Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 0.0e+00 1097.8 556 100.0
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 2.3e-267 925.2 560 83.9
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 4.3e-266 921.0 560 83.8
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 2.8e-228 795.4 565 74.2
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 2.3e-227 792.3 558 73.5
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 5.4e-224 781.2 562 72.4
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 3.9e-222 775.0 562 72.2
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 1.4e-219 766.5 452 87.4
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 8.3e-217 757.3 559 71.0
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 1.6e-215 753.1 578 69.0
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 4.3e-213 745.0 566 70.5
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 4.4e-210 734.9 585 67.9
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 1.1e-165 587.4 530 58.5
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 7.2e-160 568.2 549 55.7
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 1.2e-159 567.4 556 56.1
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 5.1e-158 562.0 558 53.2
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 5.1e-158 562.0 591 53.1
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 6.7e-158 561.6 556 55.0
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 2.5e-157 559.7 707 46.4
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 2.2e-156 556.6 560 53.9
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 1.4e-155 553.9 556 53.4
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 5.9e-154 548.5 559 54.2
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 7.7e-154 548.1 545 55.6
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 1.7e-153 547.0 598 51.3
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 3.0e-150 536.2 561 54.0
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 4.8e-148 528.9 573 51.0
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 2.4e-147 526.6 558 51.6
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 7.7e-146 521.5 555 51.9
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 5.5e-144 515.4 551 50.6
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 2.1e-143 513.5 560 51.6
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 1.3e-140 504.2 603 49.1
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 2.8e-140 503.1 581 49.6
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 1.4e-139 500.7 547 49.5
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 1.8e-139 500.4 571 48.2
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 1.2e-138 497.7 562 49.6
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 4.5e-138 495.7 555 49.7
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 4.5e-138 495.7 581 50.3
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 2.2e-137 493.4 569 49.4
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 5.0e-137 492.3 535 51.8
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 5.0e-137 492.3 562 49.3
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 1.9e-136 490.3 574 49.8
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 4.2e-136 489.2 560 48.9
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 9.4e-136 488.0 555 48.5
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 1.2e-133 481.1 564 48.8
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 9.7e-133 478.0 570 49.5
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 1.3e-132 477.6 570 47.7
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 3.7e-132 476.1 562 47.7
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 4.8e-132 475.7 546 48.5
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 4.8e-132 475.7 571 47.8
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 2.4e-131 473.4 549 48.8
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.0e-130 470.3 577 48.0
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 2.0e-130 470.3 593 45.9
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 7.7e-130 468.4 561 47.6
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 6.5e-129 465.3 573 47.1
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 1.9e-128 463.8 553 47.6
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 7.2e-128 461.8 543 48.6
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 1.6e-127 460.7 548 48.0
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 2.1e-127 460.3 579 47.3
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 1.4e-126 457.6 547 49.0
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 3.0e-126 456.4 592 46.1
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 4.8e-124 449.1 548 46.7
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 6.3e-124 448.7 702 41.2
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 2.7e-122 443.4 525 47.0
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 5.0e-121 439.1 550 45.6
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 1.9e-120 437.2 538 47.2
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 7.2e-120 435.3 497 50.3
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 2.1e-119 433.7 477 51.6
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 3.0e-118 429.9 550 45.3
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 3.0e-118 429.9 582 45.4
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 2.0e-117 427.2 562 44.8
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 3.4e-117 426.4 547 46.8
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 4.4e-117 426.0 533 47.1
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 5.7e-117 425.6 563 43.9
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 2.2e-116 423.7 541 46.4
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 2.4e-115 420.2 514 47.9
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 2.0e-114 417.2 547 44.1
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 2.9e-113 413.3 517 48.5
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 9.5e-112 408.3 547 42.8
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 1.2e-111 407.9 544 45.6
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 2.1e-111 407.1 547 43.7
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 1.7e-108 397.5 566 43.6
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 3.7e-108 396.4 537 42.8
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 5.0e-105 386.0 578 41.9
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 3.1e-102 376.7 491 45.8
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 2.0e-101 374.0 503 45.7
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 2.1e-95 354.0 560 39.1
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 2.0e-93 347.4 557 37.5
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 3.2e-91 340.1 497 41.6
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 3.9e-89 333.2 334 50.0
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 3.1e-86 323.6 552 37.5
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 8.9e-86 322.0 417 47.0
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.2e-82 311.6 414 46.4
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 4.3e-80 303.1 489 40.5
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 6.4e-76 289.3 474 40.1
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.6e-74 284.6 436 41.1
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 1.0e-73 282.0 603 33.8
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.4e-69 266.9 423 41.4
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 2.2e-68 264.2 207 61.4
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 1.5e-64 251.5 471 37.4
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 1.4e-62 245.0 405 39.0
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 2.9e-60 237.3 537 32.6
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 3.5e-58 230.3 190 57.4
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 9.0e-54 215.7 208 54.8
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 1.2e-53 215.3 359 40.4
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.5e-48 198.4 148 64.2
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 5.7e-48 196.4 148 64.2
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 5.0e-44 183.3 119 74.8
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 7.9e-42 176.0 138 63.8
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 9.7e-40 169.1 119 66.4
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 4.8e-39 166.8 321 38.6
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 6.3e-39 166.4 588 28.4
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 6.5e-36 156.4 216 46.3
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 6.7e-33 146.4 632 25.9
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.7e-26 124.4 159 46.5
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 1.3e-15 89.0 85 57.6
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 1.6e-13 82.0 197 33.0
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.6e-13 82.0 59 64.4
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 5.0e-12 77.0 71 54.9
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 5.2e-09 67.0 61 49.2


User provided reference genes

Program Settings