Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 2.4e-142 508.8 257 100.0
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 1.1e-131 473.4 257 93.0
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 1.8e-121 439.5 258 86.8
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 7.7e-117 424.1 260 84.2
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 5.6e-99 364.8 264 70.5
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 3.6e-98 362.1 255 73.3
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 8.0e-98 360.9 255 71.4
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 1.5e-96 356.7 255 70.6
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 7.5e-96 354.4 249 71.5
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 3.7e-95 352.1 247 73.7
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 4.6e-93 345.1 250 71.6
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 4.3e-83 312.0 251 62.2
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.8e-81 306.6 255 62.4
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 1.8e-81 306.6 255 62.4
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 1.2e-80 303.9 249 61.4
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.4e-80 302.4 251 64.5
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 5.8e-80 301.6 255 62.0
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.1e-78 297.4 242 64.9
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 1.4e-78 297.0 252 59.9
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 5.4e-78 295.0 257 61.1
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 7.1e-78 294.7 252 59.5
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 9.2e-78 294.3 258 59.7
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 1.2e-77 293.9 244 61.1
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 1.6e-77 293.5 244 61.5
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 4.6e-77 292.0 240 61.2
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 6.0e-77 291.6 258 59.3
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.3e-76 290.4 254 61.8
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 3.0e-76 289.3 248 60.9
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 3.9e-76 288.9 256 57.4
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 1.5e-75 287.0 262 58.4
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.9e-75 286.6 256 59.0
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.5e-75 286.2 262 58.4
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 3.3e-75 285.8 236 62.3
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 3.3e-75 285.8 258 57.0
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 7.3e-75 284.6 265 58.1
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 7.3e-75 284.6 246 59.3
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 9.5e-75 284.3 222 64.0
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 9.5e-75 284.3 253 58.5
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.2e-74 283.9 262 58.0
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.6e-74 283.5 266 56.4
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 4.7e-74 282.0 288 54.9
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 4.7e-74 282.0 282 53.9
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 6.2e-74 281.6 245 58.4
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 3.1e-73 279.3 245 58.8
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 4.0e-73 278.9 266 55.6
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 6.8e-73 278.1 243 59.3
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 1.2e-72 277.3 261 58.2
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 4.4e-72 275.4 255 57.6
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 5.8e-72 275.0 245 57.6
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 6.4e-71 271.6 255 56.5
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 1.1e-70 270.8 258 56.6
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 2.4e-70 269.6 260 56.5
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 9.2e-70 267.7 211 60.2
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.1e-69 266.5 256 56.6
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.1e-69 266.5 256 56.6
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 2.7e-69 266.2 252 56.0
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 4.6e-69 265.4 233 56.2
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 4.6e-69 265.4 248 59.3
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 7.8e-69 264.6 212 61.3
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 1.0e-68 264.2 345 44.1
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 1.3e-68 263.8 251 54.6
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 1.7e-68 263.5 247 55.1
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.7e-68 263.5 239 58.2
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 3.9e-68 262.3 257 54.1
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 1.2e-66 257.3 270 51.5
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 1.6e-66 256.9 224 56.7
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 4.7e-66 255.4 250 54.0
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 4.7e-66 255.4 226 58.4
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 8.1e-66 254.6 229 57.2
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 1.8e-65 253.4 249 56.2
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 3.1e-65 252.7 243 54.7
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 2.0e-64 250.0 237 54.4
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 3.4e-64 249.2 302 47.4
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 7.6e-64 248.1 241 55.6
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 9.9e-64 247.7 239 55.6
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 2.2e-63 246.5 258 52.3
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 2.9e-63 246.1 240 53.8
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 8.4e-63 244.6 229 55.0
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 5.4e-62 241.9 235 54.0
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 7.1e-62 241.5 267 52.1
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 2.1e-61 240.0 242 53.3
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 2.7e-61 239.6 240 53.3
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 2.7e-61 239.6 197 57.4
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 2.7e-61 239.6 238 54.6
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 3.0e-60 236.1 259 51.0
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 8.7e-60 234.6 242 51.2
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 1.9e-59 233.4 264 49.2
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 9.6e-59 231.1 192 56.8
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 9.6e-59 231.1 192 56.8
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 1.6e-58 230.3 236 52.5
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 8.1e-58 228.0 282 47.9
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 3.8e-55 219.2 178 56.7
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 4.9e-55 218.8 264 48.5
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 8.4e-55 218.0 221 52.5
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 1.9e-51 206.8 451 32.6
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 5.6e-51 205.3 215 53.5
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.1e-50 203.4 253 46.2
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 7.9e-45 184.9 261 44.4
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 2.4e-41 173.3 137 56.2
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 8.4e-39 164.9 237 37.6
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 7.9e-37 158.3 260 42.3
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 1.9e-35 153.7 155 49.7
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 2.2e-31 140.2 247 36.8
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 8.5e-31 138.3 90 68.9
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.8e-28 130.6 156 51.3
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 7.4e-27 125.2 126 57.9
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 5.3e-25 119.0 262 38.2
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 3.8e-23 112.8 94 52.1
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 3.3e-19 99.8 216 31.9
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.4e-19 99.4 132 43.2
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.1e-17 94.7 202 30.2
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 5.3e-17 92.4 179 35.2
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 1.7e-15 87.4 119 43.7
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 3.8e-15 86.3 131 38.2
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 2.5e-14 83.6 75 50.7
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 4.7e-13 79.3 110 48.2
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 4.7e-13 79.3 93 53.8
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.0e-12 78.2 87 50.6
Pp3c1_15160 Physcomitrium patens HOM05D000160 ORTHO05D316923 1.8e-12 77.4 142 28.9
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 5.7e-11 72.4 86 48.8
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 3.1e-09 66.6 141 29.1
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 3.8e-07 59.7 55 40.0


User provided reference genes

Program Settings