Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 1.4e-291 1005.7 596 100.0
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 8.2e-178 627.9 599 57.3
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 4.3e-171 605.5 621 55.4
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 9.0e-169 597.8 583 59.7
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 1.3e-167 594.0 594 55.1
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 1.4e-166 590.5 596 55.4
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 6.1e-165 585.1 625 57.0
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 8.2e-162 574.7 595 53.8
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 2.2e-159 566.6 595 54.1
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 3.8e-159 565.8 597 54.4
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 3.6e-157 559.3 736 50.1
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 4.7e-157 558.9 578 54.3
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 4.7e-157 558.9 562 60.1
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 1.0e-156 557.8 595 54.3
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 8.8e-156 554.7 595 58.2
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 1.1e-155 554.3 590 56.3
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 5.7e-155 552.0 598 51.3
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 7.0e-153 545.0 597 50.4
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 3.5e-152 542.7 597 52.1
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 5.9e-152 542.0 600 50.5
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 2.2e-151 540.0 608 50.3
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 2.2e-151 540.0 587 51.3
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 6.5e-151 538.5 587 51.4
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 4.2e-150 535.8 602 56.1
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 5.5e-150 535.4 600 50.5
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 9.4e-150 534.6 593 50.3
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 1.6e-149 533.9 593 49.6
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 2.7e-149 533.1 609 51.1
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 4.7e-149 532.3 598 50.8
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 1.0e-148 531.2 600 50.3
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 5.2e-148 528.9 596 51.5
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 4.4e-147 525.8 598 52.2
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 4.4e-147 525.8 594 52.5
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 1.3e-146 524.2 599 50.6
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 1.1e-145 521.2 608 49.0
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 3.1e-145 519.6 597 48.9
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 5.3e-145 518.8 596 49.7
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 7.0e-145 518.5 597 49.9
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 4.5e-144 515.8 606 50.7
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.9e-143 513.1 595 49.7
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 1.2e-141 507.7 615 47.5
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 3.6e-141 506.1 542 54.2
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 1.0e-140 504.6 578 49.7
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 4.0e-140 502.7 593 48.6
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 8.8e-140 501.5 642 46.9
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 4.5e-136 489.2 617 46.8
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 2.2e-135 486.9 739 43.0
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 2.9e-135 486.5 589 48.7
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 1.5e-134 484.2 622 46.3
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 5.5e-134 482.3 563 50.1
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 2.7e-133 479.9 598 47.5
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 3.6e-133 479.6 653 43.6
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 6.8e-132 475.3 599 47.9
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 8.8e-132 474.9 575 49.2
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 2.0e-131 473.8 605 46.6
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 2.6e-131 473.4 526 51.9
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 3.4e-131 473.0 599 46.2
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 3.4e-131 473.0 598 46.8
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 3.7e-130 469.5 606 45.5
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 3.7e-130 469.5 608 45.9
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 4.1e-129 466.1 604 45.2
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 5.4e-129 465.7 607 46.0
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 1.6e-128 464.2 597 46.1
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 1.6e-128 464.2 599 46.1
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 7.7e-128 461.8 596 49.3
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.7e-127 460.7 596 48.3
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 3.8e-127 459.5 604 44.9
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 1.6e-125 454.1 579 46.8
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 5.2e-124 449.1 635 43.3
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 1.2e-123 448.0 602 44.7
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 3.4e-123 446.4 567 48.1
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.2e-120 438.0 568 47.9
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 9.5e-118 428.3 600 43.2
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 6.1e-117 425.6 599 42.7
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 1.0e-116 424.9 603 44.1
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 7.5e-115 418.7 542 47.0
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 2.2e-114 417.2 612 41.3
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 4.9e-114 416.0 522 46.9
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 1.4e-113 414.5 601 41.9
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 3.2e-113 413.3 596 41.4
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 9.2e-113 411.8 595 44.0
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 3.9e-111 406.4 546 46.0
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 1.1e-110 404.8 613 40.9
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 1.4e-105 387.9 493 46.5
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 3.5e-104 383.3 596 40.3
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 1.9e-102 377.5 602 37.7
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 3.7e-98 363.2 597 39.5
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 1.1e-97 361.7 540 38.1
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.8e-93 347.1 454 46.3
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 2.0e-91 340.9 601 37.6
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 8.4e-90 335.5 334 51.5
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 1.8e-84 317.8 529 48.2
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 5.4e-81 306.2 478 41.8
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 8.7e-79 298.9 599 35.4
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 2.5e-78 297.4 208 68.8
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 6.9e-76 289.3 447 43.4
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 9.0e-76 288.9 496 39.9
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 2.6e-75 287.3 371 46.9
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 6.7e-71 272.7 459 40.1
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 4.5e-67 260.0 192 65.1
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 2.5e-65 254.2 445 38.4
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 5.1e-63 246.5 211 61.6
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 8.2e-61 239.2 148 77.0
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 5.3e-60 236.5 148 76.4
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 7.6e-59 232.6 378 41.5
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 1.1e-57 228.8 579 32.1
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 7.7e-51 206.1 138 71.7
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.0e-47 195.7 319 48.3
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.8e-44 184.9 119 73.1
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 4.7e-40 170.2 264 49.6
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 5.0e-34 150.2 621 25.6
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 2.5e-33 147.9 365 31.0
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 5.5e-33 146.7 121 60.3
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 6.5e-26 123.2 159 46.5
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 3.4e-22 110.9 86 72.1
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 1.5e-17 95.5 71 67.6
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 8.0e-16 89.7 65 66.2
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 3.0e-15 87.8 202 31.2
Cfa006566 Carpinus fangiana HOM05D003924 ORTHO05D043563 4.3e-09 67.4 60 61.7
Dinv24123 Davidia involucrata HOM05D006560 ORTHO05D008164 8.9e-07 59.7 30 80.0
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.5e-06 58.9 57 50.9


User provided reference genes

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