Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033401001 Vitis vinifera HOM05D004151 ORTHO05D004775 1.5e-77 293.1 169 100.0
Ah.06g191800 Amaranthus hybridus HOM05D004151 ORTHO05D004775 1.5e-56 223.4 175 80.6
TAR369G0512 Trochodendron aralioides HOM05D004151 ORTHO05D004775 1.5e-56 223.4 179 77.7
Cfa016441 Carpinus fangiana HOM05D004151 ORTHO05D004775 1.6e-55 219.9 178 77.5
Dinv37014 Davidia involucrata HOM05D004151 ORTHO05D004775 1.6e-55 219.9 176 75.6
TWI32G1207 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 1.6e-55 219.9 177 80.8
PSO063G0165 Papaver somniferum HOM05D004151 ORTHO05D004775 2.1e-55 219.5 152 82.2
PSO782G4796 Papaver somniferum HOM05D004151 ORTHO05D004775 2.1e-55 219.5 145 85.5
Cc06_g22960 Coffea canephora HOM05D004151 ORTHO05D004775 4.7e-55 218.4 183 76.5
Peaxi162Scf00003g04832 Petunia axillaris HOM05D004151 ORTHO05D004775 6.2e-55 218.0 147 78.9
Manes.09G141400 Manihot esculenta HOM05D004151 ORTHO05D004775 1.4e-54 216.9 168 83.9
Manes.08G144000 Manihot esculenta HOM05D004151 ORTHO05D004775 1.8e-54 216.5 170 82.4
THA.LOC104827273 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 5.2e-54 214.9 172 81.4
CiPaw.09G001900 Carya illinoinensis HOM05D004151 ORTHO05D004775 6.8e-54 214.5 171 80.7
Lalb_Chr14g0364491 Lupinus albus HOM05D004151 ORTHO05D004775 6.8e-54 214.5 171 79.5
CsaV3_4G013280 Cucumis sativus L. HOM05D004151 ORTHO05D004775 1.2e-53 213.8 163 82.8
Sc25g0004980 Simmondsia chinensis HOM05D004151 ORTHO05D004775 1.5e-53 213.4 167 79.6
Sed0025621 Sechium edule HOM05D004151 ORTHO05D004775 2.0e-53 213.0 168 73.8
MSTRG.19934 Avicennia marina HOM05D004151 ORTHO05D004775 4.4e-53 211.8 172 80.8
CARHR078040 Cardamine hirsuta HOM05D004151 ORTHO05D004775 5.8e-53 211.5 167 71.9
Lalb_Chr22g0359191 Lupinus albus HOM05D004151 ORTHO05D004775 5.8e-53 211.5 179 76.5
Nitab4.5_0007542g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 5.8e-53 211.5 153 75.2
ClCG04G005310 Citrullus lanatus HOM05D004151 ORTHO05D004775 1.3e-52 210.3 178 78.7
Haze_19418 Corylus avellana HOM05D004151 ORTHO05D004775 1.3e-52 210.3 153 77.8
Haze_19447 Corylus avellana HOM05D004151 ORTHO05D004775 1.3e-52 210.3 153 77.8
MD00G1189600 Malus domestica HOM05D004151 ORTHO05D004775 1.3e-52 210.3 145 79.3
MD05G1045500 Malus domestica HOM05D004151 ORTHO05D004775 1.3e-52 210.3 143 81.8
HPP92_021240 Vanilla planifolia HOM05D004151 ORTHO05D004775 1.3e-52 210.3 175 78.3
SGA_v2.0_scaffold274G46513 Striga asiatica HOM05D004151 ORTHO05D004775 2.2e-52 209.5 165 73.9
Thecc.05G294500 Theobroma cacao HOM05D004151 ORTHO05D004775 2.2e-52 209.5 172 78.5
Nitab4.5_0009048g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 2.9e-52 209.1 168 80.4
Solyc10g078540.3 Solanum lycopersicum HOM05D004151 ORTHO05D004775 2.9e-52 209.1 146 80.8
Sopen10g029190 Solanum pennellii HOM05D004151 ORTHO05D004775 2.9e-52 209.1 146 80.8
Ah.13g075350 Amaranthus hybridus HOM05D004151 ORTHO05D004775 6.4e-52 208.0 155 78.1
Dinv14579 Davidia involucrata HOM05D004151 ORTHO05D004775 6.4e-52 208.0 185 73.0
Nn7g35851 Nelumbo nucifera HOM05D004151 ORTHO05D004775 6.4e-52 208.0 169 80.5
Duzib106G1401 Durio zibethinus HOM05D004151 ORTHO05D004775 8.3e-52 207.6 172 77.9
Lj1g0021266 Lotus japonicus HOM05D004151 ORTHO05D004775 8.3e-52 207.6 180 76.1
PGSC0003DMG400008366 Solanum tuberosum HOM05D004151 ORTHO05D004775 8.3e-52 207.6 146 80.1
MELO3C008801.2 Cucumis melo HOM05D004151 ORTHO05D004775 1.9e-51 206.5 170 78.8
Oeu059999.1 Olea europaea HOM05D004151 ORTHO05D004775 1.9e-51 206.5 173 73.4
BraA01t04550Z Brassica rapa HOM05D004151 ORTHO05D004775 2.4e-51 206.1 180 75.6
Atru.chr5.2062 Acer truncatum HOM05D004151 ORTHO05D004775 3.2e-51 205.7 174 79.3
A01p41270 Brassica napus HOM05D004151 ORTHO05D004775 3.2e-51 205.7 180 76.1
BNapus_Darmor_BZH_scaffold_78p00440 Brassica napus HOM05D004151 ORTHO05D004775 3.2e-51 205.7 180 76.1
CDE06G0359 Ceratophyllum demersum HOM05D004151 ORTHO05D004775 3.2e-51 205.7 144 79.2
FvH4_1g30320 Fragaria vesca HOM05D004151 ORTHO05D004775 3.2e-51 205.7 146 80.8
Aqoxy1G00486 Aquilegia oxysepala HOM05D004151 ORTHO05D004775 7.1e-51 204.5 174 78.2
Glyma.16G041400 Glycine max HOM05D004151 ORTHO05D004775 9.2e-51 204.1 150 78.7
Prupe.8G064800 Prunus persica HOM05D004151 ORTHO05D004775 9.2e-51 204.1 175 79.4
BolC1t05799H Brassica oleracea HOM05D004151 ORTHO05D004775 1.2e-50 203.8 180 70.0
TPR.G5895 Trifolium pratense HOM05D004151 ORTHO05D004775 1.2e-50 203.8 177 75.1
PSO384G0229 Papaver somniferum HOM05D004151 ORTHO05D004775 1.6e-50 203.4 150 78.0
Hund24835 Selenicereus undatus HOM05D004151 ORTHO05D004775 1.6e-50 203.4 177 75.1
Hma1.2p1_0134F.1_g061640 Hydrangea macrophylla HOM05D004151 ORTHO05D004775 2.1e-50 203.0 163 73.0
CANSAT78G0749 Cannabis sativa HOM05D004151 ORTHO05D004775 3.5e-50 202.2 184 69.0
FAN28G2413 Fragaria x ananassa HOM05D004151 ORTHO05D004775 3.5e-50 202.2 135 84.4
SalBow5G4201 Salvia bowleyana HOM05D004151 ORTHO05D004775 3.5e-50 202.2 142 78.9
Atru.chr5.2060 Acer truncatum HOM05D004151 ORTHO05D004775 4.6e-50 201.8 174 78.7
Os11g0579800 Oryza sativa ssp. japonica HOM05D004151 ORTHO05D004775 4.6e-50 201.8 154 75.3
PSO339G5713 Papaver somniferum HOM05D004151 ORTHO05D004775 6.0e-50 201.4 141 80.1
RcHm_v2.0_Chr3g0490211 Rosa chinensis HOM05D004151 ORTHO05D004775 7.8e-50 201.1 170 71.2
Migut.J01888 Erythranthe guttata HOM05D004151 ORTHO05D004775 1.0e-49 200.7 150 77.3
Gorai.004G244500 Gossypium raimondii HOM05D004151 ORTHO05D004775 1.0e-49 200.7 170 77.6
A03p08690 Brassica napus HOM05D004151 ORTHO05D004775 1.3e-49 200.3 185 68.1
Gohir.A08G213200 Gossypium hirsutum HOM05D004151 ORTHO05D004775 1.3e-49 200.3 172 76.7
BcaNung05745 Brassica carinata HOM05D004151 ORTHO05D004775 1.7e-49 199.9 172 69.8
FAN19G1796 Fragaria x ananassa HOM05D004151 ORTHO05D004775 2.3e-49 199.5 146 78.1
FAN26G2823 Fragaria x ananassa HOM05D004151 ORTHO05D004775 2.3e-49 199.5 146 78.1
Phvul.001G110400 Phaseolus vulgaris HOM05D004151 ORTHO05D004775 2.3e-49 199.5 157 73.9
Thhalv10014755m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 3.0e-49 199.1 151 74.2
Sabra13G0051900 Salix brachista HOM05D004151 ORTHO05D004775 3.0e-49 199.1 180 71.1
Gohir.D08G230300 Gossypium hirsutum HOM05D004151 ORTHO05D004775 3.9e-49 198.7 170 77.1
unitig_21.g20195 Utricularia gibba HOM05D004151 ORTHO05D004775 3.9e-49 198.7 150 78.7
THA.LOC104802867 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 5.1e-49 198.4 149 77.2
Zm00001eb200450 Zea mays HOM05D004151 ORTHO05D004775 5.1e-49 198.4 154 71.4
Psat0s1971g0280 Pisum sativum HOM05D004151 ORTHO05D004775 6.6e-49 198.0 182 76.4
Gohir.D11G310400 Gossypium hirsutum HOM05D004151 ORTHO05D004775 8.6e-49 197.6 142 78.2
Gorai.007G343400 Gossypium raimondii HOM05D004151 ORTHO05D004775 8.6e-49 197.6 142 78.2
Medtr7g085640 Medicago truncatula HOM05D004151 ORTHO05D004775 8.6e-49 197.6 184 71.2
PGR142G1491 Punica granatum HOM05D004151 ORTHO05D004775 8.6e-49 197.6 169 78.7
BcaNung05743 Brassica carinata HOM05D004151 ORTHO05D004775 1.1e-48 197.2 181 72.4
FAN23G0170 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.1e-48 197.2 146 77.4
Glyma.19G110900 Glycine max HOM05D004151 ORTHO05D004775 1.1e-48 197.2 187 72.7
Sp3g02890 Schrenkiella parvula HOM05D004151 ORTHO05D004775 1.1e-48 197.2 155 73.5
Aa31LG11G11430 Aethionema arabicum HOM05D004151 ORTHO05D004775 1.5e-48 196.8 154 74.7
CARHR194880 Cardamine hirsuta HOM05D004151 ORTHO05D004775 1.9e-48 196.4 189 62.4
Sed0023399 Sechium edule HOM05D004151 ORTHO05D004775 1.9e-48 196.4 152 77.6
VMungo1383G2477 Vigna mungo HOM05D004151 ORTHO05D004775 1.9e-48 196.4 159 70.4
BolC3t13499H Brassica oleracea HOM05D004151 ORTHO05D004775 2.5e-48 196.1 181 70.2
Carub.0003s0316 Capsella rubella HOM05D004151 ORTHO05D004775 2.5e-48 196.1 159 73.0
Gohir.A11G296500 Gossypium hirsutum HOM05D004151 ORTHO05D004775 2.5e-48 196.1 142 77.5
SEGI_32651 Sequoiadendron giganteum HOM05D004151 ORTHO05D004775 2.5e-48 196.1 153 73.2
AL6G29380 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 3.3e-48 195.7 143 80.4
Duzib177G0709 Durio zibethinus HOM05D004151 ORTHO05D004775 3.3e-48 195.7 174 77.0
Sp6g26140 Schrenkiella parvula HOM05D004151 ORTHO05D004775 3.3e-48 195.7 154 75.3
Aa31LG5G14500 Aethionema arabicum HOM05D004151 ORTHO05D004775 4.3e-48 195.3 180 73.9
Thhalv10021561m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 5.6e-48 194.9 166 68.1
QL07p019530 Quercus lobata HOM05D004151 ORTHO05D004775 7.3e-48 194.5 154 74.7
TWI34G0161 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 7.3e-48 194.5 183 73.2
Oeu049600.1 Olea europaea HOM05D004151 ORTHO05D004775 1.6e-47 193.4 178 71.9
COL.COLO4_13597 Corchorus olitorius HOM05D004151 ORTHO05D004775 2.1e-47 193.0 143 76.9
ATR0697G007 Amborella trichopoda HOM05D004151 ORTHO05D004775 2.8e-47 192.6 141 77.3
AT5G18180 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 2.8e-47 192.6 148 76.4
AT3G03920 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 3.6e-47 192.2 185 68.1
BcaC03g13582 Brassica carinata HOM05D004151 ORTHO05D004775 3.6e-47 192.2 176 67.0
BolC2t06882H Brassica oleracea HOM05D004151 ORTHO05D004775 3.6e-47 192.2 176 67.0
AL3G13810 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 6.2e-47 191.4 161 72.0
Potri.013G058400 Populus trichocarpa HOM05D004151 ORTHO05D004775 6.2e-47 191.4 164 67.7
HanXRQChr08g0216931 Helianthus annuus HOM05D004151 ORTHO05D004775 8.1e-47 191.0 183 72.7
BcaB01g05179 Brassica carinata HOM05D004151 ORTHO05D004775 1.1e-46 190.7 181 69.1
C03p10140 Brassica napus HOM05D004151 ORTHO05D004775 1.1e-46 190.7 181 69.1
BraA03t10192Z Brassica rapa HOM05D004151 ORTHO05D004775 1.1e-46 190.7 181 69.1
arahy.Tifrunner.gnm1.ann1.JDMG7B Arachis hypogaea HOM05D004151 ORTHO05D004775 1.8e-46 189.9 182 72.0
arahy.Tifrunner.gnm1.ann1.PLSY77 Arachis hypogaea HOM05D004151 ORTHO05D004775 1.8e-46 189.9 182 72.0
Potri.019G034900 Populus trichocarpa HOM05D004151 ORTHO05D004775 1.8e-46 189.9 157 71.3
Zm00001eb114360 Zea mays HOM05D004151 ORTHO05D004775 2.4e-46 189.5 192 58.9
EL10Ac3g06820 Beta vulgaris HOM05D004151 ORTHO05D004775 3.1e-46 189.1 147 72.8
AUR62032690 Chenopodium quinoa HOM05D004151 ORTHO05D004775 4.0e-46 188.7 146 73.3
Actinidia22083 Actinidia chinensis HOM05D004151 ORTHO05D004775 6.8e-46 188.0 171 74.9
C02p09730 Brassica napus HOM05D004151 ORTHO05D004775 6.8e-46 188.0 176 65.9
Carub.0006s1646 Capsella rubella HOM05D004151 ORTHO05D004775 6.8e-46 188.0 154 73.4
CSS0045523 Camellia sinensis var. sinensis HOM05D004151 ORTHO05D004775 2.0e-45 186.4 182 70.9
Pp3c25_15020 Physcomitrium patens HOM05D004151 ORTHO05D004775 2.0e-45 186.4 109 78.0
Peaxi162Scf00076g01048 Petunia axillaris HOM05D004151 ORTHO05D004775 3.4e-45 185.7 148 77.0
Lsat_1_v5_gn_8_24760 Lactuca sativa HOM05D004151 ORTHO05D004775 4.4e-45 185.3 178 71.9
Mapoly0086s0024 Marchantia polymorpha HOM05D004151 ORTHO05D004775 9.9e-45 184.1 111 75.7
HanXRQChr07g0204461 Helianthus annuus HOM05D004151 ORTHO05D004775 1.3e-44 183.7 141 73.8
Lsat_1_v5_gn_8_145841 Lactuca sativa HOM05D004151 ORTHO05D004775 1.3e-44 183.7 160 68.8
vmacro09141 Vaccinium macrocarpon HOM05D004151 ORTHO05D004775 2.2e-44 183.0 155 71.0
A02p04770 Brassica napus HOM05D004151 ORTHO05D004775 4.9e-44 181.8 174 67.2
BraA02t05436Z Brassica rapa HOM05D004151 ORTHO05D004775 4.9e-44 181.8 175 63.4
ECA233G5487 Erigeron canadensis HOM05D004151 ORTHO05D004775 4.9e-44 181.8 182 59.9
Rhsim04G0087500 Rhododendron simsii HOM05D004151 ORTHO05D004775 1.4e-43 180.3 158 67.1
BcaB05g23300 Brassica carinata HOM05D004151 ORTHO05D004775 4.2e-43 178.7 155 69.7
AagrBONN_evm.TU.Sc2ySwM_362.2901 Anthoceros agrestis HOM05D004151 ORTHO05D004775 5.4e-43 178.3 155 67.1
Cpa.g.sc51.114 Carica papaya HOM05D004151 ORTHO05D004775 5.4e-43 178.3 90 92.2
Pp3c5_28430 Physcomitrium patens HOM05D004151 ORTHO05D004775 7.1e-43 177.9 149 68.5
Cre13.g567850 Chlamydomonas reinhardtii HOM05D004151 ORTHO05D004775 1.2e-42 177.2 156 66.7
Sabra19G0042500 Salix brachista HOM05D004151 ORTHO05D004775 1.2e-42 177.2 140 74.3
Sabra19G0044800 Salix brachista HOM05D004151 ORTHO05D004775 1.2e-42 177.2 140 74.3
CAN.G960.49 Capsicum annuum HOM05D004151 ORTHO05D004775 7.8e-42 174.5 95 86.3
CBR_g48747 Chara braunii HOM05D004151 ORTHO05D004775 1.0e-41 174.1 130 72.3
COL.COLO4_13598 Corchorus olitorius HOM05D004151 ORTHO05D004775 1.1e-40 170.6 156 65.4
Nitab4.5_0004844g0050 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.1e-40 170.6 89 89.9
Nitab4.5_0002769g0090 Nicotiana tabacum HOM05D004151 ORTHO05D004775 3.3e-40 169.1 151 69.5
Ca_08267_v3 Cicer arietinum L. HOM05D004151 ORTHO05D004775 9.6e-40 167.5 89 87.6
Hund19236 Selenicereus undatus HOM05D004151 ORTHO05D004775 1.2e-39 167.2 125 69.6
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 9.0e-38 161.0 101 86.1
BolC2t11912H Brassica oleracea HOM05D004151 ORTHO05D004775 1.7e-33 146.7 129 62.0
MCO13G219 Micromonas commoda HOM05D004151 ORTHO05D004775 1.7e-33 146.7 125 66.4
SMO347G0554 Selaginella moellendorffii HOM05D004151 ORTHO05D004775 4.8e-31 138.7 166 62.0
C09p58800 Brassica napus HOM05D004151 ORTHO05D004775 6.9e-30 134.8 80 75.0
BraA10t42874Z Brassica rapa HOM05D004151 ORTHO05D004775 1.2e-29 134.0 102 68.6
PRCOL_00005119 Prasinoderma coloniale HOM05D005848 ORTHO05D007532 1.9e-27 126.7 76 71.1
unitig_744.g24550 Utricularia gibba HOM05D004151 ORTHO05D004775 7.1e-27 124.8 80 82.5
C02p58510 Brassica napus HOM05D004151 ORTHO05D004775 1.1e-24 117.5 95 62.1
Actinidia30553 Actinidia chinensis HOM05D004151 ORTHO05D004775 2.8e-23 112.8 89 82.0
Haze_27090 Corylus avellana HOM05D000590 ORTHO05D004775 3.4e-21 105.9 100 49.0
Oeu035726.1 Olea europaea HOM05D004151 ORTHO05D004775 5.5e-19 98.6 101 58.4
Oeu035720.1 Olea europaea HOM05D004151 ORTHO05D004775 9.3e-19 97.8 101 58.4
Zm00001eb274230 Zea mays HOM05D004151 ORTHO05D004775 2.7e-18 96.3 49 85.7
HanXRQChr05g0143841 Helianthus annuus HOM05D004151 ORTHO05D004775 4.6e-18 95.5 165 54.5
Atru.chr10.1764 Acer truncatum HOM05D004151 ORTHO05D004775 1.8e-14 83.6 66 72.7
Atru.chr5.2304 Acer truncatum HOM05D004151 ORTHO05D004775 1.8e-14 83.6 66 72.7
Atru.chr6.7 Acer truncatum HOM05D004151 ORTHO05D004775 6.9e-14 81.6 66 71.2
Atru.chr13.534 Acer truncatum HOM05D004151 ORTHO05D004775 1.5e-13 80.5 66 71.2
Atru.chr2.3197 Acer truncatum HOM05D004151 ORTHO05D004775 1.5e-13 80.5 66 71.2
Atru.chr4.2011 Acer truncatum HOM05D004151 ORTHO05D004775 1.5e-13 80.5 66 71.2
BcaB08g36698 Brassica carinata HOM05D004151 ORTHO05D004775 1.0e-09 67.8 39 82.1
ECA246G0128 Erigeron canadensis HOM05D001659 ORTHO05D001659 1.8e-06 57.0 35 68.6


User provided reference genes

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