Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G1931 Fragaria x ananassa HOM05D003639 ORTHO05D004246 7.8e-107 390.6 213 100.0
FAN03G0195 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.2e-104 380.9 213 98.1
FAN10G2664 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.2e-104 380.9 213 98.1
FAN14G5922 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.2e-104 380.9 213 97.7
FAN17G3014 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.1e-103 380.2 213 98.1
FAN27G3180 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.1e-103 380.2 213 97.2
FAN06G0994 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.4e-103 379.0 213 97.7
FAN19G1783 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.4e-103 379.0 213 97.7
FAN24G0290 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.9e-103 377.5 213 97.7
FAN01G0512 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.2e-102 376.7 213 96.2
FAN23G2202 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.2e-102 376.7 213 95.8
FAN07G1748 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.4e-102 375.2 213 96.7
FAN02G3905 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.7e-101 372.9 209 98.1
FAN22G1757 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.8e-101 371.7 213 96.2
FAN16G0989 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.6e-97 357.8 213 93.9
FAN09G4382 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.6e-96 356.3 204 97.1
FAN14G4828 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.8e-96 355.5 209 93.8
FvH4_6g24750 Fragaria vesca HOM05D003639 ORTHO05D004246 1.8e-95 352.8 209 93.3
FAN09G0054 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.8e-94 347.8 209 91.9
FAN25G1774 Fragaria x ananassa HOM05D003639 ORTHO05D004246 7.4e-89 330.9 213 88.3
FAN05G0107 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.3e-85 320.1 209 85.6
FAN13G2401 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.0e-82 310.5 169 97.6
FAN17G0086 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.0e-78 296.2 170 97.1
RcHm_v2.0_Chr3g0484331 Rosa chinensis HOM05D003639 ORTHO05D004246 1.5e-52 210.3 137 81.0
arahy.Tifrunner.gnm1.ann1.Y8CJQK Arachis hypogaea HOM05D003639 ORTHO05D004246 1.3e-48 197.2 178 64.6
arahy.Tifrunner.gnm1.ann1.6W6BYV Arachis hypogaea HOM05D003639 ORTHO05D004246 3.7e-48 195.7 178 64.0
CSS0048368 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 6.3e-48 194.9 193 60.6
Lj5g0008946 Lotus japonicus HOM05D003639 ORTHO05D004246 8.2e-48 194.5 180 62.8
Gohir.A12G015000 Gossypium hirsutum HOM05D003639 ORTHO05D004246 1.1e-47 194.1 177 65.5
Gorai.008G015500 Gossypium raimondii HOM05D003639 ORTHO05D004246 1.1e-47 194.1 177 65.5
Duzib248G1450 Durio zibethinus HOM05D003639 ORTHO05D004246 1.8e-47 193.4 178 64.0
Glyma.10G000800 Glycine max HOM05D003639 ORTHO05D004246 1.8e-47 193.4 179 62.6
Peaxi162Scf00130g00929 Petunia axillaris HOM05D003639 ORTHO05D004246 1.8e-47 193.4 189 60.8
Thecc.02G139000 Theobroma cacao HOM05D003639 ORTHO05D004246 3.1e-47 192.6 178 62.9
COL.COLO4_24957 Corchorus olitorius HOM05D003639 ORTHO05D004246 4.1e-47 192.2 178 64.6
Prupe.7G050300 Prunus persica HOM05D003639 ORTHO05D004246 4.1e-47 192.2 192 60.9
Gohir.D12G015400 Gossypium hirsutum HOM05D003639 ORTHO05D004246 1.2e-46 190.7 177 65.0
Actinidia39194 Actinidia chinensis HOM05D003639 ORTHO05D004246 1.6e-46 190.3 178 61.2
Eucgr.A02297 Eucalyptus grandis HOM05D003639 ORTHO05D004246 1.6e-46 190.3 180 60.6
Phvul.007G249600 Phaseolus vulgaris HOM05D003639 ORTHO05D004246 1.6e-46 190.3 179 60.9
Rhsim03G0032000 Rhododendron simsii HOM05D003639 ORTHO05D004246 2.0e-46 189.9 160 66.2
Hma1.2p1_2162F.1_g315680 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 2.7e-46 189.5 183 62.3
MSTRG.6401 Avicennia marina HOM05D003639 ORTHO05D004246 3.5e-46 189.1 190 60.0
VMungo0720G2842 Vigna mungo HOM05D003639 ORTHO05D004246 4.5e-46 188.7 179 61.5
Glyma.02G190600 Glycine max HOM05D003639 ORTHO05D004246 7.7e-46 188.0 179 60.9
Duzib132G0222 Durio zibethinus HOM05D003639 ORTHO05D004246 1.3e-45 187.2 178 63.5
PSO832G3057 Papaver somniferum HOM05D003639 ORTHO05D004246 1.3e-45 187.2 183 57.4
CAN.G1237.4 Capsicum annuum HOM05D003639 ORTHO05D004246 1.7e-45 186.8 180 59.4
Haze_19749 Corylus avellana HOM05D003639 ORTHO05D004246 1.7e-45 186.8 182 62.1
PSO063G3048 Papaver somniferum HOM05D003639 ORTHO05D004246 1.7e-45 186.8 162 63.0
PGSC0003DMG400012703 Solanum tuberosum HOM05D003639 ORTHO05D004246 2.2e-45 186.4 181 60.2
Nitab4.5_0000826g0140 Nicotiana tabacum HOM05D003639 ORTHO05D004246 2.9e-45 186.0 180 61.1
Nitab4.5_0001618g0260 Nicotiana tabacum HOM05D003639 ORTHO05D004246 2.9e-45 186.0 189 58.2
Solyc04g016510.3 Solanum lycopersicum HOM05D003639 ORTHO05D004246 2.9e-45 186.0 180 60.6
Sopen04g008580 Solanum pennellii HOM05D003639 ORTHO05D004246 6.5e-45 184.9 180 60.0
TAR369G0628 Trochodendron aralioides HOM05D003639 ORTHO05D004246 6.5e-45 184.9 183 61.2
Lj4C34T1 Lonicera japonica HOM05D003639 ORTHO05D004246 8.5e-45 184.5 184 59.8
Nn7g37752 Nelumbo nucifera HOM05D003639 ORTHO05D004246 1.5e-44 183.7 183 61.2
Atru.chr1.1191 Acer truncatum HOM05D003639 ORTHO05D004246 1.9e-44 183.3 187 59.9
CANSAT80G2101 Cannabis sativa HOM05D003639 ORTHO05D004246 2.5e-44 183.0 183 58.5
DCAR_014011 Daucus carota HOM05D003639 ORTHO05D004246 2.5e-44 183.0 180 60.0
SGA_v2.0_scaffold296G47577 Striga asiatica HOM05D003639 ORTHO05D004246 2.5e-44 183.0 191 59.2
CiPaw.09G042100 Carya illinoinensis HOM05D003639 ORTHO05D004246 4.2e-44 182.2 183 61.2
MD12G1086300 Malus domestica HOM05D003639 ORTHO05D004246 4.2e-44 182.2 195 59.0
PGR004G0521 Punica granatum HOM05D003639 ORTHO05D004246 5.5e-44 181.8 181 61.9
Aqoxy3G00063 Aquilegia oxysepala HOM05D003639 ORTHO05D004246 9.4e-44 181.0 166 63.9
Oeu023136.1 Olea europaea HOM05D003639 ORTHO05D004246 1.2e-43 180.6 189 57.1
SGA_v2.0_scaffold69G23129 Striga asiatica HOM05D003639 ORTHO05D004246 1.2e-43 180.6 192 55.2
Lalb_Chr21g0305241 Lupinus albus HOM05D003639 ORTHO05D004246 1.6e-43 180.3 181 60.2
Dinv30299 Davidia involucrata HOM05D003639 ORTHO05D004246 2.7e-43 179.5 183 59.6
Peaxi162Scf00177g10117 Petunia axillaris HOM05D003639 ORTHO05D004246 2.7e-43 179.5 172 61.0
Hund19126 Selenicereus undatus HOM05D003639 ORTHO05D004246 3.6e-43 179.1 180 58.3
TWI74G0834 Tripterygium wilfordii HOM05D003639 ORTHO05D004246 3.6e-43 179.1 181 59.1
QL07p005224 Quercus lobata HOM05D003639 ORTHO05D004246 8.0e-43 177.9 182 59.3
Ca_25791_v3 Cicer arietinum L. HOM05D003639 ORTHO05D004246 1.0e-42 177.6 178 57.3
SalBow6G0945 Salvia bowleyana HOM05D003639 ORTHO05D004246 1.4e-42 177.2 164 61.6
Cpa.g.sc120.6 Carica papaya HOM05D003639 ORTHO05D004246 3.0e-42 176.0 179 60.9
Ciclev10006458m.g Citrus clementina HOM05D003639 ORTHO05D004246 4.0e-42 175.6 177 58.8
Psat6g009840 Pisum sativum HOM05D003639 ORTHO05D004246 4.0e-42 175.6 190 56.3
EL10Ac3g07157 Beta vulgaris HOM05D003639 ORTHO05D004246 5.2e-42 175.3 180 58.3
CSS0037940 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 6.8e-42 174.9 193 56.5
Sp4g23770 Schrenkiella parvula HOM05D003639 ORTHO05D004246 1.2e-41 174.1 180 56.1
Ah.13g076790 Amaranthus hybridus HOM05D003639 ORTHO05D004246 1.5e-41 173.7 179 55.9
AUR62026120 Chenopodium quinoa HOM05D003639 ORTHO05D004246 1.5e-41 173.7 190 56.3
Manes.09G015900 Manihot esculenta HOM05D003639 ORTHO05D004246 2.0e-41 173.3 185 57.3
Medtr3g045130 Medicago truncatula HOM05D003639 ORTHO05D004246 2.6e-41 172.9 180 57.2
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 3.4e-41 172.6 178 57.3
Sc19g0008460 Simmondsia chinensis HOM05D003639 ORTHO05D004246 3.4e-41 172.6 182 57.1
TPR.G1512 Trifolium pratense HOM05D003639 ORTHO05D004246 4.4e-41 172.2 178 57.9
unitig_44.g31550 Utricularia gibba HOM05D003639 ORTHO05D004246 4.4e-41 172.2 188 55.9
Carub.0004s0611 Capsella rubella HOM05D003639 ORTHO05D004246 5.7e-41 171.8 177 58.2
Lsat_1_v5_gn_4_41600 Lactuca sativa HOM05D003639 ORTHO05D004246 5.7e-41 171.8 194 56.2
unitig_578.g16292 Utricularia gibba HOM05D003639 ORTHO05D004246 5.7e-41 171.8 194 55.7
CsaV3_6G036200 Cucumis sativus L. HOM05D003639 ORTHO05D004246 7.5e-41 171.4 184 57.6
C04p69090 Brassica napus HOM05D003639 ORTHO05D004246 9.8e-41 171.0 179 56.4
BolC4t28406H Brassica oleracea HOM05D003639 ORTHO05D004246 9.8e-41 171.0 179 56.4
CANSAT80G0359 Cannabis sativa HOM05D003639 ORTHO05D004246 1.3e-40 170.6 183 56.8
CARHR136620 Cardamine hirsuta HOM05D003639 ORTHO05D004246 1.3e-40 170.6 180 57.2
MELO3C026433.2 Cucumis melo HOM05D003639 ORTHO05D004246 1.3e-40 170.6 184 57.6
ClCG08G008940 Citrullus lanatus HOM05D003639 ORTHO05D004246 2.2e-40 169.9 184 57.1
A04p31660 Brassica napus HOM05D003639 ORTHO05D004246 2.8e-40 169.5 179 55.9
BraA04t18624Z Brassica rapa HOM05D003639 ORTHO05D004246 2.8e-40 169.5 179 55.9
Migut.J01707 Erythranthe guttata HOM05D003639 ORTHO05D004246 2.8e-40 169.5 192 52.6
THA.LOC104824426 Tarenaya hassleriana HOM05D003639 ORTHO05D004246 3.7e-40 169.1 178 57.9
AUR62024528 Chenopodium quinoa HOM05D003639 ORTHO05D004246 8.3e-40 167.9 180 56.7
TPR.G10246 Trifolium pratense HOM05D003639 ORTHO05D004246 1.4e-39 167.2 160 60.0
AT2G41500 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 3.1e-39 166.0 175 57.1
C04p02760 Brassica napus HOM05D003639 ORTHO05D004246 3.1e-39 166.0 170 56.5
Aa31LG1G23520 Aethionema arabicum HOM05D003639 ORTHO05D004246 4.1e-39 165.6 179 55.9
Thhalv10016457m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 7.0e-39 164.9 180 53.3
BolC4t21916H Brassica oleracea HOM05D003639 ORTHO05D004246 9.1e-39 164.5 170 55.9
Zm00001eb017050 Zea mays HOM05D003639 ORTHO05D004246 9.1e-39 164.5 159 56.0
A05p02320 Brassica napus HOM05D003639 ORTHO05D004246 1.2e-38 164.1 170 55.9
AL4G39590 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 1.6e-38 163.7 175 56.0
Thhalv10000860m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 2.0e-38 163.3 180 53.3
CDE04G0356 Ceratophyllum demersum HOM05D003639 ORTHO05D004246 3.5e-38 162.5 162 58.6
SEGI_17823 Sequoiadendron giganteum HOM05D003639 ORTHO05D004246 8.5e-37 157.9 197 51.8
BraA05t19227Z Brassica rapa HOM05D003639 ORTHO05D004246 1.5e-36 157.1 170 54.1
Medtr5g022690 Medicago truncatula HOM05D003639 ORTHO05D004246 2.5e-36 156.4 160 56.9
ATR0665G145 Amborella trichopoda HOM05D003639 ORTHO05D004246 7.2e-36 154.8 191 50.8
Sed0002463 Sechium edule HOM05D003639 ORTHO05D004246 2.7e-35 152.9 139 63.3
ECA234G2577 Erigeron canadensis HOM05D003639 ORTHO05D004246 4.7e-35 152.1 159 55.3
Hma1.2p1_0338F.1_g129500 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 6.8e-34 148.3 152 57.2
Hma1.2p1_1333F.1_g276240 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 8.8e-34 147.9 152 57.9
BcaNung06794 Brassica carinata HOM05D003639 ORTHO05D004246 2.0e-33 146.7 170 52.9
Os03g0355200 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 4.4e-33 145.6 158 51.9
Os03g0355400 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 4.4e-33 145.6 158 51.9
Potri.006G045800 Populus trichocarpa HOM05D003639 ORTHO05D004246 7.5e-33 144.8 184 51.1
Mapoly0061s0123 Marchantia polymorpha HOM05D003639 ORTHO05D004246 1.2e-30 137.5 200 45.5
HPP92_010210 Vanilla planifolia HOM05D000527 ORTHO05D000559 3.5e-30 136.0 158 57.6
BcaC02g12784 Brassica carinata HOM05D003639 ORTHO05D004246 1.3e-29 134.0 169 47.9
HPP92_010189 Vanilla planifolia HOM05D003639 ORTHO05D004246 2.3e-29 133.3 158 57.0
Pp3c9_11970 Physcomitrium patens HOM05D003639 ORTHO05D004246 3.8e-29 132.5 161 51.6
BolC5t34692H Brassica oleracea HOM05D003639 ORTHO05D004246 1.9e-28 130.2 152 53.3
CBR_g723 Chara braunii HOM05D003639 ORTHO05D004246 3.3e-28 129.4 155 52.9
Sabra06G0031300 Salix brachista HOM05D003639 ORTHO05D004246 4.3e-28 129.0 162 51.9
AagrBONN_evm.TU.Sc2ySwM_117.1154 Anthoceros agrestis HOM05D003639 ORTHO05D004246 1.7e-24 117.1 202 44.1
Medtr0012s0110 Medicago truncatula HOM05D003639 ORTHO05D004246 1.8e-23 113.6 127 58.3
SMO356G0612 Selaginella moellendorffii HOM05D003639 ORTHO05D004246 7.0e-23 111.7 178 41.0
Mapoly0014s0154 Marchantia polymorpha HOM05D003639 ORTHO05D004246 1.3e-21 107.5 163 44.8
Potri.016G042250 Populus trichocarpa HOM05D003639 ORTHO05D004246 1.5e-20 104.0 185 44.3
Atru.chr6.1378 Acer truncatum HOM05D003639 ORTHO05D004246 5.6e-20 102.1 102 60.8
MD14G1080500 Malus domestica HOM05D003639 ORTHO05D004246 1.9e-15 87.0 107 51.4
TAR065G0005 Trochodendron aralioides HOM05D003639 ORTHO05D004246 2.4e-15 86.7 96 53.1
vmacro21947 Vaccinium macrocarpon HOM05D003639 ORTHO05D004246 7.0e-15 85.1 163 42.3
Cc06_g18350 Coffea canephora HOM05D003639 ORTHO05D004246 1.2e-14 84.3 80 56.2
MCO12G002 Micromonas commoda HOM05D003639 ORTHO05D004246 1.3e-13 80.9 136 40.4
VMungo0540G1675 Vigna mungo HOM05D003639 ORTHO05D004246 3.0e-13 79.7 92 48.9
GSVIVG01033551001 Vitis vinifera HOM05D003639 ORTHO05D004246 1.1e-12 77.8 78 55.1
Psat4g106880 Pisum sativum HOM05D003639 ORTHO05D004246 1.6e-11 73.9 116 44.0
BcaNung04072 Brassica carinata HOM05D003639 ORTHO05D004246 4.7e-11 72.4 64 56.2
Atru.chr6.1379 Acer truncatum HOM05D003639 ORTHO05D004246 1.1e-10 71.2 58 62.1
MELO3C019777.2 Cucumis melo HOM05D003639 ORTHO05D004246 1.8e-10 70.5 77 58.4
BcaB06g29187 Brassica carinata HOM05D003639 ORTHO05D004246 4.0e-10 69.3 56 60.7
Psat6g118240 Pisum sativum HOM05D003639 ORTHO05D004246 2.0e-09 67.0 120 38.3
Sed0000547 Sechium edule HOM05D003639 ORTHO05D004246 2.0e-09 67.0 91 46.2
Cfa024100 Carpinus fangiana HOM05D003639 ORTHO05D004246 7.1e-07 58.5 118 39.8
QL04p089213 Quercus lobata HOM05D003639 ORTHO05D004246 7.1e-07 58.5 112 44.6


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