Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001519001 Vitis vinifera HOM05D005363 ORTHO05D006607 3.8e-67 258.1 134 100.0
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 8.3e-38 160.6 96 85.4
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 3.2e-37 158.7 122 70.5
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 1.6e-36 156.4 96 81.2
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 1.0e-35 153.7 95 82.1
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 5.0e-35 151.4 96 79.2
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 8.6e-35 150.6 98 77.6
THA.LOC104813315 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 1.5e-34 149.8 99 74.7
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 2.5e-34 149.1 96 78.1
Sopen09g004090 Solanum pennellii HOM05D005363 ORTHO05D006607 2.5e-34 149.1 96 76.0
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 3.3e-34 148.7 96 78.1
Cc06_g05460 Coffea canephora HOM05D005363 ORTHO05D006607 3.3e-34 148.7 99 74.7
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 3.3e-34 148.7 96 77.1
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 4.3e-34 148.3 96 79.2
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 4.3e-34 148.3 95 78.9
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 7.3e-34 147.5 99 74.7
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 7.3e-34 147.5 96 76.0
Carub.0008s1460 Capsella rubella HOM05D005363 ORTHO05D006607 9.5e-34 147.1 96 76.0
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 1.2e-33 146.7 96 78.1
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 1.2e-33 146.7 99 74.7
TPR.G32857 Trifolium pratense HOM05D005363 ORTHO05D006607 1.2e-33 146.7 100 73.0
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.6e-33 146.4 96 77.1
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.6e-33 146.4 96 77.1
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 1.6e-33 146.4 96 77.1
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 1.6e-33 146.4 95 77.9
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 2.1e-33 146.0 96 75.0
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 2.8e-33 145.6 95 77.9
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 2.8e-33 145.6 95 75.8
Medtr2g081100 Medicago truncatula HOM05D005363 ORTHO05D006607 2.8e-33 145.6 100 73.0
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 3.6e-33 145.2 99 73.7
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 4.7e-33 144.8 97 75.3
AT5G54260 Arabidopsis thaliana HOM05D005363 ORTHO05D006607 6.2e-33 144.4 96 75.0
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 6.2e-33 144.4 96 75.0
FvH4_3g21040 Fragaria vesca HOM05D005363 ORTHO05D006607 6.2e-33 144.4 95 77.9
FAN11G3021 Fragaria x ananassa HOM05D005363 ORTHO05D006607 6.2e-33 144.4 95 77.9
FAN25G3415 Fragaria x ananassa HOM05D005363 ORTHO05D006607 6.2e-33 144.4 95 77.9
Sp6g16300 Schrenkiella parvula HOM05D005363 ORTHO05D006607 6.2e-33 144.4 96 75.0
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 8.0e-33 144.1 100 73.0
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 8.0e-33 144.1 96 76.0
Eucgr.F01076 Eucalyptus grandis HOM05D005363 ORTHO05D006607 1.0e-32 143.7 96 78.1
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 1.0e-32 143.7 96 75.0
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 1.0e-32 143.7 105 70.5
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 1.4e-32 143.3 96 75.0
AUR62015595 Chenopodium quinoa HOM05D005363 ORTHO05D006607 3.1e-32 142.1 104 68.3
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 3.1e-32 142.1 99 72.7
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 4.0e-32 141.7 95 74.7
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 4.0e-32 141.7 95 74.7
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 5.2e-32 141.4 94 74.5
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 6.8e-32 141.0 96 74.0
BcaB08g35781 Brassica carinata HOM05D005363 ORTHO05D006607 6.8e-32 141.0 94 75.5
Thhalv10012804m.g Eutrema salsugineum HOM05D005363 ORTHO05D006607 8.9e-32 140.6 96 74.0
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 8.9e-32 140.6 96 71.9
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 1.2e-31 140.2 95 75.8
BcaC04g20356 Brassica carinata HOM05D005363 ORTHO05D006607 1.5e-31 139.8 94 74.5
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 2.6e-31 139.0 95 73.7
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 2.6e-31 139.0 95 73.7
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 3.4e-31 138.7 87 81.6
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 4.4e-31 138.3 88 79.5
CARHR267540 Cardamine hirsuta HOM05D005363 ORTHO05D006607 7.5e-31 137.5 94 74.5
PSO210G7030 Papaver somniferum HOM05D005363 ORTHO05D006607 7.5e-31 137.5 95 71.6
PSO832G2870 Papaver somniferum HOM05D005363 ORTHO05D006607 7.5e-31 137.5 95 71.6
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 9.8e-31 137.1 95 72.6
ATR0693G020 Amborella trichopoda HOM05D005363 ORTHO05D006607 1.3e-30 136.7 96 70.8
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 1.7e-30 136.3 98 69.4
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.7e-30 136.3 97 74.2
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 1.7e-30 136.3 96 75.0
A10p11550 Brassica napus HOM05D005363 ORTHO05D006607 4.9e-30 134.8 90 74.4
C09p44570 Brassica napus HOM05D005363 ORTHO05D006607 4.9e-30 134.8 90 74.4
BraA10t43250Z Brassica rapa HOM05D005363 ORTHO05D006607 4.9e-30 134.8 90 74.4
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 6.4e-30 134.4 85 81.2
Aqoxy1G03881 Aquilegia oxysepala HOM05D005363 ORTHO05D006607 8.3e-30 134.0 95 69.5
BolC9t57330H Brassica oleracea HOM05D005363 ORTHO05D006607 1.1e-29 133.7 90 73.3
Atru.chr2.2912 Acer truncatum HOM05D005363 ORTHO05D006607 2.4e-29 132.5 96 72.9
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 2.4e-29 132.5 95 72.6
HPP92_026561 Vanilla planifolia HOM05D005363 ORTHO05D006607 4.1e-29 131.7 95 67.4
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 7.0e-29 131.0 95 74.7
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 7.0e-29 131.0 96 74.0
RhsimUnG0258300 Rhododendron simsii HOM05D005363 ORTHO05D006607 9.2e-29 130.6 88 76.1
Aa31LG3G10220 Aethionema arabicum HOM05D005363 ORTHO05D006607 1.2e-28 130.2 88 73.9
SHI33827 Sapria himalayana HOM05D005363 ORTHO05D006607 2.7e-28 129.0 99 65.7
Zm00001eb069270 Zea mays HOM05D005363 ORTHO05D006607 4.6e-28 128.3 100 63.0
HPP92_026534 Vanilla planifolia HOM05D005363 ORTHO05D006607 7.8e-28 127.5 95 66.3
Os04g0635900 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 1.3e-27 126.7 94 64.9
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 1.7e-27 126.3 114 62.3
CDE12G0487 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 6.6e-27 124.4 91 65.9
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 1.5e-26 123.2 96 65.6
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 2.5e-26 122.5 102 63.7
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 1.6e-25 119.8 96 61.5
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 3.6e-25 118.6 88 69.3
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 4.7e-25 118.2 103 65.0
ClCG11G018480 Citrullus lanatus HOM05D005363 ORTHO05D006607 6.8e-24 114.4 70 81.4
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 6.8e-24 114.4 70 81.4
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 8.9e-24 114.0 85 69.4
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 9.8e-23 110.5 75 74.7
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 1.3e-22 110.2 94 61.7
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 1.3e-22 110.2 94 61.7
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 2.2e-22 109.4 108 55.6
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 2.9e-22 109.0 70 75.7
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 2.4e-21 105.9 74 71.6
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 3.2e-21 105.5 93 58.1
Pp3c24_2350 Physcomitrium patens HOM05D005363 ORTHO05D006607 5.4e-21 104.8 95 55.8
Ca_01800_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 1.3e-19 100.1 69 66.7
Ca_30473_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 1.7e-19 99.8 63 71.4
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis HOM05D005363 ORTHO05D006607 2.5e-18 95.9 99 52.5
Mapoly0023s0117 Marchantia polymorpha HOM05D005363 ORTHO05D006607 1.8e-16 89.7 94 55.3
Eucgr.C01186 Eucalyptus grandis HOM05D005363 ORTHO05D006607 3.1e-16 89.0 75 64.0
SMO347G0170 Selaginella moellendorffii HOM05D005363 ORTHO05D006607 3.1e-16 89.0 88 53.4
SEGI_35588 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 7.6e-15 84.3 64 60.9
FAN16G0276 Fragaria x ananassa HOM05D005363 ORTHO05D006607 2.7e-12 75.9 95 50.5
arahy.Tifrunner.gnm1.ann1.Q8WXS4 Arachis hypogaea HOM05D005363 ORTHO05D006607 4.6e-12 75.1 74 51.4
GSVIVG01001498001 Vitis vinifera HOM05D005363 ORTHO05D438841 3.3e-10 68.9 38 92.1
Os08g0177600 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 6.2e-09 64.7 59 54.2
Zm00001eb171920 Zea mays HOM05D005363 ORTHO05D006607 8.1e-09 64.3 60 51.7
CBR_g48040 Chara braunii HOM05D005363 ORTHO05D006607 1.8e-08 63.2 68 47.1
AUR62029306 Chenopodium quinoa HOM05D005363 ORTHO05D006607 4.0e-08 62.0 38 63.2
unitig_13.g31430 Utricularia gibba HOM05D005363 ORTHO05D006607 1.3e-06 57.0 113 40.7
GSVIVG01001488001 Vitis vinifera HOM05D005363 ORTHO05D006607 1.7e-06 56.6 39 79.5
GSVIVG01004486001 Vitis vinifera HOM05D004774 ORTHO05D005514 1.7e-06 56.6 39 79.5


User provided reference genes

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