Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 9.8e-115 416.8 205 100.0
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 7.3e-86 320.9 195 80.5
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 1.6e-85 319.7 190 80.5
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 3.6e-85 318.5 188 80.3
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 8.1e-85 317.4 185 82.2
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 8.1e-85 317.4 180 85.0
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 3.1e-84 315.5 189 79.9
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 3.1e-84 315.5 185 81.1
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 4.0e-84 315.1 169 89.9
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 5.3e-84 314.7 191 78.0
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 1.5e-83 313.2 180 82.8
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 1.5e-83 313.2 191 77.5
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 2.6e-83 312.4 180 83.3
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 4.5e-83 311.6 191 77.0
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 5.8e-83 311.2 173 86.7
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 2.2e-82 309.3 185 80.0
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.9e-82 308.9 185 80.0
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 3.8e-82 308.5 185 79.5
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.4e-81 306.6 185 79.5
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 1.9e-81 306.2 170 83.5
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 4.2e-81 305.1 182 78.6
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 4.2e-81 305.1 182 78.0
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 9.3e-81 303.9 185 78.9
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 9.3e-81 303.9 180 81.1
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 1.2e-80 303.5 189 76.7
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 1.6e-80 303.1 201 73.6
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 2.1e-80 302.8 187 77.0
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 2.1e-80 302.8 185 76.2
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.1e-80 302.8 171 83.6
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 3.5e-80 302.0 188 75.0
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 4.6e-80 301.6 190 75.3
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 5.1e-79 298.1 192 76.6
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 1.1e-78 297.0 185 75.1
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 1.1e-78 297.0 180 77.2
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 1.5e-78 296.6 191 71.7
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 1.5e-78 296.6 178 74.7
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 2.5e-78 295.8 180 78.3
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 3.3e-78 295.4 187 73.8
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 3.3e-78 295.4 181 74.6
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 4.3e-78 295.0 188 75.5
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 5.6e-78 294.7 178 77.5
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 5.6e-78 294.7 178 77.5
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 7.4e-78 294.3 182 74.7
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 1.3e-77 293.5 169 81.7
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 2.1e-77 292.7 180 77.2
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 4.8e-77 291.6 183 72.7
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 4.8e-77 291.6 169 81.7
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 6.2e-77 291.2 169 80.5
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 1.1e-76 290.4 180 80.0
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 1.1e-76 290.4 187 73.8
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 1.8e-76 289.7 185 73.5
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 1.8e-76 289.7 169 79.9
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 2.4e-76 289.3 169 82.2
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 3.1e-76 288.9 178 75.3
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 5.3e-76 288.1 211 70.6
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 1.5e-75 286.6 184 71.7
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 1.5e-75 286.6 165 81.8
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 2.0e-75 286.2 180 76.7
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 2.6e-75 285.8 169 78.1
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 3.4e-75 285.4 190 72.1
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 1.3e-74 283.5 187 70.1
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 2.2e-74 282.7 169 79.9
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 2.9e-74 282.3 171 73.7
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 3.8e-74 282.0 169 80.5
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 3.8e-74 282.0 169 79.9
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 3.8e-74 282.0 221 64.7
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 3.8e-74 282.0 193 69.4
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 8.4e-74 280.8 169 79.9
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 1.9e-73 279.6 169 79.3
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 1.9e-73 279.6 192 69.8
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 2.4e-73 279.3 169 78.1
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 2.4e-73 279.3 185 70.8
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 7.1e-73 277.7 170 78.8
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 7.1e-73 277.7 170 78.8
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 7.1e-73 277.7 170 78.8
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 7.1e-73 277.7 170 79.4
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 9.3e-73 277.3 170 79.4
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 9.3e-73 277.3 187 71.1
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.6e-72 276.6 185 75.1
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 2.1e-72 276.2 170 79.4
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 6.0e-72 274.6 186 72.0
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 1.8e-71 273.1 169 77.5
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 1.8e-71 273.1 170 75.3
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 2.3e-71 272.7 169 78.1
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 3.0e-71 272.3 182 70.9
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 1.3e-69 266.9 171 71.3
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 3.7e-69 265.4 187 66.8
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 1.4e-68 263.5 191 67.5
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 1.9e-65 253.1 161 70.8
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 6.0e-64 248.1 169 71.6
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 2.3e-63 246.1 180 65.6
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 2.3e-63 246.1 180 65.6
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 1.9e-62 243.0 169 66.3
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 3.3e-62 242.3 175 66.9
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 1.3e-61 240.4 169 65.1
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 4.8e-61 238.4 134 81.3
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 1.8e-60 236.5 186 60.8
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 4.1e-60 235.3 187 61.0
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 8.5e-58 227.6 170 62.9
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 1.5e-54 216.9 190 58.4
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 6.9e-52 208.0 116 80.2
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 3.2e-49 199.1 115 79.1
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 1.6e-48 196.8 117 76.9
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 1.0e-47 194.1 116 78.4
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 6.7e-47 191.4 186 53.8
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 6.7e-47 191.4 117 77.8
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 2.0e-46 189.9 151 59.6
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 4.7e-40 168.7 130 64.6
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 1.0e-39 167.5 189 48.7
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 9.1e-20 101.3 56 87.5
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 5.0e-18 95.5 51 82.4
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 1.9e-17 93.6 177 36.7
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 1.6e-11 73.9 163 30.7
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.6e-11 73.9 45 71.1
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 5.0e-10 68.9 152 27.0
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 1.1e-09 67.8 41 78.0
PRCOL_00005231 Prasinoderma coloniale HOM05D007129 ORTHO05D008680 1.2e-06 57.8 73 41.1
SalBow6G7050 Salvia bowleyana HOM05D007129 ORTHO05D008680 1.2e-06 57.8 63 46.0
Oeu016337.1 Olea europaea HOM05D007129 ORTHO05D008680 1.5e-06 57.4 109 35.8
Solyc03g113880.4 Solanum lycopersicum HOM05D007129 ORTHO05D008680 2.6e-06 56.6 84 39.3
Sopen03g032940 Solanum pennellii HOM05D007129 ORTHO05D008680 2.6e-06 56.6 84 39.3
PGSC0003DMG401024472 Solanum tuberosum HOM05D007129 ORTHO05D008680 2.6e-06 56.6 84 39.3
Ah.11g046160 Amaranthus hybridus HOM05D000306 ORTHO05D003182 3.4e-06 56.2 74 43.2
MSTRG.9665 Avicennia marina HOM05D007129 ORTHO05D008680 3.4e-06 56.2 48 56.2
EL10Ac5g10824 Beta vulgaris HOM05D007129 ORTHO05D008680 3.4e-06 56.2 88 37.5
CAN.G853.11 Capsicum annuum HOM05D007129 ORTHO05D008680 3.4e-06 56.2 84 39.3
COL.COLO4_04322 Corchorus olitorius HOM05D002131 ORTHO05D008680 3.4e-06 56.2 115 35.7
SGA_v2.0_scaffold7G04113 Striga asiatica HOM05D007129 ORTHO05D008680 3.4e-06 56.2 63 44.4
Peaxi162Scf00017g02522 Petunia axillaris HOM05D007129 ORTHO05D008680 5.7e-06 55.5 84 39.3
TWI15G0302 Tripterygium wilfordii HOM05D007129 ORTHO05D008680 9.8e-06 54.7 66 40.9


User provided reference genes

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