Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 4.5e-172 607.8 306 100.0
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 3.1e-133 478.8 286 87.4
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 9.1e-133 477.2 286 86.7
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.6e-132 476.5 286 87.1
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 1.2e-119 433.7 286 79.4
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 1.2e-103 380.6 274 71.5
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 3.2e-101 372.5 274 70.4
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 4.6e-92 342.0 277 65.7
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 3.0e-91 339.3 278 62.9
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.6e-89 333.6 278 62.2
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 1.1e-88 330.9 276 62.7
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.4e-87 325.9 278 63.7
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 2.2e-86 323.2 265 62.6
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 3.8e-86 322.4 287 60.3
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 6.4e-86 321.6 288 59.0
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 6.4e-86 321.6 288 59.0
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.1e-85 320.9 280 61.4
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 2.4e-85 319.7 281 62.3
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.2e-85 319.3 270 63.0
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 4.2e-85 318.9 280 59.6
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.6e-84 317.0 288 58.7
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 2.1e-84 316.6 290 59.0
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.3e-83 313.9 282 59.6
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 1.5e-82 310.5 291 57.4
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 1.3e-81 307.4 269 61.3
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 4.8e-81 305.4 277 58.1
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 6.2e-81 305.1 277 57.8
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 8.1e-81 304.7 282 58.5
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 8.1e-81 304.7 282 58.5
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.8e-80 303.5 287 56.1
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 1.8e-80 303.5 278 57.9
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 5.3e-80 302.0 287 55.7
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 9.0e-80 301.2 279 58.4
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 2.6e-79 299.7 280 57.1
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 5.8e-79 298.5 283 58.7
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 7.6e-79 298.1 286 56.6
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.3e-78 297.4 297 56.9
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 6.4e-78 295.0 250 61.2
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.1e-77 294.3 291 56.0
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 4.2e-77 292.4 245 62.4
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 4.2e-77 292.4 280 55.0
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 4.2e-77 292.4 370 47.6
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 5.4e-77 292.0 281 56.9
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 7.1e-77 291.6 273 57.9
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 7.1e-77 291.6 283 56.2
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 1.6e-76 290.4 287 56.1
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 1.6e-76 290.4 279 56.6
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 1.6e-76 290.4 280 54.3
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 2.1e-76 290.0 276 57.6
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 1.3e-75 287.3 280 55.4
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 3.0e-75 286.2 288 54.9
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 8.7e-75 284.6 281 56.6
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.5e-74 283.9 256 57.8
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 5.6e-74 282.0 252 59.1
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 7.4e-74 281.6 281 54.8
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 9.6e-74 281.2 274 55.1
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 9.6e-74 281.2 274 57.3
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 1.6e-73 280.4 252 59.5
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 1.4e-72 277.3 279 54.1
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 1.4e-72 277.3 279 54.1
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 4.0e-72 275.8 237 59.1
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 6.9e-72 275.0 279 55.2
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 1.2e-71 274.2 308 51.3
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 1.5e-71 273.9 258 58.5
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 2.6e-71 273.1 279 54.1
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 3.4e-71 272.7 265 57.4
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 4.5e-71 272.3 297 51.5
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 7.6e-71 271.6 250 56.4
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 7.6e-71 271.6 288 53.1
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 1.0e-70 271.2 279 53.8
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 1.3e-70 270.8 278 53.2
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 2.2e-70 270.0 279 54.5
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 6.4e-70 268.5 286 53.8
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 6.4e-70 268.5 290 52.8
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.1e-69 267.7 273 52.7
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 3.2e-69 266.2 274 54.4
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 7.1e-69 265.0 328 49.1
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 3.5e-68 262.7 277 51.3
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 7.9e-68 261.5 276 51.4
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 1.8e-67 260.4 291 50.9
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 5.1e-67 258.8 282 51.8
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 8.7e-67 258.1 283 50.5
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.5e-66 257.3 288 50.0
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 5.7e-66 255.4 277 50.9
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 8.2e-65 251.5 450 40.2
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 6.9e-64 248.4 296 48.6
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 5.8e-63 245.4 251 51.4
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 1.0e-62 244.6 281 50.5
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 4.9e-62 242.3 278 48.6
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 2.5e-61 240.0 297 48.8
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 9.3e-61 238.0 284 47.5
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 2.5e-58 229.9 279 47.0
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 2.5e-58 229.9 279 47.0
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 1.4e-56 224.2 299 45.5
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 1.8e-56 223.8 198 54.0
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 6.9e-56 221.9 273 45.8
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.2e-52 211.1 285 47.4
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 2.3e-51 206.8 240 49.6
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 5.0e-46 189.1 132 61.4
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 2.6e-42 176.8 182 51.6
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 1.7e-41 174.1 285 41.1
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 5.5e-37 159.1 234 37.2
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 7.0e-32 142.1 177 49.2
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 1.6e-31 141.0 287 35.5
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 8.5e-30 135.2 124 65.3
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 1.0e-27 128.3 89 64.0
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 1.8e-27 127.5 261 33.0
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 4.4e-26 122.9 94 59.6
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 7.0e-24 115.5 133 46.6
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 6.8e-19 99.0 131 40.5
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 1.7e-17 94.4 111 50.5
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 2.4e-16 90.5 257 29.2
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 2.0e-15 87.4 138 47.1
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 4.5e-15 86.3 125 48.0
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.7e-14 84.3 288 26.7
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.9e-13 80.9 157 35.7
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 3.3e-13 80.1 90 51.1
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 7.2e-13 79.0 211 31.3
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 3.4e-10 70.1 49 55.1
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 7.5e-10 68.9 89 48.3
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 7.8e-07 58.9 164 28.7
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 1.3e-06 58.2 46 52.2
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 2.3e-06 57.4 113 30.1


User provided reference genes

Program Settings