Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 7.0e-240 833.9 560 100.0
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 3.2e-152 542.7 560 70.0
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 2.4e-147 526.6 558 72.4
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 7.2e-144 515.0 559 69.4
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 5.7e-141 505.4 538 61.5
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 5.4e-139 498.8 531 61.4
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 1.6e-138 497.3 560 63.2
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 2.9e-137 493.0 565 60.0
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 2.1e-135 486.9 560 66.8
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 8.0e-135 485.0 549 66.3
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 5.8e-133 478.8 540 69.8
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 3.7e-132 476.1 626 55.0
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 6.4e-132 475.3 561 65.8
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 2.3e-129 466.8 548 63.3
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 5.0e-129 465.7 493 64.7
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 4.3e-128 462.6 539 65.3
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 6.2e-127 458.8 556 66.9
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 6.2e-127 458.8 549 64.7
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 1.4e-126 457.6 578 63.8
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 8.9e-126 454.9 561 55.8
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 1.2e-125 454.5 538 55.4
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 5.8e-125 452.2 520 66.2
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 7.5e-125 451.8 544 64.5
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 1.0e-121 441.4 558 64.3
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 8.6e-121 438.3 471 70.5
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 2.5e-120 436.8 558 55.6
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 7.3e-120 435.3 517 57.8
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 3.6e-119 433.0 568 54.9
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 5.8e-117 425.6 545 63.9
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 2.9e-116 423.3 556 62.8
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 1.4e-115 421.0 548 56.0
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 5.4e-115 419.1 555 62.5
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 1.2e-114 417.9 455 72.7
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 1.9e-112 410.6 544 48.0
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 2.5e-112 410.2 588 58.3
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 5.6e-112 409.1 561 60.4
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 1.8e-110 404.1 471 66.0
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 3.1e-110 403.3 543 61.9
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 6.8e-110 402.1 471 69.4
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 8.9e-110 401.7 548 59.5
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 2.0e-109 400.6 557 63.4
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 1.1e-107 394.8 540 59.8
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 5.4e-107 392.5 466 59.0
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 2.7e-106 390.2 538 51.9
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 3.5e-106 389.8 497 56.5
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 5.1e-105 386.0 425 70.8
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 1.5e-104 384.4 468 53.2
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 1.9e-104 384.0 516 64.0
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 7.3e-104 382.1 550 56.9
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 9.6e-104 381.7 548 60.4
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 9.6e-104 381.7 539 48.8
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 1.2e-103 381.3 516 63.8
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 2.1e-103 380.6 516 64.3
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 6.9e-102 375.6 455 64.2
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 1.2e-101 374.8 471 52.4
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 1.5e-101 374.4 520 52.3
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 4.4e-101 372.9 471 52.2
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 3.8e-100 369.8 544 59.0
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 1.6e-98 364.4 546 59.3
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 1.6e-98 364.4 487 56.5
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 6.6e-97 359.0 477 54.7
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 3.3e-96 356.7 392 63.3
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 3.3e-96 356.7 471 50.7
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 9.6e-96 355.1 556 58.1
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 1.6e-95 354.4 534 59.4
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 1.4e-94 351.3 559 57.6
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 2.4e-94 350.5 558 55.6
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 6.9e-94 349.0 560 58.9
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 1.2e-93 348.2 560 55.4
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 2.6e-93 347.1 508 59.1
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 3.4e-93 346.7 552 56.3
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 1.3e-92 344.7 541 60.3
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 1.3e-92 344.7 467 58.7
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 1.7e-92 344.4 541 60.3
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 1.7e-92 344.4 538 59.5
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 2.2e-92 344.0 478 50.0
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 2.2e-92 344.0 558 49.8
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 3.8e-92 343.2 534 60.9
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 6.4e-92 342.4 561 44.9
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 8.4e-92 342.0 556 56.8
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 3.2e-91 340.1 551 55.5
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 6.0e-90 335.9 552 54.7
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 3.9e-89 333.2 464 65.1
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 8.7e-89 332.0 549 50.1
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 2.5e-88 330.5 560 57.1
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 1.3e-87 328.2 551 54.6
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 2.1e-87 327.4 480 60.8
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 2.1e-87 327.4 485 53.4
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.4e-86 324.7 473 42.9
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.8e-86 324.3 574 39.5
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 3.4e-85 320.1 472 52.5
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 9.9e-85 318.5 547 38.8
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 1.3e-84 318.2 535 49.0
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 3.3e-80 303.5 565 49.4
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 2.0e-77 294.3 470 51.9
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 3.4e-77 293.5 516 48.3
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 2.5e-75 287.3 548 50.7
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 1.6e-74 284.6 327 60.2
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 4.1e-70 270.0 446 50.2
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 1.5e-69 268.1 353 59.2
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 1.0e-68 265.4 282 67.0
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 4.2e-67 260.0 508 51.2
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 5.7e-64 249.6 242 55.8
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 3.7e-63 246.9 300 62.7
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 2.6e-48 197.6 211 52.1
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 5.9e-45 186.4 203 69.0
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 6.7e-41 172.9 342 45.0
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 8.3e-39 166.0 461 31.7
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 2.7e-37 161.0 126 66.7
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 5.5e-35 153.3 418 32.8
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.2e-32 145.6 96 69.8
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 2.0e-32 144.8 114 64.0
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 5.9e-29 133.3 157 49.7
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 5.9e-29 133.3 331 27.5
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 3.3e-27 127.5 93 65.6
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 6.8e-25 119.8 85 70.6
Lj1A1021T50 Lonicera japonica HOM05D005626 ORTHO05D007372 3.4e-24 117.5 149 45.6
Lj1C1019T10 Lonicera japonica HOM05D005626 ORTHO05D007372 4.1e-22 110.5 84 66.7
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 5.4e-22 110.2 341 26.1
MD07G1293400 Malus domestica HOM05D005626 ORTHO05D007372 2.3e-17 94.7 73 71.2
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 2.0e-16 91.7 317 35.6
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 6.4e-15 86.7 134 38.8
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 2.4e-14 84.7 60 70.0
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 1.2e-13 82.4 84 47.6
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 1.6e-13 82.0 115 40.9
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 3.5e-13 80.9 170 31.2
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 2.3e-12 78.2 133 33.1
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 1.9e-11 75.1 58 65.5
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 2.5e-11 74.7 94 47.9
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 2.5e-11 74.7 54 64.8
QL09p008133 Quercus lobata HOM05D005626 ORTHO05D007372 1.1e-09 69.3 40 80.0
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 2.6e-08 64.7 41 70.7


User provided reference genes

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