Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01018671001 Vitis vinifera HOM05D004330 ORTHO05D005182 6.2e-45 183.7 91 100.0
TWI12G0377 Tripterygium wilfordii HOM05D004330 ORTHO05D005182 9.7e-14 80.1 64 64.1
Actinidia29358 Actinidia chinensis HOM05D004330 ORTHO05D005182 4.8e-13 77.8 46 80.4
Cc10_g16170 Coffea canephora HOM05D004330 ORTHO05D005182 8.2e-13 77.0 46 78.3
Actinidia16901 Actinidia chinensis HOM05D004330 ORTHO05D005182 1.1e-12 76.6 46 78.3
Cpa.g.sc249.10 Carica papaya HOM05D004330 ORTHO05D005182 1.1e-12 76.6 70 60.0
Cfa008036 Carpinus fangiana HOM05D004330 ORTHO05D005182 1.1e-12 76.6 64 64.1
Dinv22060 Davidia involucrata HOM05D004330 ORTHO05D005182 1.1e-12 76.6 46 80.4
Hma1.2p1_0016F.1_g011010 Hydrangea macrophylla HOM05D004330 ORTHO05D005182 1.1e-12 76.6 46 80.4
Ciclev10019077m.g Citrus clementina HOM05D004330 ORTHO05D005182 1.4e-12 76.3 60 68.3
FAN19G3045 Fragaria x ananassa HOM05D004330 ORTHO05D005182 1.4e-12 76.3 46 78.3
MD08G1244900 Malus domestica HOM05D004330 ORTHO05D005182 1.4e-12 76.3 46 78.3
Prupe.1G566400 Prunus persica HOM05D004330 ORTHO05D005182 1.4e-12 76.3 46 78.3
RcHm_v2.0_Chr6g0249411 Rosa chinensis HOM05D004330 ORTHO05D005182 1.4e-12 76.3 46 78.3
Eucgr.C04264 Eucalyptus grandis HOM05D004330 ORTHO05D005182 1.8e-12 75.9 60 68.3
FvH4_2g00140 Fragaria vesca HOM05D004330 ORTHO05D005182 1.8e-12 75.9 46 78.3
FAN24G1765 Fragaria x ananassa HOM05D004330 ORTHO05D005182 1.8e-12 75.9 46 78.3
CANSAT01G1169 Cannabis sativa HOM05D004330 ORTHO05D005182 3.1e-12 75.1 46 76.1
COL.COLO4_00397 Corchorus olitorius HOM05D004330 ORTHO05D005182 3.1e-12 75.1 60 66.7
CiPaw.03G012300 Carya illinoinensis HOM05D004330 ORTHO05D005182 4.1e-12 74.7 64 62.5
MD15G1440000 Malus domestica HOM05D004330 ORTHO05D005182 4.1e-12 74.7 46 76.1
Manes.15G103100 Manihot esculenta HOM05D004330 ORTHO05D005182 4.1e-12 74.7 60 66.7
GSVIVG01012102001 Vitis vinifera HOM05D004330 ORTHO05D005182 4.1e-12 74.7 64 67.2
AT1G71300 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 5.3e-12 74.3 68 55.9
COL.COLO4_37491 Corchorus olitorius HOM05D004330 ORTHO05D005182 5.3e-12 74.3 64 64.1
Peaxi162Scf00078g01141 Petunia axillaris HOM05D004330 ORTHO05D005182 5.3e-12 74.3 63 63.5
Oeu020638.1 Olea europaea HOM05D004330 ORTHO05D005182 9.1e-12 73.6 46 73.9
arahy.Tifrunner.gnm1.ann1.7LJM3H Arachis hypogaea HOM05D004330 ORTHO05D005182 1.2e-11 73.2 46 73.9
arahy.Tifrunner.gnm1.ann1.A4ASB6 Arachis hypogaea HOM05D004330 ORTHO05D005182 1.2e-11 73.2 46 73.9
arahy.Tifrunner.gnm1.ann1.KU2W2N Arachis hypogaea HOM05D004330 ORTHO05D005182 1.2e-11 73.2 46 73.9
Rhsim01G0101300 Rhododendron simsii HOM05D004330 ORTHO05D005182 1.2e-11 73.2 45 77.8
AL2G30885 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 1.5e-11 72.8 60 63.3
BcaB03g14885 Brassica carinata HOM05D004330 ORTHO05D005182 1.5e-11 72.8 60 63.3
BcaC08g46563 Brassica carinata HOM05D004330 ORTHO05D005182 1.5e-11 72.8 60 63.3
A07p37610 Brassica napus HOM05D004330 ORTHO05D005182 1.5e-11 72.8 60 63.3
C06p45370 Brassica napus HOM05D004330 ORTHO05D005182 1.5e-11 72.8 60 63.3
BolC6t39595H Brassica oleracea HOM05D004330 ORTHO05D005182 1.5e-11 72.8 60 63.3
BraA07t31323Z Brassica rapa HOM05D004330 ORTHO05D005182 1.5e-11 72.8 60 63.3
CSS0008451 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 1.5e-11 72.8 46 73.9
Glyma.19G249400 Glycine max HOM05D004330 ORTHO05D005182 1.5e-11 72.8 46 73.9
Phvul.006G106700 Phaseolus vulgaris HOM05D004330 ORTHO05D005182 1.5e-11 72.8 46 73.9
Sp5g26470 Schrenkiella parvula HOM05D004330 ORTHO05D005182 1.5e-11 72.8 60 63.3
Thecc.08G188100 Theobroma cacao HOM05D004330 ORTHO05D005182 1.5e-11 72.8 64 62.5
Lj7C415G17 Lonicera japonica HOM05D004330 ORTHO05D005182 2.0e-11 72.4 46 73.9
CiPaw.04G008600 Carya illinoinensis HOM05D004330 ORTHO05D005182 2.6e-11 72.0 64 62.5
Nitab4.5_0007150g0080 Nicotiana tabacum HOM05D004330 ORTHO05D005182 2.6e-11 72.0 45 75.6
SalBow6G1408 Salvia bowleyana HOM05D004330 ORTHO05D005182 2.6e-11 72.0 46 73.9
SGA_v2.0_scaffold227G43197 Striga asiatica HOM05D004330 ORTHO05D005182 2.6e-11 72.0 46 73.9
Ah.11g049400 Amaranthus hybridus HOM05D004330 ORTHO05D005182 3.4e-11 71.6 46 73.9
AT1G71270 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 3.4e-11 71.6 60 61.7
Carub.0002s1817 Capsella rubella HOM05D004330 ORTHO05D005182 3.4e-11 71.6 59 64.4
Migut.C00321 Erythranthe guttata HOM05D004330 ORTHO05D005182 3.4e-11 71.6 46 73.9
Migut.G00904 Erythranthe guttata HOM05D004330 ORTHO05D005182 3.4e-11 71.6 46 73.9
Thhalv10018205m.g Eutrema salsugineum HOM05D004330 ORTHO05D005182 3.4e-11 71.6 60 61.7
Gohir.A05G251400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 3.4e-11 71.6 63 65.1
Gohir.D05G252400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 3.4e-11 71.6 63 65.1
Gorai.009G264800 Gossypium raimondii HOM05D004330 ORTHO05D005182 3.4e-11 71.6 63 65.1
Nitab4.5_0000079g0120 Nicotiana tabacum HOM05D004330 ORTHO05D005182 3.4e-11 71.6 45 75.6
Nitab4.5_0002887g0010 Nicotiana tabacum HOM05D004330 ORTHO05D005182 3.4e-11 71.6 49 69.4
Nitab4.5_0007117g0020 Nicotiana tabacum HOM05D004330 ORTHO05D005182 3.4e-11 71.6 45 75.6
Sabra06G0020300 Salix brachista HOM05D004330 ORTHO05D005182 3.4e-11 71.6 60 65.0
Carub.0002s1815 Capsella rubella HOM05D004330 ORTHO05D005182 4.5e-11 71.2 60 61.7
Lsat_1_v5_gn_6_109860 Lactuca sativa HOM05D004330 ORTHO05D005182 4.5e-11 71.2 46 71.7
PSO210G1668 Papaver somniferum HOM05D004330 ORTHO05D005182 4.5e-11 71.2 46 73.9
Potri.006G027100 Populus trichocarpa HOM05D004330 ORTHO05D005182 4.5e-11 71.2 60 65.0
CSS0031487 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 5.9e-11 70.9 64 64.1
AUR62011839 Chenopodium quinoa HOM05D004330 ORTHO05D005182 5.9e-11 70.9 72 56.9
AUR62024682 Chenopodium quinoa HOM05D004330 ORTHO05D005182 5.9e-11 70.9 72 56.9
Glyma.03G252000 Glycine max HOM05D004330 ORTHO05D005182 5.9e-11 70.9 46 71.7
Lj5g0027584 Lotus japonicus HOM05D004330 ORTHO05D005182 5.9e-11 70.9 46 71.7
Sc17g0000550 Simmondsia chinensis HOM05D004330 ORTHO05D005182 5.9e-11 70.9 46 73.9
CSS0001083 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 1.0e-10 70.1 64 64.1
Nn6g32085 Nelumbo nucifera HOM05D004330 ORTHO05D005182 1.0e-10 70.1 62 66.1
SalBow6G7193 Salvia bowleyana HOM05D004330 ORTHO05D005182 1.0e-10 70.1 46 71.7
VMungo0540G0979 Vigna mungo HOM05D004330 ORTHO05D005182 1.0e-10 70.1 46 71.7
AL2G30900 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 1.3e-10 69.7 60 61.7
CDE03G0141 Ceratophyllum demersum HOM05D004330 ORTHO05D005182 1.3e-10 69.7 50 68.0
TAR628G0944 Trochodendron aralioides HOM05D004330 ORTHO05D005182 1.3e-10 69.7 46 73.9
CAN.G473.93 Capsicum annuum HOM05D004330 ORTHO05D005182 1.7e-10 69.3 62 66.1
THA.LOC104823378 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 1.7e-10 69.3 60 61.7
PSO761G0081 Papaver somniferum HOM05D004330 ORTHO05D005182 2.2e-10 68.9 46 71.7
PGR031G1280 Punica granatum HOM05D004330 ORTHO05D005182 2.2e-10 68.9 54 63.0
Solyc02g094090.4 Solanum lycopersicum HOM05D004330 ORTHO05D005182 2.2e-10 68.9 62 64.5
Sopen02g038710 Solanum pennellii HOM05D004330 ORTHO05D005182 2.2e-10 68.9 62 64.5
MSTRG.22475 Avicennia marina HOM05D004330 ORTHO05D005182 3.8e-10 68.2 46 69.6
Lalb_Chr04g0261991 Lupinus albus HOM05D004330 ORTHO05D005182 3.8e-10 68.2 46 69.6
THA.LOC104803377 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 3.8e-10 68.2 60 60.0
EL10As5g23498 Beta vulgaris HOM05D004330 ORTHO05D005182 5.0e-10 67.8 72 55.6
unitig_37.g12692 Utricularia gibba HOM05D004330 ORTHO05D005182 5.0e-10 67.8 63 61.9
vmacro06107 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 5.0e-10 67.8 45 73.3
vmacro23409 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 5.0e-10 67.8 45 73.3
Medtr1g079770 Medicago truncatula HOM05D004330 ORTHO05D005182 6.5e-10 67.4 46 67.4
Psat6g142240 Pisum sativum HOM05D004330 ORTHO05D005182 6.5e-10 67.4 46 67.4
TPR.G10262 Trifolium pratense HOM05D004330 ORTHO05D005182 6.5e-10 67.4 46 67.4
ATR0580G447 Amborella trichopoda HOM05D004330 ORTHO05D005182 8.5e-10 67.0 50 66.0
Haze_02242 Corylus avellana HOM05D004330 ORTHO05D005182 8.5e-10 67.0 59 61.0
DCAR_024855 Daucus carota HOM05D004330 ORTHO05D005182 8.5e-10 67.0 62 59.7
MBI13_g40627_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 8.5e-10 67.0 50 64.0
MBI16_g41537_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 1.1e-09 66.6 46 67.4
Sed0024292 Sechium edule HOM05D004330 ORTHO05D005182 1.1e-09 66.6 50 64.0
CsaV3_2G033380 Cucumis sativus L. HOM05D004330 ORTHO05D005182 1.4e-09 66.2 50 64.0
ECA246G0284 Erigeron canadensis HOM05D004330 ORTHO05D005182 1.4e-09 66.2 46 67.4
HanXRQChr05g0150611 Helianthus annuus HOM05D004330 ORTHO05D005182 1.4e-09 66.2 46 67.4
MELO3C008109.2 Cucumis melo HOM05D004330 ORTHO05D005182 2.5e-09 65.5 50 64.0
QL09p001201 Quercus lobata HOM05D004330 ORTHO05D005182 2.5e-09 65.5 64 62.5
Hund19537 Selenicereus undatus HOM05D004330 ORTHO05D005182 2.5e-09 65.5 72 52.8
Os03g0417900 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 5.5e-09 64.3 63 58.7
HPP92_006237 Vanilla planifolia HOM05D004330 ORTHO05D005182 7.2e-09 63.9 63 60.3
HPP92_006305 Vanilla planifolia HOM05D004330 ORTHO05D005182 7.2e-09 63.9 63 60.3
Ca_09987_v3 Cicer arietinum L. HOM05D004330 ORTHO05D005182 9.4e-09 63.5 46 63.0
Aqoxy5G00868 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 1.2e-08 63.2 46 65.2
Aqoxy2G00735 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 2.3e-07 58.9 48 58.3
Haze_02247 Corylus avellana HOM05D004330 ORTHO05D005182 3.0e-07 58.5 55 56.4
AagrBONN_evm.TU.Sc2ySwM_228.5612 Anthoceros agrestis HOM05D004330 ORTHO05D005182 5.1e-07 57.8 50 58.0
AagrBONN_evm.TU.Sc2ySwM_228.5613 Anthoceros agrestis HOM05D004330 ORTHO05D005182 5.1e-07 57.8 50 58.0
ClCG11G008260 Citrullus lanatus HOM05D004330 ORTHO05D005182 1.1e-06 56.6 48 60.4
Zm00001eb393130 Zea mays HOM05D004330 ORTHO05D005182 1.1e-06 56.6 63 55.6
Aa31LG4G9240 Aethionema arabicum HOM05D004330 ORTHO05D005182 2.6e-06 55.5 51 54.9
Os10g0488300 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 4.4e-06 54.7 53 49.1
Pp3c4_27380 Physcomitrium patens HOM05D004330 ORTHO05D005182 4.4e-06 54.7 50 56.0
SMO304G0018 Selaginella moellendorffii HOM05D004330 ORTHO05D005182 4.4e-06 54.7 49 55.1


User provided reference genes

Program Settings