Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001794001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.3e-41 172.6 81 100.0
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 9.2e-24 113.2 80 68.8
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 1.2e-23 112.8 81 67.9
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 1.6e-23 112.5 81 69.1
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 1.6e-23 112.5 81 69.1
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 1.6e-23 112.5 80 68.8
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 2.0e-23 112.1 80 68.8
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 2.7e-23 111.7 80 68.8
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 2.7e-23 111.7 80 68.8
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 2.7e-23 111.7 83 68.7
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 2.7e-23 111.7 83 68.7
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 1.3e-22 109.4 80 66.2
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 1.7e-22 109.0 80 66.2
CDE12G0612 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 2.3e-22 108.6 82 64.6
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 3.0e-22 108.2 82 64.6
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 3.0e-22 108.2 80 66.2
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 3.9e-22 107.8 80 63.8
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 5.0e-22 107.5 80 63.8
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 5.0e-22 107.5 80 66.2
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 5.0e-22 107.5 78 70.5
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 6.6e-22 107.1 80 66.2
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 8.6e-22 106.7 80 66.2
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 1.1e-21 106.3 80 65.0
MBI04_g46822_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 1.1e-21 106.3 80 65.0
Sc01g0007900 Simmondsia chinensis HOM05D005140 ORTHO05D006288 1.1e-21 106.3 80 66.2
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 1.5e-21 105.9 80 65.0
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla HOM05D005140 ORTHO05D006288 3.3e-21 104.8 80 63.8
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 3.3e-21 104.8 80 62.5
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 4.3e-21 104.4 80 63.8
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 5.6e-21 104.0 80 63.8
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 5.6e-21 104.0 80 63.8
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 5.6e-21 104.0 80 63.8
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 5.6e-21 104.0 80 63.8
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 5.6e-21 104.0 81 61.7
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 5.6e-21 104.0 80 63.8
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 5.6e-21 104.0 80 63.8
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 5.6e-21 104.0 80 65.0
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 5.6e-21 104.0 80 63.8
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 5.6e-21 104.0 80 63.8
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 5.6e-21 104.0 80 62.5
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 5.6e-21 104.0 80 62.5
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 7.3e-21 103.6 80 62.5
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 7.3e-21 103.6 80 61.2
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 7.3e-21 103.6 82 59.8
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 9.5e-21 103.2 80 62.5
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 9.5e-21 103.2 80 62.5
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 9.5e-21 103.2 80 62.5
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 9.5e-21 103.2 80 62.5
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 9.5e-21 103.2 81 63.0
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 9.5e-21 103.2 80 63.8
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 9.5e-21 103.2 80 63.8
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 1.2e-20 102.8 81 60.5
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 1.6e-20 102.4 80 63.8
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 1.6e-20 102.4 80 63.8
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 1.6e-20 102.4 80 63.8
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 1.6e-20 102.4 77 64.9
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 1.6e-20 102.4 77 64.9
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 2.1e-20 102.1 80 63.8
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 2.1e-20 102.1 80 61.2
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 2.1e-20 102.1 80 63.8
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 2.8e-20 101.7 80 63.8
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.8e-20 101.7 80 62.5
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.8e-20 101.7 80 62.5
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.8e-20 101.7 80 62.5
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.8e-20 101.7 80 63.8
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.8e-20 101.7 80 63.8
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 3.6e-20 101.3 80 60.0
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 3.6e-20 101.3 80 61.2
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 3.6e-20 101.3 81 60.5
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 3.6e-20 101.3 80 62.5
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 3.6e-20 101.3 80 62.5
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 3.6e-20 101.3 80 62.5
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 3.6e-20 101.3 80 62.5
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 3.6e-20 101.3 80 62.5
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 4.7e-20 100.9 80 62.5
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 4.7e-20 100.9 80 61.2
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 4.7e-20 100.9 80 62.5
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 4.7e-20 100.9 80 63.8
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 4.7e-20 100.9 80 62.5
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 4.7e-20 100.9 80 61.2
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 6.2e-20 100.5 81 60.5
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 8.0e-20 100.1 80 60.0
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 8.0e-20 100.1 79 64.6
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 1.4e-19 99.4 80 61.2
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 1.4e-19 99.4 80 61.2
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 1.8e-19 99.0 78 64.1
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 1.8e-19 99.0 80 61.2
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 2.3e-19 98.6 80 58.8
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 2.3e-19 98.6 80 61.2
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 2.3e-19 98.6 80 61.2
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 4.0e-19 97.8 79 63.3
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 4.0e-19 97.8 79 63.3
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 4.0e-19 97.8 80 60.0
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 6.8e-19 97.1 80 57.5
Os05g0392100 Oryza sativa ssp. japonica HOM05D005140 ORTHO05D006288 6.8e-19 97.1 80 62.5
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 6.8e-19 97.1 89 57.3
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 6.8e-19 97.1 80 61.2
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 8.9e-19 96.7 80 58.8
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 8.9e-19 96.7 87 54.0
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 1.2e-18 96.3 80 58.8
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 1.5e-18 95.9 80 58.8
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 2.0e-18 95.5 80 58.8
SHI07711 Sapria himalayana HOM05D005140 ORTHO05D006288 2.0e-18 95.5 85 57.6
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 2.0e-18 95.5 80 60.0
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.6e-18 95.1 80 57.5
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 4.4e-18 94.4 91 57.1
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 4.4e-18 94.4 80 57.5
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 5.8e-18 94.0 72 65.3
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 7.5e-18 93.6 80 58.8
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 1.3e-17 92.8 80 58.8
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 1.7e-17 92.4 75 61.3
Peaxi162Scf00715g00010 Petunia axillaris HOM05D005140 ORTHO05D006288 1.7e-17 92.4 80 56.2
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 2.2e-17 92.0 81 56.8
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 3.7e-17 91.3 81 55.6
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 5.4e-16 87.4 118 42.4
SEGI_19334 Sequoiadendron giganteum HOM05D005140 ORTHO05D000001 1.6e-15 85.9 75 57.3
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 2.3e-14 82.0 47 74.5
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 1.5e-13 79.3 43 76.7
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 1.9e-13 79.0 80 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 7.3e-13 77.0 73 56.2
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 4.0e-11 71.2 75 49.3
DCAR_016064 Daucus carota HOM05D005140 ORTHO05D006288 3.4e-10 68.2 49 59.2
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 1.1e-08 63.2 67 46.3
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 1.2e-07 59.7 74 44.6
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 2.7e-07 58.5 82 43.9
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 5.1e-06 54.3 26 88.5


User provided reference genes

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