Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G196400 Glycine max HOM05D004522 ORTHO05D005887 6.5e-162 573.9 279 100.0
Glyma.14G137100 Glycine max HOM05D004522 ORTHO05D005887 9.5e-153 543.5 280 95.0
VMungo0251G2701 Vigna mungo HOM05D004522 ORTHO05D005887 9.2e-148 526.9 279 90.0
Phvul.002G181900 Phaseolus vulgaris HOM05D004522 ORTHO05D005887 3.5e-147 525.0 279 90.0
Lalb_Chr22g0361201 Lupinus albus HOM05D004522 ORTHO05D005887 2.3e-138 495.7 279 83.2
arahy.Tifrunner.gnm1.ann1.IIX4FM Arachis hypogaea HOM05D004522 ORTHO05D005887 2.1e-136 489.2 281 84.3
arahy.Tifrunner.gnm1.ann1.696W46 Arachis hypogaea HOM05D004522 ORTHO05D005887 1.8e-135 486.1 281 84.0
Psat6g033360 Pisum sativum HOM05D004522 ORTHO05D005887 1.6e-131 473.0 279 78.9
Cfa013296 Carpinus fangiana HOM05D004522 ORTHO05D005887 5.1e-130 468.0 279 79.9
Hma1.2p1_0534F.1_g173690 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 4.7e-128 461.5 271 79.3
Hma1.2p1_1265F.1_g271353 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 4.7e-128 461.5 271 79.3
Dinv38803 Davidia involucrata HOM05D004522 ORTHO05D005887 1.1e-127 460.3 271 78.6
Lj5g0011494 Lotus japonicus HOM05D004522 ORTHO05D005887 1.8e-127 459.5 278 77.7
Prupe.1G457500 Prunus persica HOM05D004522 ORTHO05D005887 2.3e-127 459.1 280 77.5
Thecc.09G000400 Theobroma cacao HOM05D004522 ORTHO05D005887 2.3e-127 459.1 271 79.3
Dinv37488 Davidia involucrata HOM05D004522 ORTHO05D005887 4.0e-127 458.4 279 76.3
Gohir.A06G108300 Gossypium hirsutum HOM05D004522 ORTHO05D005887 8.9e-127 457.2 271 79.3
Eucgr.C02139 Eucalyptus grandis HOM05D004522 ORTHO05D005887 1.2e-126 456.8 273 78.8
Gorai.010G125500 Gossypium raimondii HOM05D004522 ORTHO05D005887 1.5e-126 456.4 271 79.0
Hma1.2p1_0495F.1_g165690 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 2.0e-126 456.1 271 77.9
Manes.03G000450 Manihot esculenta HOM05D004522 ORTHO05D005887 9.9e-126 453.8 272 77.9
CiPaw.07G210600 Carya illinoinensis HOM05D004522 ORTHO05D005887 1.3e-125 453.4 271 78.2
TWI63G0055 Tripterygium wilfordii HOM05D004522 ORTHO05D005887 1.7e-125 453.0 272 79.8
QL12p025652 Quercus lobata HOM05D004522 ORTHO05D005887 2.9e-125 452.2 271 78.6
RcHm_v2.0_Chr6g0305241 Rosa chinensis HOM05D004522 ORTHO05D005887 8.4e-125 450.7 280 76.4
TPR.G12110 Trifolium pratense HOM05D004522 ORTHO05D005887 8.4e-125 450.7 281 76.5
Ciclev10007345m.g Citrus clementina HOM05D004522 ORTHO05D005887 3.5e-123 445.3 271 77.9
Atru.chr7.2700 Acer truncatum HOM05D004522 ORTHO05D005887 4.6e-123 444.9 279 73.8
Ca_01520_v3 Cicer arietinum L. HOM05D004522 ORTHO05D005887 6.0e-123 444.5 253 82.2
CANSAT25G3238 Cannabis sativa HOM05D004522 ORTHO05D005887 1.3e-122 443.4 269 77.3
GSVIVG01035576001 Vitis vinifera HOM05D004522 ORTHO05D005887 2.3e-122 442.6 276 75.4
CSS0030659 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 3.9e-122 441.8 280 73.6
FvH4_2g36580 Fragaria vesca HOM05D004522 ORTHO05D005887 6.6e-122 441.0 279 75.3
Oeu005158.2 Olea europaea HOM05D004522 ORTHO05D005887 8.6e-122 440.7 277 75.5
Peaxi162Scf00036g01311 Petunia axillaris HOM05D004522 ORTHO05D005887 1.5e-121 439.9 272 76.1
ECA234G1339 Erigeron canadensis HOM05D004522 ORTHO05D005887 2.5e-121 439.1 276 74.3
Nitab4.5_0000844g0320 Nicotiana tabacum HOM05D004522 ORTHO05D005887 5.6e-121 438.0 272 75.0
MD08G1125900 Malus domestica HOM05D004522 ORTHO05D005887 7.3e-121 437.6 274 76.3
Solyc02g081910.2 Solanum lycopersicum HOM05D004522 ORTHO05D005887 9.6e-121 437.2 272 73.9
Sopen02g026540 Solanum pennellii HOM05D004522 ORTHO05D005887 9.6e-121 437.2 272 73.9
Actinidia21721 Actinidia chinensis HOM05D004522 ORTHO05D005887 1.2e-120 436.8 276 73.2
CAN.G809.41 Capsicum annuum HOM05D004522 ORTHO05D005887 6.2e-120 434.5 272 73.5
ClCG05G026380 Citrullus lanatus HOM05D004522 ORTHO05D005887 8.1e-120 434.1 279 74.2
FAN20G0828 Fragaria x ananassa HOM05D004522 ORTHO05D005887 8.1e-120 434.1 271 74.2
Sed0013871 Sechium edule HOM05D004522 ORTHO05D005887 2.4e-119 432.6 271 74.5
THA.LOC104819919 Tarenaya hassleriana HOM05D004522 ORTHO05D005887 8.9e-119 430.6 265 77.0
Haze_21779 Corylus avellana HOM05D004522 ORTHO05D005887 3.4e-118 428.7 258 79.1
FAN27G1482 Fragaria x ananassa HOM05D004522 ORTHO05D005887 3.4e-118 428.7 271 73.4
HanXRQChr16g0521121 Helianthus annuus HOM05D004522 ORTHO05D005887 3.4e-118 428.7 276 72.1
Aa31LG2G19110 Aethionema arabicum HOM05D004522 ORTHO05D005887 4.4e-118 428.3 274 73.7
Migut.C00355 Erythranthe guttata HOM05D004522 ORTHO05D005887 4.4e-118 428.3 272 74.6
COL.COLO4_18648 Corchorus olitorius HOM05D004522 ORTHO05D005887 1.7e-117 426.4 273 74.7
DCAR_006332 Daucus carota HOM05D004522 ORTHO05D005887 1.1e-116 423.7 281 70.1
Potri.006G279700 Populus trichocarpa HOM05D004522 ORTHO05D005887 1.1e-116 423.7 271 73.8
SalBow1G6309 Salvia bowleyana HOM05D004522 ORTHO05D005887 3.2e-116 422.2 276 71.4
Psat6g033400 Pisum sativum HOM05D004522 ORTHO05D005887 7.1e-116 421.0 272 74.6
EL10Ac2g03676 Beta vulgaris HOM05D004522 ORTHO05D005887 9.3e-116 420.6 271 70.5
Rhsim08G0228200 Rhododendron simsii HOM05D004522 ORTHO05D005887 1.7e-114 416.4 271 71.2
MD15G1105700 Malus domestica HOM05D004522 ORTHO05D005887 3.0e-114 415.6 276 72.1
Nn4g23566 Nelumbo nucifera HOM05D004522 ORTHO05D005887 5.1e-114 414.8 276 70.7
AUR62020658 Chenopodium quinoa HOM05D004522 ORTHO05D005887 1.1e-113 413.7 276 68.5
Medtr0245s0010 Medicago truncatula HOM05D004522 ORTHO05D005887 1.1e-113 413.7 278 72.3
TPR.G39482 Trifolium pratense HOM05D004522 ORTHO05D005887 1.9e-113 412.9 269 73.6
AUR62043895 Chenopodium quinoa HOM05D004522 ORTHO05D005887 4.3e-113 411.8 276 68.1
Aa31LG2G19120 Aethionema arabicum HOM05D004522 ORTHO05D005887 1.3e-112 410.2 275 72.7
SGA_v2.0_scaffold62G21366 Striga asiatica HOM05D004522 ORTHO05D005887 1.3e-112 410.2 277 69.7
C01p07770 Brassica napus HOM05D004522 ORTHO05D005887 1.6e-112 409.8 264 70.8
A01p07030 Brassica napus HOM05D004522 ORTHO05D005887 4.8e-112 408.3 264 70.5
BraA01t00655Z Brassica rapa HOM05D004522 ORTHO05D005887 4.8e-112 408.3 264 70.5
A03p60590 Brassica napus HOM05D004522 ORTHO05D005887 1.1e-111 407.1 284 68.7
Carub.0007s0933 Capsella rubella HOM05D004522 ORTHO05D005887 1.1e-111 407.1 277 68.6
BcaC09g51903 Brassica carinata HOM05D004522 ORTHO05D005887 1.4e-111 406.8 264 70.5
MELO3C003609.2 Cucumis melo HOM05D004522 ORTHO05D005887 1.8e-111 406.4 269 71.4
BolC1t00764H Brassica oleracea HOM05D004522 ORTHO05D005887 4.0e-111 405.2 264 70.1
BolC7t46304H Brassica oleracea HOM05D004522 ORTHO05D005887 6.9e-111 404.4 264 70.8
C07p58490 Brassica napus HOM05D004522 ORTHO05D005887 9.0e-111 404.1 264 70.8
CARHR239110 Cardamine hirsuta HOM05D004522 ORTHO05D005887 1.5e-110 403.3 273 68.1
Thhalv10024242m.g Eutrema salsugineum HOM05D004522 ORTHO05D005887 1.5e-110 403.3 285 66.0
Medtr1g009315 Medicago truncatula HOM05D004522 ORTHO05D005887 2.0e-110 402.9 278 71.2
BcaNung01535 Brassica carinata HOM05D004522 ORTHO05D005887 3.4e-110 402.1 264 70.8
Sp7g29090 Schrenkiella parvula HOM05D004522 ORTHO05D005887 3.4e-110 402.1 274 69.0
AT4G31210 Arabidopsis thaliana HOM05D004522 ORTHO05D005887 2.2e-109 399.4 273 68.1
PSO782G1701 Papaver somniferum HOM05D004522 ORTHO05D005887 2.2e-109 399.4 273 70.0
vmacro18846 Vaccinium macrocarpon HOM05D004522 ORTHO05D005887 2.9e-109 399.1 274 65.7
PSO063G2748 Papaver somniferum HOM05D004522 ORTHO05D005887 6.4e-109 397.9 273 69.6
unitig_60.g25825 Utricularia gibba HOM05D004522 ORTHO05D005887 1.1e-108 397.1 279 65.6
Ah.14g088390 Amaranthus hybridus HOM05D004522 ORTHO05D005887 3.2e-108 395.6 274 65.3
AL7G20870 Arabidopsis lyrata HOM05D004522 ORTHO05D005887 3.2e-108 395.6 263 68.1
Sed0008341 Sechium edule HOM05D004522 ORTHO05D005887 3.2e-108 395.6 260 70.8
Cc09_g04950 Coffea canephora HOM05D004522 ORTHO05D005887 2.3e-106 389.4 274 68.2
TAR629G0385 Trochodendron aralioides HOM05D004522 ORTHO05D005887 1.5e-105 386.7 272 66.5
Medtr1g009570 Medicago truncatula HOM05D004522 ORTHO05D005887 1.3e-104 383.6 277 67.5
RhsimUnG0118700 Rhododendron simsii HOM05D004522 ORTHO05D005887 1.3e-104 383.6 264 67.8
AUR62028071 Chenopodium quinoa HOM05D004522 ORTHO05D005887 2.1e-104 382.9 255 69.0
Aqoxy3G03771 Aquilegia oxysepala HOM05D004522 ORTHO05D005887 8.1e-104 380.9 274 66.1
Lj8C583T4 Lonicera japonica HOM05D004522 ORTHO05D005887 1.4e-103 380.2 246 72.8
Sabra06G0216700 Salix brachista HOM05D004522 ORTHO05D005887 3.1e-103 379.0 271 69.4
Hund03258 Selenicereus undatus HOM05D004522 ORTHO05D005887 3.1e-103 379.0 279 62.4
AUR62044451 Chenopodium quinoa HOM05D004522 ORTHO05D005887 9.9e-102 374.0 276 63.8
CsaV3_3G047220 Cucumis sativus L. HOM05D004522 ORTHO05D005887 2.2e-101 372.9 267 65.2
ATR0691G178 Amborella trichopoda HOM05D004522 ORTHO05D005887 2.4e-100 369.4 276 59.4
BraA03t15100Z Brassica rapa HOM05D004522 ORTHO05D005887 2.4e-100 369.4 236 71.6
Lsat_1_v5_gn_4_39420 Lactuca sativa HOM05D004522 ORTHO05D005887 5.5e-100 368.2 279 66.3
CANSAT54G0998 Cannabis sativa HOM05D004522 ORTHO05D005887 4.3e-97 358.6 253 69.2
Migut.E00600 Erythranthe guttata HOM05D004522 ORTHO05D005887 4.3e-97 358.6 266 64.7
vmacro20064 Vaccinium macrocarpon HOM05D004522 ORTHO05D005887 7.4e-97 357.8 236 69.9
Zm00001eb380580 Zea mays HOM05D004522 ORTHO05D005887 2.6e-94 349.4 271 59.8
Cpa.g.sc246.4 Carica papaya HOM05D004522 ORTHO05D005887 2.9e-93 345.9 279 64.2
CDE02G2996 Ceratophyllum demersum HOM05D004522 ORTHO05D005887 2.9e-93 345.9 274 60.2
Sc10g0004210 Simmondsia chinensis HOM05D004522 ORTHO05D005887 3.2e-92 342.4 221 73.3
Actinidia32105 Actinidia chinensis HOM05D004522 ORTHO05D005887 9.3e-92 340.9 271 62.0
Zm00001eb280820 Zea mays HOM05D004522 ORTHO05D005887 1.2e-91 340.5 276 58.0
PSO478G3803 Papaver somniferum HOM05D004522 ORTHO05D005887 5.3e-87 325.1 275 56.0
Gohir.D06G110400 Gossypium hirsutum HOM05D004522 ORTHO05D005887 7.6e-86 321.2 182 80.8
Medtr0229s0020 Medicago truncatula HOM05D004522 ORTHO05D005887 6.5e-77 291.6 206 68.9
HPP92_015554 Vanilla planifolia HOM05D004522 ORTHO05D005887 2.6e-73 279.6 304 48.0
PGSC0003DMG400012781 Solanum tuberosum HOM05D004522 ORTHO05D005887 1.5e-60 237.3 194 61.9
Pp3c23_11430 Physcomitrium patens HOM05D004522 ORTHO05D005887 3.6e-59 232.6 281 42.0
MBI16_g42310_MAGBIO Magnolia biondii HOM05D004522 ORTHO05D005887 6.7e-58 228.4 271 46.5
Nitab4.5_0011308g0020 Nicotiana tabacum HOM05D004522 ORTHO05D005887 1.3e-56 224.2 115 86.1
SEGI_38297 Sequoiadendron giganteum HOM05D004522 ORTHO05D005887 1.3e-56 224.2 213 49.3
Pp3c24_9990 Physcomitrium patens HOM05D004522 ORTHO05D005887 1.7e-56 223.8 283 42.0
Nitab4.5_0011308g0040 Nicotiana tabacum HOM05D004522 ORTHO05D005887 7.7e-54 214.9 158 65.2
Mapoly0025s0095 Marchantia polymorpha HOM05D004522 ORTHO05D005887 1.7e-53 213.8 280 40.0
AUR62013317 Chenopodium quinoa HOM05D004522 ORTHO05D008760 3.0e-50 203.0 115 76.5
AagrBONN_evm.TU.Sc2ySwM_228.692 Anthoceros agrestis HOM05D004522 ORTHO05D005887 4.4e-49 199.1 265 40.0
SMO304G0055 Selaginella moellendorffii HOM05D004522 ORTHO05D005887 1.2e-46 191.0 266 40.2
AUR62038716 Chenopodium quinoa HOM05D004522 ORTHO05D005887 4.9e-40 169.1 125 60.8
CBR_g22953 Chara braunii HOM05D004522 ORTHO05D005887 1.0e-34 151.4 321 31.5
MCO16G139 Micromonas commoda HOM05D004522 ORTHO05D005887 5.2e-26 122.5 284 29.6
PRCOL_00000349 Prasinoderma coloniale HOM05D004522 ORTHO05D005887 2.3e-21 107.1 234 29.5
CSS0024449 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 4.4e-17 92.8 75 62.7
Os06g0281400 Oryza sativa ssp. japonica HOM05D004522 ORTHO05D005887 7.5e-17 92.0 62 66.1
CSS0018701 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 1.3e-16 91.3 73 64.4
Cre10.g442850 Chlamydomonas reinhardtii HOM05D004522 ORTHO05D005887 8.6e-13 78.6 257 27.6
CSS0037923 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 5.6e-12 75.9 71 56.3
CSS0004825 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 2.8e-11 73.6 77 53.2
SMO014G0004 Selaginella moellendorffii HOM05D004522 ORTHO05D005887 6.0e-06 55.8 76 40.8


User provided reference genes

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