Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01007403001 Vitis vinifera HOM05D004152 ORTHO05D004878 3.7e-91 338.2 172 100.0
Oeu047732.1 Olea europaea HOM05D004152 ORTHO05D004878 9.7e-23 110.9 157 49.7
FAN08G2273 Fragaria x ananassa HOM05D004152 ORTHO05D004878 4.1e-21 105.5 203 41.4
Lj8A267T12 Lonicera japonica HOM05D004152 ORTHO05D004878 1.2e-20 104.0 151 49.7
FAN13G0727 Fragaria x ananassa HOM05D004152 ORTHO05D004878 2.6e-20 102.8 203 39.4
CANSAT21G2552 Cannabis sativa HOM05D004152 ORTHO05D004878 3.4e-20 102.4 207 39.6
FAN18G1702 Fragaria x ananassa HOM05D004152 ORTHO05D004878 3.4e-20 102.4 201 38.3
FvH4_5g19250 Fragaria vesca HOM05D004152 ORTHO05D004878 1.9e-18 96.7 205 39.0
Aqoxy7G00694 Aquilegia oxysepala HOM05D004152 ORTHO05D004878 2.5e-18 96.3 209 37.8
arahy.Tifrunner.gnm1.ann1.HAI1EF Arachis hypogaea HOM05D004152 ORTHO05D004878 4.2e-18 95.5 191 37.2
MD04G1062100 Malus domestica HOM05D004152 ORTHO05D004878 4.2e-18 95.5 202 38.6
Gohir.A03G168700 Gossypium hirsutum HOM05D004152 ORTHO05D004878 7.2e-18 94.7 109 50.5
Prupe.5G066300 Prunus persica HOM05D004152 ORTHO05D004878 1.6e-17 93.6 197 35.5
Sabra03G0074600 Salix brachista HOM05D004152 ORTHO05D004878 2.1e-17 93.2 210 36.7
FAN04G2897 Fragaria x ananassa HOM05D004152 ORTHO05D004878 4.7e-17 92.0 205 37.6
Lj8A266T18 Lonicera japonica HOM05D004152 ORTHO05D004878 4.7e-17 92.0 151 47.7
DCAR_002274 Daucus carota HOM05D004152 ORTHO05D004878 7.9e-17 91.3 205 38.0
MD06G1055800 Malus domestica HOM05D004152 ORTHO05D004878 1.4e-16 90.5 203 38.4
Aqoxy7G00850 Aquilegia oxysepala HOM05D004152 ORTHO05D004878 2.3e-16 89.7 210 36.7
CAN.G62.23 Capsicum annuum HOM05D004152 ORTHO05D004878 2.3e-16 89.7 130 44.6
Dinv39162 Davidia involucrata HOM05D004152 ORTHO05D004878 3.9e-16 89.0 145 41.4
Potri.003G107800 Populus trichocarpa HOM05D004152 ORTHO05D004878 3.9e-16 89.0 206 35.9
Gohir.A04G110300 Gossypium hirsutum HOM05D004152 ORTHO05D004878 5.1e-16 88.6 190 39.5
TWI60G0584 Tripterygium wilfordii HOM05D004152 ORTHO05D004878 6.7e-16 88.2 205 36.1
Lj2C222T2 Lonicera japonica HOM05D004152 ORTHO05D004878 8.8e-16 87.8 197 38.1
HanXRQChr03g0088791 Helianthus annuus HOM05D004152 ORTHO05D004878 1.1e-15 87.4 213 35.7
QL12p011587 Quercus lobata HOM05D004152 ORTHO05D004878 1.1e-15 87.4 217 39.2
Sc10g0005540 Simmondsia chinensis HOM05D004152 ORTHO05D004878 1.1e-15 87.4 205 39.0
Aa31LG10G13480 Aethionema arabicum HOM05D004152 ORTHO05D004878 2.6e-15 86.3 199 35.2
Nitab4.5_0000618g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 2.6e-15 86.3 168 38.7
AUR62007107 Chenopodium quinoa HOM05D004152 ORTHO05D004878 4.4e-15 85.5 205 35.1
COL.COLO4_08312 Corchorus olitorius HOM05D004152 ORTHO05D004878 4.4e-15 85.5 202 35.1
Lsat_1_v5_gn_6_92521 Lactuca sativa HOM05D004152 ORTHO05D004878 4.4e-15 85.5 207 38.2
Nitab4.5_0002881g0050 Nicotiana tabacum HOM05D004152 ORTHO05D004878 4.4e-15 85.5 168 38.7
AT3G58990 Arabidopsis thaliana HOM05D004152 ORTHO05D004878 5.7e-15 85.1 198 33.3
arahy.Tifrunner.gnm1.ann1.Y2K32V Arachis hypogaea HOM05D004152 ORTHO05D004878 5.7e-15 85.1 191 35.1
Solyc06g060790.1 Solanum lycopersicum HOM05D004152 ORTHO05D004878 5.7e-15 85.1 210 39.0
Sopen06g020930 Solanum pennellii HOM05D004152 ORTHO05D004878 5.7e-15 85.1 207 39.1
PGSC0003DMG400024154 Solanum tuberosum HOM05D004152 ORTHO05D004878 5.7e-15 85.1 215 38.6
Manes.01G082700 Manihot esculenta HOM05D004152 ORTHO05D004878 7.4e-15 84.7 163 38.0
Medtr4g011180 Medicago truncatula HOM05D004152 ORTHO05D004878 9.7e-15 84.3 223 35.0
Nn6g33894 Nelumbo nucifera HOM05D004152 ORTHO05D004878 9.7e-15 84.3 201 33.8
CARHR169370 Cardamine hirsuta HOM05D004152 ORTHO05D004878 1.3e-14 84.0 212 34.4
Gohir.D04G150500 Gossypium hirsutum HOM05D004152 ORTHO05D004878 1.3e-14 84.0 185 38.9
Gohir.D04G150600 Gossypium hirsutum HOM05D004152 ORTHO05D004878 1.3e-14 84.0 185 38.9
ECA240G2077 Erigeron canadensis HOM05D004152 ORTHO05D004878 1.7e-14 83.6 164 37.2
Gorai.012G137200 Gossypium raimondii HOM05D004152 ORTHO05D004878 1.7e-14 83.6 200 38.0
Nitab4.5_0002881g0130 Nicotiana tabacum HOM05D004152 ORTHO05D004878 1.7e-14 83.6 136 41.9
Ca_20428_v3 Cicer arietinum L. HOM05D004152 ORTHO05D004878 2.2e-14 83.2 205 36.6
ClCG01G004210 Citrullus lanatus HOM05D004152 ORTHO05D004878 2.2e-14 83.2 210 35.2
Gohir.D02G191900 Gossypium hirsutum HOM05D004152 ORTHO05D004878 2.8e-14 82.8 146 38.4
Cpa.g.sc29.188 Carica papaya HOM05D004152 ORTHO05D004878 3.7e-14 82.4 199 35.7
CiPaw.16G091100 Carya illinoinensis HOM05D004152 ORTHO05D004878 3.7e-14 82.4 205 36.6
Ah.12g054170 Amaranthus hybridus HOM05D004152 ORTHO05D004878 4.8e-14 82.0 203 35.0
AUR62019969 Chenopodium quinoa HOM05D004152 ORTHO05D004878 4.8e-14 82.0 209 34.4
Duzib052G0353 Durio zibethinus HOM05D004152 ORTHO05D004878 4.8e-14 82.0 169 37.3
HanXRQChr13g0417841 Helianthus annuus HOM05D004152 ORTHO05D004878 4.8e-14 82.0 198 35.4
BraA03t11610Z Brassica rapa HOM05D004152 ORTHO05D004878 6.3e-14 81.6 182 34.1
BraA05t19344Z Brassica rapa HOM05D004152 ORTHO05D004878 6.3e-14 81.6 212 34.4
Actinidia10839 Actinidia chinensis HOM05D004152 ORTHO05D004878 8.2e-14 81.3 207 36.2
BcaNung03538 Brassica carinata HOM05D004152 ORTHO05D004878 8.2e-14 81.3 207 34.3
Gorai.005G214700 Gossypium raimondii HOM05D004152 ORTHO05D004878 8.2e-14 81.3 177 36.7
A03p23950 Brassica napus HOM05D004152 ORTHO05D004878 1.1e-13 80.9 182 34.1
EL10Ac5g12362 Beta vulgaris HOM05D004152 ORTHO05D004878 1.4e-13 80.5 207 36.2
Lalb_Chr25g0279491 Lupinus albus HOM05D004152 ORTHO05D004878 1.4e-13 80.5 164 36.6
TAR629G1833 Trochodendron aralioides HOM05D004152 ORTHO05D004878 1.4e-13 80.5 196 36.7
PGR031G2826 Punica granatum HOM05D004152 ORTHO05D004878 1.8e-13 80.1 168 36.3
Rhsim07G0110300 Rhododendron simsii HOM05D004152 ORTHO05D004878 1.8e-13 80.1 205 36.1
TWI81G0703 Tripterygium wilfordii HOM05D004152 ORTHO05D004878 1.8e-13 80.1 204 34.3
AL5G40810 Arabidopsis lyrata HOM05D004152 ORTHO05D004878 2.4e-13 79.7 201 33.8
Carub.0002s0595 Capsella rubella HOM05D004152 ORTHO05D004878 2.4e-13 79.7 204 33.8
CARHR169410 Cardamine hirsuta HOM05D004152 ORTHO05D004878 2.4e-13 79.7 201 33.8
Peaxi162Scf01022g00023 Petunia axillaris HOM05D004152 ORTHO05D004878 2.4e-13 79.7 208 34.6
Thecc.02G150400 Theobroma cacao HOM05D004152 ORTHO05D004878 2.4e-13 79.7 213 36.2
CsaV3_5G004400 Cucumis sativus L. HOM05D004152 ORTHO05D004878 3.1e-13 79.3 199 35.7
THA.LOC104824129 Tarenaya hassleriana HOM05D004152 ORTHO05D004878 4.1e-13 79.0 212 34.0
Haze_18794 Corylus avellana HOM05D004152 ORTHO05D004878 5.3e-13 78.6 205 34.6
Lj3g0007947 Lotus japonicus HOM05D004152 ORTHO05D004878 5.3e-13 78.6 208 36.5
BcaC02g12415 Brassica carinata HOM05D004152 ORTHO05D004878 6.9e-13 78.2 191 33.5
Ciclev10021871m.g Citrus clementina HOM05D004152 ORTHO05D004878 6.9e-13 78.2 202 33.2
CARHR138170 Cardamine hirsuta HOM05D004152 ORTHO05D004878 9.1e-13 77.8 194 36.1
DCAR_008502 Daucus carota HOM05D004152 ORTHO05D004878 9.1e-13 77.8 202 32.7
Thhalv10017142m.g Eutrema salsugineum HOM05D004152 ORTHO05D004878 9.1e-13 77.8 212 33.0
Aa31LG1G24910 Aethionema arabicum HOM05D004152 ORTHO05D004878 1.2e-12 77.4 209 32.5
Migut.A01125 Erythranthe guttata HOM05D004152 ORTHO05D004878 1.2e-12 77.4 141 36.9
BcaC01g05264 Brassica carinata HOM05D004152 ORTHO05D004878 1.5e-12 77.0 176 35.2
Carub.0005s2573 Capsella rubella HOM05D004152 ORTHO05D004878 1.5e-12 77.0 202 32.2
Cfa019694 Carpinus fangiana HOM05D004152 ORTHO05D004878 1.5e-12 77.0 208 35.6
Sp4g25220 Schrenkiella parvula HOM05D004152 ORTHO05D004878 1.5e-12 77.0 212 33.0
AT2G43090 Arabidopsis thaliana HOM05D004152 ORTHO05D004878 2.0e-12 76.6 215 34.0
Glyma.07G032200 Glycine max HOM05D004152 ORTHO05D004878 2.0e-12 76.6 193 34.7
Oeu040710.1 Olea europaea HOM05D004152 ORTHO05D004878 2.0e-12 76.6 218 34.4
BolC4t22054H Brassica oleracea HOM05D004152 ORTHO05D004878 2.6e-12 76.3 216 33.3
Carub.0004s2557 Capsella rubella HOM05D004152 ORTHO05D004878 2.6e-12 76.3 214 33.2
Psat7g255640 Pisum sativum HOM05D004152 ORTHO05D004878 2.6e-12 76.3 224 34.4
Hund14573 Selenicereus undatus HOM05D004152 ORTHO05D004878 2.6e-12 76.3 161 37.9
SGA_v2.0_scaffold104G30172 Striga asiatica HOM05D004152 ORTHO05D004878 2.6e-12 76.3 221 35.3
VMungo0331G1163 Vigna mungo HOM05D004152 ORTHO05D004878 2.6e-12 76.3 199 34.2
BraA05t19345Z Brassica rapa HOM05D004152 ORTHO05D004878 3.4e-12 75.9 190 33.2
Phvul.010G153800 Phaseolus vulgaris HOM05D004152 ORTHO05D004878 4.5e-12 75.5 201 35.3
Sp4g25230 Schrenkiella parvula HOM05D004152 ORTHO05D004878 4.5e-12 75.5 190 33.2
Aa31LG1G24900 Aethionema arabicum HOM05D004152 ORTHO05D004878 5.9e-12 75.1 213 32.9
AL4G41740 Arabidopsis lyrata HOM05D004152 ORTHO05D004878 5.9e-12 75.1 215 33.5
BcaB01g01073 Brassica carinata HOM05D004152 ORTHO05D004878 5.9e-12 75.1 164 32.9
A05p03590 Brassica napus HOM05D004152 ORTHO05D004878 5.9e-12 75.1 190 33.2
CARHR138160 Cardamine hirsuta HOM05D004152 ORTHO05D004878 5.9e-12 75.1 215 33.0
Sed0004379 Sechium edule HOM05D004152 ORTHO05D004878 5.9e-12 75.1 205 33.2
AT2G43100 Arabidopsis thaliana HOM05D004152 ORTHO05D004878 7.7e-12 74.7 189 33.3
Thhalv10017125m.g Eutrema salsugineum HOM05D004152 ORTHO05D004878 7.7e-12 74.7 193 32.6
Atru.chr9.1286 Acer truncatum HOM05D004152 ORTHO05D004878 1.3e-11 73.9 209 33.5
CSS0047405 Camellia sinensis var. sinensis HOM05D004152 ORTHO05D004878 1.3e-11 73.9 203 35.0
CDE11G0751 Ceratophyllum demersum HOM05D004152 ORTHO05D004878 1.3e-11 73.9 203 32.5
MELO3C005518.2 Cucumis melo HOM05D004152 ORTHO05D004878 1.3e-11 73.9 203 33.5
BcaNung03539 Brassica carinata HOM05D004152 ORTHO05D004878 1.7e-11 73.6 182 32.4
SEGI_19785 Sequoiadendron giganteum HOM05D004152 ORTHO05D004878 1.7e-11 73.6 125 38.4
AL4G41750 Arabidopsis lyrata HOM05D004152 ORTHO05D004878 2.2e-11 73.2 202 31.7
PSO210G0624 Papaver somniferum HOM05D004152 ORTHO05D004878 2.9e-11 72.8 213 32.9
Carub.0004s2558 Capsella rubella HOM05D004152 ORTHO05D004878 3.8e-11 72.4 202 31.7
C03p28570 Brassica napus HOM05D004152 ORTHO05D004878 5.0e-11 72.0 207 31.4
BolC3t15222H Brassica oleracea HOM05D004152 ORTHO05D004878 5.0e-11 72.0 207 31.4
Glyma.08G210500 Glycine max HOM05D004152 ORTHO05D004878 5.0e-11 72.0 198 33.8
unitig_899.g15440 Utricularia gibba HOM05D004152 ORTHO05D004878 5.0e-11 72.0 219 31.1
PSO210G4930 Papaver somniferum HOM05D004152 ORTHO05D004878 8.5e-11 71.2 217 32.7
C04p04150 Brassica napus HOM05D004152 ORTHO05D004878 1.1e-10 70.9 193 31.6
BolC4t22055H Brassica oleracea HOM05D004152 ORTHO05D004878 1.1e-10 70.9 193 31.6
Dinv21650 Davidia involucrata HOM05D004152 ORTHO05D004878 1.1e-10 70.9 38 86.8
THA.LOC104803472 Tarenaya hassleriana HOM05D004152 ORTHO05D004878 1.1e-10 70.9 211 30.8
BcaC02g12414 Brassica carinata HOM05D004152 ORTHO05D004878 1.4e-10 70.5 193 31.6
Cc08_g12220 Coffea canephora HOM05D004152 ORTHO05D004878 4.2e-10 68.9 242 30.2
Nitab4.5_0002372g0010 Nicotiana tabacum HOM05D004152 ORTHO05D004878 7.2e-10 68.2 38 84.2
SalBow6G1227 Salvia bowleyana HOM05D004152 ORTHO05D004878 9.4e-10 67.8 205 33.2
SHI09309 Sapria himalayana HOM05D004152 ORTHO05D004878 1.2e-09 67.4 45 68.9
CDE11G0227 Ceratophyllum demersum HOM05D004152 ORTHO05D004878 1.6e-09 67.0 38 78.9
ATR0693G063 Amborella trichopoda HOM05D004152 ORTHO05D004878 2.1e-09 66.6 57 56.1
ATR0693G400 Amborella trichopoda HOM05D004152 ORTHO05D004878 3.6e-09 65.9 216 31.5
Nitab4.5_0001410g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 6.1e-09 65.1 168 32.7
SalBow1G7183 Salvia bowleyana HOM05D004152 ORTHO05D004878 6.1e-09 65.1 192 34.4
BcaB05g25308 Brassica carinata HOM05D004152 ORTHO05D004878 1.4e-08 63.9 51 56.9
SMO274G0039 Selaginella moellendorffii HOM05D004152 ORTHO05D004878 1.4e-08 63.9 139 33.1
Ah.14g083550 Amaranthus hybridus HOM05D004152 ORTHO05D004878 1.8e-08 63.5 44 72.7
Pp3c1_29090 Physcomitrium patens HOM05D004152 ORTHO05D004878 2.3e-08 63.2 135 32.6
MSTRG.12117 Avicennia marina HOM05D004152 ORTHO05D004878 3.0e-08 62.8 49 63.3
Pp3c14_19120 Physcomitrium patens HOM05D004152 ORTHO05D004878 3.0e-08 62.8 135 34.1
Mapoly0001s0104 Marchantia polymorpha HOM05D004152 ORTHO05D004878 3.9e-08 62.4 147 33.3
Zm00001eb249330 Zea mays HOM05D004152 ORTHO05D004878 3.9e-08 62.4 134 35.1
Lj8A264G55 Lonicera japonica HOM05D004152 ORTHO05D004878 9.7e-07 57.8 38 78.9
Actinidia31515 Actinidia chinensis HOM05D004152 ORTHO05D004878 1.7e-06 57.0 221 29.9
Cre06.g252650 Chlamydomonas reinhardtii HOM05D004152 ORTHO05D004878 2.8e-06 56.2 37 64.9
Os02g0655300 Oryza sativa ssp. japonica HOM05D004152 ORTHO05D004878 6.3e-06 55.1 160 31.2
HPP92_020921 Vanilla planifolia HOM05D004152 ORTHO05D004878 6.3e-06 55.1 190 31.1
EL10Ac5g12363 Beta vulgaris HOM05D004152 ORTHO05D004878 8.2e-06 54.7 201 27.9
TPR.G10893 Trifolium pratense HOM05D004152 ORTHO05D004878 8.2e-06 54.7 29 89.7


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