Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000883001 Vitis vinifera HOM05D001670 ORTHO05D018202 2.3e-93 345.5 172 100.0
GSVIVG01000874001 Vitis vinifera HOM05D001670 ORTHO05D002980 4.0e-93 344.7 172 99.4
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 3.6e-78 295.0 176 84.1
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 1.5e-76 289.7 176 81.8
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 2.6e-76 288.9 176 81.2
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 1.7e-75 286.2 176 79.5
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 1.7e-75 286.2 176 80.7
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.7e-75 286.2 167 83.2
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 2.2e-75 285.8 176 80.7
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 1.1e-74 283.5 168 81.5
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 7.1e-74 280.8 172 79.7
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 9.2e-74 280.4 168 80.4
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 1.6e-73 279.6 176 79.0
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 1.6e-73 279.6 172 78.5
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 2.1e-73 279.3 176 76.7
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 2.7e-73 278.9 177 77.4
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 2.7e-73 278.9 176 78.4
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 1.3e-72 276.6 176 78.4
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 3.0e-72 275.4 167 80.2
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 3.0e-72 275.4 167 80.2
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 6.6e-72 274.2 177 77.4
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 8.6e-72 273.9 167 79.0
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 8.6e-72 273.9 167 79.0
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 8.6e-72 273.9 167 79.0
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.9e-71 272.7 176 77.3
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 2.5e-71 272.3 176 77.8
Hma1.2p1_0341F.1_g130260 Hydrangea macrophylla HOM05D001670 ORTHO05D002980 2.5e-71 272.3 175 76.6
Gohir.D11G082333 Gossypium hirsutum HOM05D001670 ORTHO05D002980 3.3e-71 271.9 176 77.8
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 3.3e-71 271.9 176 77.8
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 3.3e-71 271.9 176 77.8
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 7.3e-71 270.8 168 79.8
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 9.5e-71 270.4 176 77.3
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 1.2e-70 270.0 176 76.7
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 1.6e-70 269.6 167 79.0
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 2.1e-70 269.2 168 78.0
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 2.8e-70 268.9 167 79.0
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 4.7e-70 268.1 176 77.8
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 6.2e-70 267.7 167 78.4
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 6.2e-70 267.7 176 75.6
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 8.1e-70 267.3 176 76.1
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 1.1e-69 266.9 176 76.7
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 1.4e-69 266.5 167 78.4
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 1.4e-69 266.5 173 76.9
Lj7C538T12 Lonicera japonica HOM05D001670 ORTHO05D002980 1.4e-69 266.5 177 75.1
Cpa.g.sc587.1 Carica papaya HOM05D001670 ORTHO05D002980 1.8e-69 266.2 176 76.1
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.8e-69 266.2 176 75.0
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 1.8e-69 266.2 167 77.8
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 2.3e-69 265.8 167 77.8
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 3.1e-69 265.4 176 76.1
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 4.0e-69 265.0 167 77.8
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 4.0e-69 265.0 167 77.8
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 5.2e-69 264.6 170 77.1
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 6.8e-69 264.2 168 76.8
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 6.8e-69 264.2 168 76.8
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 6.8e-69 264.2 167 77.2
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 1.2e-68 263.5 168 76.8
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 1.5e-68 263.1 174 75.3
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 1.5e-68 263.1 167 76.6
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 2.0e-68 262.7 166 77.7
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 2.0e-68 262.7 167 76.6
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 2.6e-68 262.3 176 75.0
Oeu064576.1 Olea europaea HOM05D001670 ORTHO05D002980 3.4e-68 261.9 176 73.9
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 4.4e-68 261.5 168 78.6
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 4.4e-68 261.5 176 73.9
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 4.4e-68 261.5 167 77.2
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 4.4e-68 261.5 167 76.0
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 5.8e-68 261.2 176 75.0
Haze_02720 Corylus avellana HOM05D001670 ORTHO05D002980 5.8e-68 261.2 176 75.0
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 7.6e-68 260.8 168 76.2
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 9.9e-68 260.4 167 76.6
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 9.9e-68 260.4 167 76.6
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 9.9e-68 260.4 167 76.6
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 9.9e-68 260.4 168 78.0
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 1.7e-67 259.6 168 77.4
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 2.9e-67 258.8 167 76.0
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 2.9e-67 258.8 167 76.6
Psat4g209440 Pisum sativum HOM05D001670 ORTHO05D002980 2.9e-67 258.8 167 76.6
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 3.8e-67 258.5 176 73.9
CDE11G1219 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 4.9e-67 258.1 176 76.1
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 4.9e-67 258.1 176 73.9
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 3.2e-66 255.4 168 79.2
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 9.2e-66 253.8 168 78.0
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 9.2e-66 253.8 168 78.0
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 9.2e-66 253.8 168 78.0
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 9.2e-66 253.8 168 78.0
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 9.2e-66 253.8 168 78.0
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 1.2e-65 253.4 167 77.2
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 4.6e-65 251.5 176 71.0
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 4.6e-65 251.5 169 72.2
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 6.0e-65 251.1 150 81.3
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 6.0e-65 251.1 176 69.3
Actinidia12672 Actinidia chinensis HOM05D001670 ORTHO05D018202 5.1e-64 248.1 186 68.3
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 1.9e-63 246.1 180 71.7
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 2.5e-63 245.7 166 75.3
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 3.3e-63 245.4 170 71.2
AUR62013711 Chenopodium quinoa HOM05D001670 ORTHO05D002980 5.6e-63 244.6 178 73.6
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 9.6e-63 243.8 172 73.8
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 1.6e-62 243.0 175 69.7
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 2.1e-62 242.7 169 73.4
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 3.6e-62 241.9 169 74.6
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 6.2e-62 241.1 172 70.9
AUR62004150 Chenopodium quinoa HOM05D001670 ORTHO05D002980 1.4e-61 240.0 178 71.9
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 1.4e-61 240.0 170 72.9
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 1.8e-61 239.6 162 71.6
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 9.0e-61 237.3 177 68.4
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 1.5e-60 236.5 166 72.3
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 1.5e-60 236.5 168 71.4
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 5.8e-60 234.6 167 70.7
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 9.9e-60 233.8 176 69.9
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 2.2e-59 232.6 177 68.9
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 2.2e-59 232.6 176 69.3
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 2.2e-59 232.6 176 69.3
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 2.9e-59 232.3 177 68.9
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 8.4e-59 230.7 176 68.2
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 1.1e-58 230.3 176 68.8
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 2.4e-58 229.2 173 66.5
BcaNung05287 Brassica carinata HOM05D001670 ORTHO05D002980 4.2e-58 228.4 176 67.6
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 4.2e-58 228.4 176 67.6
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 4.2e-58 228.4 176 67.6
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 7.1e-58 227.6 170 70.0
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 9.3e-58 227.3 184 66.8
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 2.1e-57 226.1 167 68.9
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 2.1e-57 226.1 167 68.9
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 6.0e-57 224.6 177 68.4
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 6.0e-57 224.6 170 68.8
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 1.3e-56 223.4 176 67.0
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 1.3e-56 223.4 175 65.1
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 2.3e-56 222.6 167 68.3
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 2.3e-56 222.6 167 68.3
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 6.6e-56 221.1 167 67.1
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 6.6e-56 221.1 167 67.7
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 6.6e-56 221.1 167 67.7
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 6.6e-56 221.1 167 67.7
A09p69250 Brassica napus HOM05D001670 ORTHO05D002980 8.7e-56 220.7 177 68.4
C08p54070 Brassica napus HOM05D001670 ORTHO05D002980 8.7e-56 220.7 177 68.4
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 8.7e-56 220.7 177 68.4
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 8.7e-56 220.7 177 68.4
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 1.9e-55 219.5 181 63.0
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 7.3e-55 217.6 152 66.4
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 6.2e-54 214.5 160 66.2
Thecc.03G154100 Theobroma cacao HOM05D001670 ORTHO05D002980 8.1e-54 214.2 152 69.1
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 1.1e-53 213.8 168 65.5
Glyma.03G118200 Glycine max HOM05D001670 ORTHO05D002980 4.6e-49 198.4 165 64.8
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 1.9e-47 193.0 176 60.8
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 4.0e-45 185.3 156 59.6
ECA234G0500 Erigeron canadensis HOM05D001670 ORTHO05D002980 6.4e-43 177.9 165 52.7
Cre14.g632950 Chlamydomonas reinhardtii HOM05D001670 ORTHO05D002980 1.1e-42 177.2 157 59.9
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 8.7e-40 167.5 150 56.7
C09p00060 Brassica napus HOM05D001670 ORTHO05D002980 2.5e-39 166.0 157 55.4
BraA09t35680Z Brassica rapa HOM05D001670 ORTHO05D002980 2.5e-39 166.0 157 55.4
MD07G1112800 Malus domestica HOM05D001670 ORTHO05D002980 1.3e-38 163.7 126 69.8
Pp3c6_26730 Physcomitrium patens HOM05D001670 ORTHO05D002980 9.0e-37 157.5 126 65.9
Lj5E710T0 Lonicera japonica HOM05D001670 ORTHO05D018202 1.0e-35 154.1 113 67.3
Lsat_1_v5_gn_4_44320 Lactuca sativa HOM05D001670 ORTHO05D002980 2.2e-35 152.9 126 62.7
Actinidia02758 Actinidia chinensis HOM05D001670 ORTHO05D018202 2.1e-33 146.4 84 84.5
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 1.3e-32 143.7 83 84.3
AagrBONN_evm.TU.Sc2ySwM_362.1757 Anthoceros agrestis HOM05D001670 ORTHO05D002980 2.8e-30 136.0 150 47.3
CSS0049488 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 3.8e-27 125.6 94 70.2
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 3.8e-27 125.6 92 69.6
Cfa026075 Carpinus fangiana HOM05D001670 ORTHO05D002980 1.3e-24 117.1 103 51.5
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 4.1e-13 79.0 80 55.0
MBI17_g09694_MAGBIO Magnolia biondii HOM05D000980 ORTHO05D000649 5.3e-13 78.6 92 46.7
SHI13575 Sapria himalayana HOM05D001670 ORTHO05D018202 3.8e-11 72.4 43 69.8
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 3.9e-08 62.4 30 93.3
Cc05_g01420 Coffea canephora HOM05D000334 ORTHO05D000200 1.5e-07 60.5 30 90.0
Cc04_g13500 Coffea canephora HOM05D001670 ORTHO05D018202 2.0e-07 60.1 30 90.0
Cc10_g13560 Coffea canephora HOM05D001670 ORTHO05D018202 2.0e-07 60.1 30 90.0
Cc00_g34020 Coffea canephora HOM05D001670 ORTHO05D018202 5.7e-07 58.5 30 86.7


User provided reference genes

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