Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014044001 Vitis vinifera HOM05D004178 ORTHO05D005204 7.0e-50 200.3 99 100.0
Rhsim03G0166000 Rhododendron simsii HOM05D004178 ORTHO05D005204 1.4e-29 132.9 73 91.8
CiPaw.03G020700 Carya illinoinensis HOM05D004178 ORTHO05D005204 2.3e-29 132.1 73 89.0
GSVIVG01013865001 Vitis vinifera HOM05D004178 ORTHO05D005204 2.3e-29 132.1 73 91.8
Actinidia13583 Actinidia chinensis HOM05D004178 ORTHO05D005204 3.0e-29 131.7 73 90.4
Cfa008151 Carpinus fangiana HOM05D004178 ORTHO05D005204 4.0e-29 131.3 73 90.4
MELO3C017663.2 Cucumis melo HOM05D004178 ORTHO05D005204 4.0e-29 131.3 73 90.4
Thecc.03G153700 Theobroma cacao HOM05D004178 ORTHO05D005204 4.0e-29 131.3 73 90.4
Manes.06G133600 Manihot esculenta HOM05D004178 ORTHO05D005204 5.2e-29 131.0 73 90.4
Hund11836 Selenicereus undatus HOM05D004178 ORTHO05D005204 6.8e-29 130.6 73 89.0
CAN.G515.10 Capsicum annuum HOM05D004178 ORTHO05D005204 8.9e-29 130.2 73 90.4
DCAR_014619 Daucus carota HOM05D004178 ORTHO05D005204 8.9e-29 130.2 73 90.4
Dinv06570 Davidia involucrata HOM05D004178 ORTHO05D005204 8.9e-29 130.2 73 90.4
Nitab4.5_0000818g0230 Nicotiana tabacum HOM05D004178 ORTHO05D005204 8.9e-29 130.2 73 90.4
Nitab4.5_0003647g0020 Nicotiana tabacum HOM05D004178 ORTHO05D005204 8.9e-29 130.2 73 90.4
Peaxi162Scf00167g00610 Petunia axillaris HOM05D004178 ORTHO05D005204 8.9e-29 130.2 73 90.4
Solyc05g051680.4 Solanum lycopersicum HOM05D004178 ORTHO05D005204 8.9e-29 130.2 73 90.4
Sopen05g030150 Solanum pennellii HOM05D004178 ORTHO05D005204 8.9e-29 130.2 73 90.4
TWI14G1279 Tripterygium wilfordii HOM05D004178 ORTHO05D005204 8.9e-29 130.2 73 90.4
ClCG07G016820 Citrullus lanatus HOM05D004178 ORTHO05D005204 1.2e-28 129.8 73 89.0
CsaV3_4G004020 Cucumis sativus L. HOM05D004178 ORTHO05D005204 1.2e-28 129.8 73 89.0
Ciclev10004204m.g Citrus clementina HOM05D004178 ORTHO05D005204 1.5e-28 129.4 73 86.3
Migut.F00486 Erythranthe guttata HOM05D004178 ORTHO05D005204 1.5e-28 129.4 73 90.4
Eucgr.A02900 Eucalyptus grandis HOM05D004178 ORTHO05D005204 2.0e-28 129.0 73 89.0
Nn6g33950 Nelumbo nucifera HOM05D004178 ORTHO05D005204 2.0e-28 129.0 73 89.0
CSS0036077 Camellia sinensis var. sinensis HOM05D004178 ORTHO05D005204 2.6e-28 128.6 73 87.7
Cc02_g04400 Coffea canephora HOM05D004178 ORTHO05D005204 2.6e-28 128.6 73 87.7
ECA232G0935 Erigeron canadensis HOM05D004178 ORTHO05D005204 3.4e-28 128.3 73 89.0
Oeu021707.2 Olea europaea HOM05D004178 ORTHO05D005204 3.4e-28 128.3 73 89.0
SalBow5G4122 Salvia bowleyana HOM05D004178 ORTHO05D005204 3.4e-28 128.3 73 89.0
Sed0013674 Sechium edule HOM05D004178 ORTHO05D005204 4.4e-28 127.9 73 87.7
SGA_v2.0_scaffold2G01219 Striga asiatica HOM05D004178 ORTHO05D005204 7.5e-28 127.1 73 87.7
Atru.chr1.753 Acer truncatum HOM05D004178 ORTHO05D005204 9.8e-28 126.7 73 87.7
AUR62015432 Chenopodium quinoa HOM05D004178 ORTHO05D005204 9.8e-28 126.7 73 86.3
HanXRQChr01g0028141 Helianthus annuus HOM05D004178 ORTHO05D005204 9.8e-28 126.7 73 87.7
Lj1C978G4 Lonicera japonica HOM05D004178 ORTHO05D005204 9.8e-28 126.7 73 87.7
Aqoxy5G03870 Aquilegia oxysepala HOM05D004178 ORTHO05D005204 1.7e-27 125.9 73 87.7
BcaC06g33151 Brassica carinata HOM05D004178 ORTHO05D005204 1.7e-27 125.9 73 86.3
Thhalv10003566m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 1.7e-27 125.9 73 86.3
FvH4_7g27291 Fragaria vesca HOM05D004178 ORTHO05D005204 1.7e-27 125.9 73 84.9
FAN03G2333 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.7e-27 125.9 73 84.9
FAN03G3201 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.7e-27 125.9 73 84.9
FAN06G0596 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.7e-27 125.9 73 84.9
FAN06G2180 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.7e-27 125.9 73 84.9
Sabra03G0074500 Salix brachista HOM05D004178 ORTHO05D005204 1.7e-27 125.9 103 68.0
Ah.07g207660 Amaranthus hybridus HOM05D004178 ORTHO05D005204 2.2e-27 125.6 73 84.9
Gohir.A12G197800 Gossypium hirsutum HOM05D004178 ORTHO05D005204 2.2e-27 125.6 73 86.3
Gorai.008G215500 Gossypium raimondii HOM05D004178 ORTHO05D005204 2.2e-27 125.6 73 86.3
Sp2g24660 Schrenkiella parvula HOM05D004178 ORTHO05D005204 3.7e-27 124.8 73 84.9
Aa31LG11G1940 Aethionema arabicum HOM05D004178 ORTHO05D005204 4.9e-27 124.4 73 84.9
AL8G38150 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 4.9e-27 124.4 73 84.9
EL10Ac3g05856 Beta vulgaris HOM05D004178 ORTHO05D005204 4.9e-27 124.4 70 88.6
Carub.0008s2215 Capsella rubella HOM05D004178 ORTHO05D005204 4.9e-27 124.4 73 84.9
FAN01G0652 Fragaria x ananassa HOM05D004178 ORTHO05D005204 4.9e-27 124.4 73 83.6
FAN10G1085 Fragaria x ananassa HOM05D004178 ORTHO05D005204 4.9e-27 124.4 73 83.6
MD07G1252300 Malus domestica HOM05D004178 ORTHO05D005204 4.9e-27 124.4 73 84.9
RcHm_v2.0_Chr1g0374131 Rosa chinensis HOM05D004178 ORTHO05D005204 4.9e-27 124.4 73 83.6
CDE11G0310 Ceratophyllum demersum HOM05D004178 ORTHO05D005204 6.4e-27 124.0 73 83.6
Gohir.D12G200300 Gossypium hirsutum HOM05D004178 ORTHO05D005204 6.4e-27 124.0 71 87.3
CARHR275220 Cardamine hirsuta HOM05D004178 ORTHO05D005204 8.3e-27 123.6 73 83.6
Sc19g0002080 Simmondsia chinensis HOM05D004178 ORTHO05D005204 8.3e-27 123.6 70 88.6
AT5G61460 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 1.1e-26 123.2 73 83.6
MSTRG.8830 Avicennia marina HOM05D004178 ORTHO05D005204 1.4e-26 122.9 73 84.9
BcaC06g33236 Brassica carinata HOM05D004178 ORTHO05D005204 1.4e-26 122.9 73 83.6
C07p45140 Brassica napus HOM05D004178 ORTHO05D005204 1.4e-26 122.9 73 83.6
BolC7t45036H Brassica oleracea HOM05D004178 ORTHO05D005204 1.4e-26 122.9 73 83.6
Psat7g194520 Pisum sativum HOM05D004178 ORTHO05D005204 1.4e-26 122.9 72 86.1
A03p47060 Brassica napus HOM05D004178 ORTHO05D005204 3.2e-26 121.7 73 82.2
BraA03t13829Z Brassica rapa HOM05D004178 ORTHO05D005204 3.2e-26 121.7 73 82.2
Phvul.011G007300 Phaseolus vulgaris HOM05D004178 ORTHO05D005204 3.2e-26 121.7 73 83.6
VMungo1127G0288 Vigna mungo HOM05D004178 ORTHO05D005204 3.2e-26 121.7 73 83.6
Lalb_Chr19g0140351 Lupinus albus HOM05D004178 ORTHO05D005204 4.1e-26 121.3 72 84.7
Medtr4g036760 Medicago truncatula HOM05D004178 ORTHO05D005204 4.1e-26 121.3 72 86.1
Lsat_1_v5_gn_9_51940 Lactuca sativa HOM05D004178 ORTHO05D005204 5.4e-26 120.9 68 89.7
TPR.G3678 Trifolium pratense HOM05D004178 ORTHO05D005204 5.4e-26 120.9 72 84.7
Zm00001eb309160 Zea mays HOM05D004178 ORTHO05D005204 5.4e-26 120.9 73 82.2
arahy.Tifrunner.gnm1.ann1.2YP1UN Arachis hypogaea HOM05D004178 ORTHO05D005204 9.2e-26 120.2 72 83.3
arahy.Tifrunner.gnm1.ann1.D3FWW6 Arachis hypogaea HOM05D004178 ORTHO05D005204 9.2e-26 120.2 72 83.3
Carub.0006s0663 Capsella rubella HOM05D004178 ORTHO05D005204 9.2e-26 120.2 70 85.7
Lj3g0020737 Lotus japonicus HOM05D004178 ORTHO05D005204 9.2e-26 120.2 73 83.6
TPR.G2991 Trifolium pratense HOM05D004178 ORTHO05D005204 9.2e-26 120.2 72 83.3
Thhalv10012532m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 1.2e-25 119.8 73 82.2
CANSAT56G2947 Cannabis sativa HOM05D004178 ORTHO05D005204 1.6e-25 119.4 70 85.7
Glyma.09G229900 Glycine max HOM05D004178 ORTHO05D005204 1.6e-25 119.4 73 82.2
AL6G18010 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 2.0e-25 119.0 73 82.2
PSO063G1916 Papaver somniferum HOM05D004178 ORTHO05D005204 3.5e-25 118.2 73 80.8
PGR042G0822 Punica granatum HOM05D004178 ORTHO05D005204 3.5e-25 118.2 70 85.7
Potri.003G107700 Populus trichocarpa HOM05D004178 ORTHO05D005204 4.6e-25 117.9 73 83.6
CARHR205510 Cardamine hirsuta HOM05D004178 ORTHO05D005204 5.9e-25 117.5 73 80.8
Cpa.g.sc121.1 Carica papaya HOM05D004178 ORTHO05D005204 5.9e-25 117.5 70 82.9
HPP92_022323 Vanilla planifolia HOM05D004178 ORTHO05D005204 5.9e-25 117.5 73 79.5
HPP92_022331 Vanilla planifolia HOM05D004178 ORTHO05D005204 5.9e-25 117.5 73 79.5
SMO364G0410 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 7.8e-25 117.1 70 82.9
Ca_27645_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 1.0e-24 116.7 72 80.6
PSO782G3243 Papaver somniferum HOM05D004178 ORTHO05D005204 1.0e-24 116.7 73 79.5
SEGI_03190 Sequoiadendron giganteum HOM05D004178 ORTHO05D005204 1.3e-24 116.3 66 87.9
vmacro06815 Vaccinium macrocarpon HOM05D004178 ORTHO05D005204 1.3e-24 116.3 64 90.6
AT5G07660 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 2.3e-24 115.5 73 79.5
ATR0317G120 Amborella trichopoda HOM05D004178 ORTHO05D005204 3.0e-24 115.2 72 79.2
BraA02t04928Z Brassica rapa HOM05D004178 ORTHO05D005204 3.9e-24 114.8 73 80.8
Medtr4g061050 Medicago truncatula HOM05D004178 ORTHO05D005204 3.9e-24 114.8 72 80.6
QL09p005323 Quercus lobata HOM05D004178 ORTHO05D005204 5.0e-24 114.4 67 86.6
AagrBONN_evm.TU.Sc2ySwM_228.971 Anthoceros agrestis HOM05D004178 ORTHO05D005204 8.6e-24 113.6 72 80.6
Pp3c11_11190 Physcomitrium patens HOM05D004178 ORTHO05D005204 1.5e-23 112.8 70 81.4
BcaB05g21602 Brassica carinata HOM05D004178 ORTHO05D005204 7.3e-23 110.5 73 78.1
BcaNung06187 Brassica carinata HOM05D004178 ORTHO05D005204 7.3e-23 110.5 73 78.1
Mapoly0003s0057 Marchantia polymorpha HOM05D004178 ORTHO05D005204 1.8e-21 105.9 69 75.4
CBR_g34600 Chara braunii HOM05D000019 ORTHO05D000048 3.1e-21 105.1 72 68.1
C02p03240 Brassica napus HOM05D004178 ORTHO05D005204 4.0e-21 104.8 66 80.3
FAN10G0409 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.6e-17 92.8 77 62.3
MCO11G708 Micromonas commoda HOM05D004178 ORTHO05D005204 3.1e-13 78.6 73 58.9
AUR62042656 Chenopodium quinoa HOM05D004178 ORTHO05D005204 5.2e-13 77.8 41 90.2
Haze_13892 Corylus avellana HOM05D004178 ORTHO05D005204 4.9e-11 71.2 55 67.3
PRCOL_00006025 Prasinoderma coloniale HOM05D004178 ORTHO05D005204 8.3e-11 70.5 74 47.3
Haze_26632 Corylus avellana HOM05D004178 ORTHO05D005204 1.6e-09 66.2 73 43.8
Cfa025728 Carpinus fangiana HOM05D004178 ORTHO05D005204 2.7e-09 65.5 75 46.7
Cre12.g525100 Chlamydomonas reinhardtii HOM05D004178 ORTHO05D005204 2.7e-09 65.5 81 42.0
Cre12.g525050 Chlamydomonas reinhardtii HOM05D004178 ORTHO05D005204 1.0e-08 63.5 70 48.6
Duzib084G0917 Durio zibethinus HOM05D004178 ORTHO05D005204 8.6e-08 60.5 39 76.9


User provided reference genes

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