Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031305001 Vitis vinifera HOM05D005824 ORTHO05D007029 0.0e+00 1291.6 660 100.0
QL07p026733 Quercus lobata HOM05D005824 ORTHO05D007029 8.6e-245 850.5 663 67.4
CSS0029355 Camellia sinensis var. sinensis HOM05D005824 ORTHO05D007029 9.8e-241 837.0 663 65.6
Dinv24497 Davidia involucrata HOM05D005824 ORTHO05D007029 7.0e-239 830.9 660 65.5
CiPaw.10G020000 Carya illinoinensis HOM05D005824 ORTHO05D007029 2.0e-230 802.7 665 63.0
Cfa020078 Carpinus fangiana HOM05D005824 ORTHO05D007029 5.0e-229 798.1 664 64.2
Rhsim11G0099700 Rhododendron simsii HOM05D005824 ORTHO05D007029 2.8e-219 765.8 662 61.8
Lalb_Chr02g0154321 Lupinus albus HOM05D005824 ORTHO05D007029 1.2e-214 750.4 723 56.4
Potri.015G010900 Populus trichocarpa HOM05D005824 ORTHO05D007029 1.6e-214 750.0 723 56.2
Sabra15G0009000 Salix brachista HOM05D005824 ORTHO05D007029 3.0e-213 745.7 733 55.9
Haze_20113 Corylus avellana HOM05D005824 ORTHO05D007029 5.1e-213 745.0 728 56.9
Sopen01g044470 Solanum pennellii HOM05D005824 ORTHO05D007029 5.2e-210 734.9 666 58.9
Nitab4.5_0009690g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 8.9e-210 734.2 672 59.1
VMungo0720G2244 Vigna mungo HOM05D005824 ORTHO05D007029 2.0e-209 733.0 698 56.3
Oeu061927.1 Olea europaea HOM05D005824 ORTHO05D007029 4.4e-209 731.9 711 57.0
TAR362G0448 Trochodendron aralioides HOM05D005824 ORTHO05D007029 9.9e-209 730.7 664 60.4
Manes.06G027100 Manihot esculenta HOM05D005824 ORTHO05D007029 1.7e-208 729.9 663 60.2
Lj3g0001001 Lotus japonicus HOM05D005824 ORTHO05D007029 2.9e-208 729.2 707 56.7
Glyma.02G192500 Glycine max HOM05D005824 ORTHO05D007029 1.1e-207 727.2 719 56.1
Thecc.09G352900 Theobroma cacao HOM05D005824 ORTHO05D007029 1.4e-207 726.9 694 58.5
Lj5g0026124 Lotus japonicus HOM05D005824 ORTHO05D007029 2.7e-206 722.6 708 56.5
Gohir.A03G155800 Gossypium hirsutum HOM05D005824 ORTHO05D007029 1.3e-205 720.3 697 57.2
PGSC0003DMG400018251 Solanum tuberosum HOM05D005824 ORTHO05D007029 1.3e-205 720.3 673 58.5
Lj5A322T66 Lonicera japonica HOM05D005824 ORTHO05D007029 6.6e-205 718.0 636 60.4
Medtr1g055080 Medicago truncatula HOM05D005824 ORTHO05D007029 1.1e-204 717.2 705 54.9
vmacro01596 Vaccinium macrocarpon HOM05D005824 ORTHO05D007029 1.9e-204 716.5 649 58.9
Ca_11665_v3 Cicer arietinum L. HOM05D005824 ORTHO05D007029 1.3e-203 713.8 668 57.5
Psat6g118640 Pisum sativum HOM05D005824 ORTHO05D007029 2.1e-203 713.0 730 54.1
Glyma.10G084300 Glycine max HOM05D005824 ORTHO05D007029 6.2e-203 711.4 719 55.1
CAN.G1374.10 Capsicum annuum HOM05D005824 ORTHO05D007029 1.1e-202 710.7 670 58.4
Gorai.005G200700 Gossypium raimondii HOM05D005824 ORTHO05D007029 1.8e-202 709.9 706 56.4
arahy.Tifrunner.gnm1.ann1.E5V6X9 Arachis hypogaea HOM05D005824 ORTHO05D007029 5.3e-202 708.4 711 54.6
MSTRG.15631 Avicennia marina HOM05D005824 ORTHO05D007029 6.9e-202 708.0 669 58.1
CANSAT54G1845 Cannabis sativa HOM05D005824 ORTHO05D007029 9.0e-202 707.6 713 54.8
TPR.G21237 Trifolium pratense HOM05D005824 ORTHO05D007029 1.2e-201 707.2 730 54.0
Cpa.g.sc48.209 Carica papaya HOM05D005824 ORTHO05D007029 2.0e-201 706.4 668 56.1
TPR.G12910 Trifolium pratense HOM05D005824 ORTHO05D007029 2.6e-201 706.1 716 53.8
Prupe.6G306900 Prunus persica HOM05D005824 ORTHO05D007029 3.4e-201 705.7 717 54.7
arahy.Tifrunner.gnm1.ann1.S86EGP Arachis hypogaea HOM05D005824 ORTHO05D007029 1.7e-200 703.4 711 54.4
Eucgr.B01798 Eucalyptus grandis HOM05D005824 ORTHO05D007029 1.6e-198 696.8 677 56.9
Atru.chr12.1601 Acer truncatum HOM05D005824 ORTHO05D007029 2.1e-195 686.4 697 56.1
SalBow7G3942 Salvia bowleyana HOM05D005824 ORTHO05D007029 9.0e-194 681.0 668 54.6
Phvul.007G265900 Phaseolus vulgaris HOM05D005824 ORTHO05D007029 3.4e-193 679.1 710 53.0
Aqoxy2G02580 Aquilegia oxysepala HOM05D005824 ORTHO05D007029 4.9e-192 675.2 668 55.4
TWI38G0226 Tripterygium wilfordii HOM05D005824 ORTHO05D007029 1.9e-191 673.3 665 55.3
Migut.B00860 Erythranthe guttata HOM05D005824 ORTHO05D007029 6.0e-190 668.3 657 55.4
Gohir.D02G178900 Gossypium hirsutum HOM05D005824 ORTHO05D007029 1.3e-189 667.2 706 53.8
Nn2g14227 Nelumbo nucifera HOM05D005824 ORTHO05D007029 3.9e-189 665.6 668 55.7
Cc02_g35570 Coffea canephora HOM05D005824 ORTHO05D007029 1.5e-188 663.7 763 49.9
Nitab4.5_0000185g0360 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.9e-188 663.3 671 54.8
PSO339G3868 Papaver somniferum HOM05D005824 ORTHO05D007029 5.6e-188 661.8 666 56.2
ClCG07G011770 Citrullus lanatus HOM05D005824 ORTHO05D007029 1.3e-187 660.6 668 54.6
Sc09g0002470 Simmondsia chinensis HOM05D005824 ORTHO05D007029 4.8e-187 658.7 714 52.5
AUR62006798 Chenopodium quinoa HOM05D005824 ORTHO05D007029 1.4e-186 657.1 754 50.7
Hund21844 Selenicereus undatus HOM05D005824 ORTHO05D007029 3.1e-186 656.0 807 48.5
PSO384G0570 Papaver somniferum HOM05D005824 ORTHO05D007029 2.0e-185 653.3 666 54.8
CsaV3_4G002430 Cucumis sativus L. HOM05D005824 ORTHO05D007029 8.4e-184 647.9 669 54.6
MBI19_g32704_MAGBIO Magnolia biondii HOM05D005824 ORTHO05D007029 3.2e-183 646.0 725 51.3
MD04G1189300 Malus domestica HOM05D005824 ORTHO05D007029 3.2e-183 646.0 712 50.3
AUR62000450 Chenopodium quinoa HOM05D005824 ORTHO05D007029 5.5e-183 645.2 762 49.3
MELO3C017799.2 Cucumis melo HOM05D005824 ORTHO05D007029 9.3e-183 644.4 669 54.4
SGA_v2.0_scaffold33G13450 Striga asiatica HOM05D005824 ORTHO05D007029 8.7e-181 637.9 689 50.8
MD12G1202100 Malus domestica HOM05D005824 ORTHO05D007029 1.1e-180 637.5 713 49.9
PSO017G5895 Papaver somniferum HOM05D005824 ORTHO05D007029 5.3e-178 628.6 665 53.2
COL.COLO4_11087 Corchorus olitorius HOM05D005824 ORTHO05D007029 9.0e-178 627.9 665 52.3
Hma1.2p1_1243F.1_g269980 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 3.4e-177 625.9 573 58.5
EL10Ac4g09532 Beta vulgaris HOM05D005824 ORTHO05D007029 4.5e-177 625.5 729 50.1
THA.LOC104821746 Tarenaya hassleriana HOM05D005824 ORTHO05D007029 1.7e-176 623.6 730 49.5
ECA247G2466 Erigeron canadensis HOM05D005824 ORTHO05D007029 4.2e-175 619.0 660 52.0
Sed0007659 Sechium edule HOM05D005824 ORTHO05D007029 4.2e-175 619.0 672 51.8
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 1.6e-174 617.1 660 54.4
RcHm_v2.0_Chr3g0458051 Rosa chinensis HOM05D005824 ORTHO05D007029 3.0e-173 612.8 723 49.0
PSO063G2449 Papaver somniferum HOM05D005824 ORTHO05D007029 4.3e-172 609.0 667 52.6
Duzib168G0004 Durio zibethinus HOM05D005824 ORTHO05D007029 2.2e-168 596.7 663 51.0
FAN14G3202 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.0e-165 587.8 720 48.1
FvH4_6g08180 Fragaria vesca HOM05D005824 ORTHO05D007029 3.9e-165 585.9 720 48.1
Sp2g21220 Schrenkiella parvula HOM05D005824 ORTHO05D007029 2.5e-159 566.6 741 45.3
Thhalv10003721m.g Eutrema salsugineum HOM05D005824 ORTHO05D007029 9.4e-159 564.7 738 44.9
Peaxi162Scf00357g00429 Petunia axillaris HOM05D005824 ORTHO05D007029 1.0e-157 561.2 623 52.3
Carub.0006s2449 Capsella rubella HOM05D005824 ORTHO05D007029 2.0e-156 557.0 730 45.3
FAN09G3961 Fragaria x ananassa HOM05D005824 ORTHO05D007029 2.0e-156 557.0 720 46.5
Ah.10g027060 Amaranthus hybridus HOM05D005824 ORTHO05D007029 3.2e-151 539.7 762 44.5
Aa31LG11G9880 Aethionema arabicum HOM05D005824 ORTHO05D007029 2.7e-150 536.6 714 45.1
CARHR186810 Cardamine hirsuta HOM05D005824 ORTHO05D007029 2.7e-150 536.6 732 43.6
DCAR_005271 Daucus carota HOM05D005824 ORTHO05D007029 6.1e-150 535.4 679 47.6
AT5G26760 Arabidopsis thaliana HOM05D005824 ORTHO05D007029 5.2e-149 532.3 762 43.7
unitig_748.g6998 Utricularia gibba HOM05D005824 ORTHO05D000260 2.8e-147 526.6 648 47.1
FAN05G5613 Fragaria x ananassa HOM05D005824 ORTHO05D007029 6.3e-147 525.4 698 46.8
Nitab4.5_0002783g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 2.4e-146 523.5 664 46.2
AL6G38630 Arabidopsis lyrata HOM05D005824 ORTHO05D007029 1.3e-144 517.7 856 39.8
ATR0693G066 Amborella trichopoda HOM05D005824 ORTHO05D007029 2.8e-139 500.0 656 45.9
Lsat_1_v5_gn_9_78801 Lactuca sativa HOM05D005824 ORTHO05D007029 2.8e-139 500.0 633 49.0
CDE01G0540 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 2.7e-137 493.4 687 43.5
Ciclev10011677m.g Citrus clementina HOM05D005824 ORTHO05D007029 8.6e-136 488.4 477 56.4
FAN02G4519 Fragaria x ananassa HOM05D005824 ORTHO05D007029 4.9e-131 472.6 699 42.6
HanXRQChr12g0362901 Helianthus annuus HOM05D005824 ORTHO05D007029 2.7e-129 466.8 657 44.9
PGR083G1123 Punica granatum HOM05D005824 ORTHO05D007029 6.6e-128 462.2 508 52.6
C02p58640 Brassica napus HOM05D005824 ORTHO05D007029 8.6e-128 461.8 818 38.4
BolC2t11924H Brassica oleracea HOM05D005824 ORTHO05D007029 6.1e-126 455.7 824 37.4
BraA02t08872Z Brassica rapa HOM05D005824 ORTHO05D007029 4.0e-125 453.0 855 36.8
A02p39030 Brassica napus HOM05D005824 ORTHO05D007029 1.2e-124 451.4 854 36.7
Actinidia35501 Actinidia chinensis HOM05D005824 ORTHO05D007029 1.2e-113 414.8 651 41.8
BcaNung06222 Brassica carinata HOM05D005824 ORTHO05D007029 2.7e-113 413.7 821 36.5
Os05g0134300 Oryza sativa ssp. japonica HOM05D005824 ORTHO05D007029 1.5e-108 397.9 734 39.2
BolC7t44682H Brassica oleracea HOM05D005824 ORTHO05D007029 1.1e-98 365.2 675 38.1
C07p41490 Brassica napus HOM05D005824 ORTHO05D007029 5.4e-98 362.8 675 37.9
BcaNung03676 Brassica carinata HOM05D005824 ORTHO05D007029 9.6e-95 352.1 674 37.4
Gohir.A08G201701 Gossypium hirsutum HOM05D005824 ORTHO05D007029 3.1e-93 347.1 665 38.0
Solyc01g101010.4 Solanum lycopersicum HOM05D005824 ORTHO05D007029 3.3e-87 327.0 345 53.3
Hma1.2p1_1553F.1_g290340 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 1.2e-84 318.5 636 38.4
Zm00001eb354720 Zea mays HOM05D005824 ORTHO05D007029 6.9e-77 292.7 605 35.0
Mapoly0075s0015 Marchantia polymorpha HOM05D005824 ORTHO05D007029 1.5e-76 291.6 727 31.1
HPP92_021934 Vanilla planifolia HOM05D005824 ORTHO05D007029 7.9e-73 279.3 358 46.4
Nitab4.5_0000185g0370 Nicotiana tabacum HOM05D005824 ORTHO05D007029 8.4e-67 259.2 277 50.5
Pp3c6_10400 Physcomitrium patens HOM05D005824 ORTHO05D007029 2.3e-64 251.1 903 27.4
SGA_v2.0_scaffold438G51629 Striga asiatica HOM05D005824 ORTHO05D007029 6.5e-59 233.0 201 59.7
SMO203G0090 Selaginella moellendorffii HOM05D005824 ORTHO05D007029 1.9e-58 231.5 667 28.3
SEGI_20129 Sequoiadendron giganteum HOM05D005824 ORTHO05D007029 8.8e-56 222.6 408 38.2
AagrBONN_evm.TU.Sc2ySwM_117.2728 Anthoceros agrestis HOM05D005824 ORTHO05D007029 2.2e-51 208.0 662 27.5
A06p36990 Brassica napus HOM05D005824 ORTHO05D007029 5.3e-45 186.8 176 51.1
BraA06t26625Z Brassica rapa HOM05D005824 ORTHO05D007029 5.3e-45 186.8 176 51.1
Oeu060660.1 Olea europaea HOM05D005824 ORTHO05D007029 1.0e-40 172.6 126 68.3
CBR_g20185 Chara braunii HOM05D005824 ORTHO05D007029 1.1e-39 169.1 330 31.8
Dinv30929 Davidia involucrata HOM05D005824 ORTHO05D007029 5.3e-37 160.2 135 65.9
HPP92_021933 Vanilla planifolia HOM05D005824 ORTHO05D007029 5.9e-36 156.8 209 42.6
CANSAT54G0922 Cannabis sativa HOM05D005824 ORTHO05D007029 2.2e-35 154.8 237 41.8
Cfa020079 Carpinus fangiana HOM05D005824 ORTHO05D007029 1.0e-27 129.4 82 74.4
Nitab4.5_0000185g0350 Nicotiana tabacum HOM05D005824 ORTHO05D007029 5.7e-23 113.6 103 55.3
CDE12G0845 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 4.8e-22 110.5 96 58.3
AUR62009842 Chenopodium quinoa HOM05D003327 ORTHO05D004535 8.6e-19 99.8 174 39.7
Zm00001eb056090 Zea mays HOM05D000739 ORTHO05D007029 4.0e-16 90.9 126 40.5
Zm00001eb289330 Zea mays HOM05D005824 ORTHO05D007029 2.8e-14 84.7 96 43.8
QL03p009284 Quercus lobata HOM05D005824 ORTHO05D007029 1.5e-10 72.4 54 66.7
VMungo0251G1262 Vigna mungo HOM05D005824 ORTHO05D007029 1.5e-10 72.4 217 32.7


User provided reference genes

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