.8e-66 256.1 257 54.5
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.8e-66 256.1 257 54.5
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 3.1e-65 252.7 252 54.0
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 1.2e-64 250.8 225 57.3
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 1.5e-64 250.4 224 55.4
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 1.5e-64 250.4 305 47.2
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 5.8e-64 248.4 243 53.9
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 7.6e-64 248.1 247 53.0
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 9.9e-64 247.7 252 56.0
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 1.3e-63 247.3 237 54.4
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 2.2e-63 246.5 229 55.9
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 2.9e-63 246.1 239 55.6
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 3.8e-63 245.7 263 53.2
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 1.1e-62 244.2 238 55.0
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.6e-61 240.4 239 54.4
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 1.6e-61 240.4 197 57.4
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 1.6e-61 240.4 229 54.1
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 1.0e-60 237.7 248 51.6
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 2.3e-60 236.5 235 53.2
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 5.1e-60 235.3 245 51.8
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 5.6e-59 231.9 264 49.6
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 1.6e-58 230.3 253 51.0
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 2.1e-58 229.9 285 48.1
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 2.8e-58 229.6 208 54.3
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 2.8e-58 229.6 208 54.3
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 2.8e-58 229.6 247 49.4
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 2.4e-57 226.5 234 51.3
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 7.6e-56 221.5 223 53.4
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 3.8e-55 219.2 178 56.7
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 7.1e-54 214.9 264 47.7
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 1.9e-51 206.8 451 32.8
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 3.3e-51 206.1 248 47.2
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 2.1e-50 203.4 215 53.0
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.3e-44 183.3 258 44.2
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 2.4e-41 173.3 137 56.2
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.6e-37 160.6 237 35.0
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 3.0e-36 156.4 263 42.6
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 1.9e-35 153.7 158 48.7
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 2.9e-31 139.8 93 68.8
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 3.8e-31 139.4 227 37.4
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 4.3e-27 125.9 156 50.0
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 6.9e-25 118.6 126 55.6
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 9.1e-25 118.2 263 37.3
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 3.8e-23 112.8 97 51.5
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.0e-19 100.5 132 43.9
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 3.1e-17 93.2 226 27.9
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.2e-16 91.3 229 30.6
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 7.7e-16 88.6 126 43.7
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 8.5e-15 85.1 131 37.4
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 1.1e-14 84.7 179 33.0
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 7.2e-14 82.0 110 49.1
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.2e-13 81.3 75 49.3
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.1e-13 80.5 93 54.8
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 3.3e-11 73.2 86 48.8
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 5.7e-11 72.4 87 48.3
Pp3c1_15160 Physcomitrium patens HOM05D000160 ORTHO05D316923 2.2e-10 70.5 142 26.8
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 1.7e-07 60.8 141 27.0
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 2.9e-07 60.1 55 40.0
Pp3c19_13839 Physcomitrium patens HOM05D006635 ORTHO05D008047 2.5e-06 57.0 96 33.3


User provided reference genes

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