Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01008210001 Vitis vinifera HOM05D000251 ORTHO05D007889 3.7e-41 171.0 80 100.0
GSVIVG01008206001 Vitis vinifera HOM05D000251 ORTHO05D007889 2.5e-26 121.7 73 80.8
COL.COLO4_32187 Corchorus olitorius HOM05D000251 ORTHO05D007889 1.3e-25 119.4 73 78.1
Manes.05G117300 Manihot esculenta HOM05D000251 ORTHO05D007889 1.3e-25 119.4 73 78.1
Solyc03g114410.3 Solanum lycopersicum HOM05D000251 ORTHO05D007889 1.7e-25 119.0 73 79.5
Sopen03g033510 Solanum pennellii HOM05D000251 ORTHO05D007889 1.7e-25 119.0 73 79.5
Nn4g23656 Nelumbo nucifera HOM05D000251 ORTHO05D007889 2.2e-25 118.6 73 76.7
Rhsim08G0149100 Rhododendron simsii HOM05D000251 ORTHO05D007889 2.2e-25 118.6 73 75.3
Nitab4.5_0004342g0020 Nicotiana tabacum HOM05D000251 ORTHO05D007889 2.8e-25 118.2 73 79.5
Dinv36870 Davidia involucrata HOM05D000251 ORTHO05D007889 4.8e-25 117.5 73 75.3
Thecc.03G114900 Theobroma cacao HOM05D000251 ORTHO05D007889 6.3e-25 117.1 73 76.7
CAN.G781.3 Capsicum annuum HOM05D000251 ORTHO05D007889 8.2e-25 116.7 73 78.1
Ciclev10018692m.g Citrus clementina HOM05D000251 ORTHO05D007889 8.2e-25 116.7 73 75.3
Cfa019845 Carpinus fangiana HOM05D000251 ORTHO05D007889 1.1e-24 116.3 73 75.3
SGA_v2.0_scaffold283G46981 Striga asiatica HOM05D000251 ORTHO05D007889 1.1e-24 116.3 73 74.0
DCAR_015126 Daucus carota HOM05D000251 ORTHO05D007889 1.4e-24 115.9 73 72.6
Nitab4.5_0000646g0050 Nicotiana tabacum HOM05D000251 ORTHO05D007889 1.4e-24 115.9 73 78.1
QL10p022316 Quercus lobata HOM05D000251 ORTHO05D007889 1.4e-24 115.9 73 74.0
SalBow2G1753 Salvia bowleyana HOM05D000251 ORTHO05D007889 1.4e-24 115.9 73 74.0
CiPaw.15G123200 Carya illinoinensis HOM05D000251 ORTHO05D007889 1.8e-24 115.5 73 74.0
Migut.G01282 Erythranthe guttata HOM05D000251 ORTHO05D007889 1.8e-24 115.5 73 72.6
Gohir.A03G074400 Gossypium hirsutum HOM05D000251 ORTHO05D007889 1.8e-24 115.5 73 76.7
CSS0040641 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D007889 2.4e-24 115.2 73 72.6
Duzib205G0552 Durio zibethinus HOM05D000251 ORTHO05D007889 2.4e-24 115.2 73 74.0
Hma1.2p1_0595F.1_g186100 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 3.1e-24 114.8 73 74.0
Lsat_1_v5_gn_5_24161 Lactuca sativa HOM05D000251 ORTHO05D007889 3.1e-24 114.8 73 72.6
Gohir.D03G100900 Gossypium hirsutum HOM05D000251 ORTHO05D007889 6.9e-24 113.6 73 75.3
Gorai.003G106300 Gossypium raimondii HOM05D000251 ORTHO05D007889 6.9e-24 113.6 73 75.3
Lj9C433G11 Lonicera japonica HOM05D000251 ORTHO05D007889 6.9e-24 113.6 73 71.2
Atru.chr9.705 Acer truncatum HOM05D000251 ORTHO05D007889 9.1e-24 113.2 73 71.2
ClCG06G015150 Citrullus lanatus HOM05D000251 ORTHO05D007889 9.1e-24 113.2 73 72.6
CsaV3_1G003490 Cucumis sativus L. HOM05D000251 ORTHO05D007889 9.1e-24 113.2 73 72.6
Prupe.5G214300 Prunus persica HOM05D000251 ORTHO05D007889 9.1e-24 113.2 73 72.6
MELO3C017274.2 Cucumis melo HOM05D000251 ORTHO05D007889 1.2e-23 112.8 73 72.6
MD14G1219700 Malus domestica HOM05D000251 ORTHO05D007889 1.2e-23 112.8 73 71.2
Potri.012G058100 Populus trichocarpa HOM05D000251 ORTHO05D007889 1.2e-23 112.8 73 72.6
Actinidia31039 Actinidia chinensis HOM05D000251 ORTHO05D007889 1.5e-23 112.5 73 69.9
ECA246G2449 Erigeron canadensis HOM05D000251 ORTHO05D007889 1.5e-23 112.5 73 72.6
FvH4_5g12911 Fragaria vesca HOM05D000251 ORTHO05D007889 1.5e-23 112.5 73 71.2
FAN18G2230 Fragaria x ananassa HOM05D000251 ORTHO05D007889 1.5e-23 112.5 73 71.2
HanXRQChr05g0157761 Helianthus annuus HOM05D000251 ORTHO05D007889 1.5e-23 112.5 73 71.2
Lalb_Chr12g0197521 Lupinus albus HOM05D000251 ORTHO05D007889 1.5e-23 112.5 73 72.6
RcHm_v2.0_Chr7g0184311 Rosa chinensis HOM05D000251 ORTHO05D007889 1.5e-23 112.5 73 71.2
Sed0011411 Sechium edule HOM05D000251 ORTHO05D007889 1.5e-23 112.5 73 72.6
Eucgr.K02644 Eucalyptus grandis HOM05D000251 ORTHO05D007889 2.0e-23 112.1 73 72.6
Peaxi162Scf00017g03036 Petunia axillaris HOM05D000251 ORTHO05D007889 2.0e-23 112.1 73 76.7
CANSAT80G2803 Cannabis sativa HOM05D000251 ORTHO05D007889 2.6e-23 111.7 73 69.9
FAN18G3790 Fragaria x ananassa HOM05D000251 ORTHO05D007889 2.6e-23 111.7 72 72.2
FAN13G2548 Fragaria x ananassa HOM05D000251 ORTHO05D000414 3.4e-23 111.3 73 69.9
Hund02531 Selenicereus undatus HOM05D000251 ORTHO05D007889 3.4e-23 111.3 73 72.6
MD06G1209200 Malus domestica HOM05D000251 ORTHO05D007889 4.5e-23 110.9 73 71.2
PGR044G2008 Punica granatum HOM05D000251 ORTHO05D007889 4.5e-23 110.9 73 71.2
Aqoxy3G00409 Aquilegia oxysepala HOM05D000251 ORTHO05D007889 5.9e-23 110.5 73 71.2
Glyma.17G123700 Glycine max HOM05D000251 ORTHO05D007889 5.9e-23 110.5 73 68.5
TAR622G0769 Trochodendron aralioides HOM05D000251 ORTHO05D007889 5.9e-23 110.5 73 71.2
AUR62032169 Chenopodium quinoa HOM05D000251 ORTHO05D007889 7.7e-23 110.2 73 72.6
AUR62036928 Chenopodium quinoa HOM05D000251 ORTHO05D007889 7.7e-23 110.2 73 72.6
AL6G34270 Arabidopsis lyrata HOM05D000251 ORTHO05D007889 1.0e-22 109.8 73 71.2
ATR0723G093 Amborella trichopoda HOM05D000251 ORTHO05D007889 1.3e-22 109.4 71 69.0
A03p46430 Brassica napus HOM05D000251 ORTHO05D007889 1.3e-22 109.4 73 71.2
BraA03t13769Z Brassica rapa HOM05D000251 ORTHO05D007889 1.3e-22 109.4 73 71.2
CDE08G0099 Ceratophyllum demersum HOM05D000251 ORTHO05D007889 1.3e-22 109.4 73 69.9
Sabra12G0041800 Salix brachista HOM05D000251 ORTHO05D007889 1.3e-22 109.4 73 69.9
Sc10g0009620 Simmondsia chinensis HOM05D000251 ORTHO05D007889 1.3e-22 109.4 73 71.2
TWI81G0067 Tripterygium wilfordii HOM05D000251 ORTHO05D007889 1.3e-22 109.4 73 71.2
BcaC04g23479 Brassica carinata HOM05D000251 ORTHO05D007889 2.2e-22 108.6 73 69.9
BolC9t53705H Brassica oleracea HOM05D000251 ORTHO05D007889 2.2e-22 108.6 73 69.9
Carub.0006s2087 Capsella rubella HOM05D000251 ORTHO05D007889 2.2e-22 108.6 73 69.9
Cc04_g07720 Coffea canephora HOM05D000251 ORTHO05D007889 2.2e-22 108.6 73 71.2
Thhalv10003608m.g Eutrema salsugineum HOM05D000251 ORTHO05D007889 2.2e-22 108.6 73 69.9
Lj4g0022759 Lotus japonicus HOM05D000251 ORTHO05D007889 2.2e-22 108.6 73 68.5
AT5G23080 Arabidopsis thaliana HOM05D000251 ORTHO05D007889 2.9e-22 108.2 73 69.9
C07p44450 Brassica napus HOM05D000251 ORTHO05D007889 2.9e-22 108.2 73 69.9
BolC7t44966H Brassica oleracea HOM05D000251 ORTHO05D007889 2.9e-22 108.2 73 69.9
VMungo1215G2774 Vigna mungo HOM05D000251 ORTHO05D007889 2.9e-22 108.2 73 68.5
Glyma.05G015200 Glycine max HOM05D000251 ORTHO05D007889 3.8e-22 107.8 73 68.5
Psat4g045640 Pisum sativum HOM05D000251 ORTHO05D007889 3.8e-22 107.8 73 68.5
A09p07070 Brassica napus HOM05D000251 ORTHO05D007889 5.0e-22 107.5 73 68.5
Ca_02522_v3 Cicer arietinum L. HOM05D000251 ORTHO05D007889 5.0e-22 107.5 73 68.5
Sp2g24040 Schrenkiella parvula HOM05D000251 ORTHO05D007889 5.0e-22 107.5 73 68.5
arahy.Tifrunner.gnm1.ann1.MAJ7P0 Arachis hypogaea HOM05D000251 ORTHO05D007889 6.5e-22 107.1 73 67.1
TPR.G2793 Trifolium pratense HOM05D000251 ORTHO05D007889 6.5e-22 107.1 73 67.1
Aa31LG11G2570 Aethionema arabicum HOM05D000251 ORTHO05D007889 8.5e-22 106.7 73 68.5
arahy.Tifrunner.gnm1.ann1.ESZ5GR Arachis hypogaea HOM05D000251 ORTHO05D007889 8.5e-22 106.7 73 67.1
BcaB04g19889 Brassica carinata HOM05D000251 ORTHO05D007889 8.5e-22 106.7 73 68.5
C09p07920 Brassica napus HOM05D000251 ORTHO05D007889 1.1e-21 106.3 73 68.5
Medtr4g112420 Medicago truncatula HOM05D000251 ORTHO05D007889 1.1e-21 106.3 73 67.1
BraA09t36355Z Brassica rapa HOM05D000251 ORTHO05D007889 1.4e-21 105.9 73 68.5
PSO017G5760 Papaver somniferum HOM05D000251 ORTHO05D007889 5.5e-21 104.0 73 67.1
THA.LOC104819385 Tarenaya hassleriana HOM05D000251 ORTHO05D007889 5.5e-21 104.0 73 67.1
Rhsim08G0139200 Rhododendron simsii HOM05D000251 ORTHO05D007889 7.2e-21 103.6 100 55.0
PSO478G4362 Papaver somniferum HOM05D000251 ORTHO05D007889 9.4e-21 103.2 73 67.1
SHI18972 Sapria himalayana HOM05D000251 ORTHO05D007889 9.4e-21 103.2 63 76.2
Os06g0489200 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D007889 1.2e-20 102.8 73 65.8
SEGI_18733 Sequoiadendron giganteum HOM05D000251 ORTHO05D007889 2.1e-20 102.1 73 64.4
unitig_736.g22471 Utricularia gibba HOM05D000251 ORTHO05D007889 2.7e-20 101.7 63 73.0
EL10Ac5g11229 Beta vulgaris HOM05D000251 ORTHO05D007889 7.9e-20 100.1 73 64.4
Cpa.g.sc13.78 Carica papaya HOM05D000251 ORTHO05D007889 1.4e-19 99.4 63 73.0
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 2.0e-18 95.5 72 59.7
Ah.02g114430 Amaranthus hybridus HOM05D000169 ORTHO05D000542 1.3e-17 92.8 62 67.7
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 4.8e-17 90.9 73 58.9
AagrBONN_evm.TU.Sc2ySwM_344.5190 Anthoceros agrestis HOM05D000251 ORTHO05D007889 3.1e-16 88.2 73 54.8
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 2.0e-15 85.5 70 58.6
SMO358G0348 Selaginella moellendorffii HOM05D000251 ORTHO05D007889 4.5e-15 84.3 70 50.0
CBR_g57132 Chara braunii HOM05D000251 ORTHO05D007889 2.9e-14 81.6 73 50.7
Cre13.g568700 Chlamydomonas reinhardtii HOM05D000251 ORTHO05D007889 3.6e-12 74.7 62 56.5
Cfa026338 Carpinus fangiana HOM05D000251 ORTHO05D007889 7.5e-10 67.0 68 48.5
vmacro17646 Vaccinium macrocarpon HOM05D000251 ORTHO05D007889 1.4e-08 62.8 76 48.7


User provided reference genes

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