Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2063 Fragaria x ananassa HOM05D004146 ORTHO05D004843 1.6e-239 832.4 431 100.0
FvH4_1g26770 Fragaria vesca HOM05D004146 ORTHO05D004843 1.1e-235 819.7 431 98.4
FAN19G1384 Fragaria x ananassa HOM05D004146 ORTHO05D004843 2.1e-231 805.4 441 95.5
FAN28G1198 Fragaria x ananassa HOM05D004146 ORTHO05D004843 2.1e-231 805.4 444 95.0
RcHm_v2.0_Chr3g0486991 Rosa chinensis HOM05D004146 ORTHO05D004843 1.2e-223 779.6 434 94.2
MD01G1004200 Malus domestica HOM05D004146 ORTHO05D004843 1.2e-194 683.3 441 81.9
MD15G1342700 Malus domestica HOM05D004146 ORTHO05D004843 5.9e-186 654.4 448 79.2
CANSAT80G2876 Cannabis sativa HOM05D004146 ORTHO05D004843 1.6e-183 646.4 448 76.1
Thecc.01G319000 Theobroma cacao HOM05D004146 ORTHO05D004843 6.1e-183 644.4 454 76.9
Ciclev10020117m.g Citrus clementina HOM05D004146 ORTHO05D004843 8.0e-183 644.0 455 76.7
Dinv12116 Davidia involucrata HOM05D004146 ORTHO05D004843 3.0e-182 642.1 453 76.4
QL12p018794 Quercus lobata HOM05D004146 ORTHO05D004843 5.2e-182 641.3 453 76.4
Gohir.D08G141300 Gossypium hirsutum HOM05D004146 ORTHO05D004843 1.5e-181 639.8 455 75.4
Prupe.3G006800 Prunus persica HOM05D004146 ORTHO05D004843 2.0e-181 639.4 394 85.3
Eucgr.K03560 Eucalyptus grandis HOM05D004146 ORTHO05D004843 1.7e-180 636.3 451 74.5
Potri.014G117400 Populus trichocarpa HOM05D004146 ORTHO05D004843 3.7e-180 635.2 453 75.1
TWI14G0575 Tripterygium wilfordii HOM05D004146 ORTHO05D004843 3.7e-180 635.2 450 76.4
Gorai.004G145300 Gossypium raimondii HOM05D004146 ORTHO05D004843 6.3e-180 634.4 458 74.9
Atru.chr5.940 Acer truncatum HOM05D004146 ORTHO05D004843 8.2e-180 634.0 455 76.3
Cpa.g.sc18.100 Carica papaya HOM05D004146 ORTHO05D004843 8.2e-180 634.0 447 76.1
CiPaw.08G086700 Carya illinoinensis HOM05D004146 ORTHO05D004843 8.2e-180 634.0 454 76.2
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 1.8e-179 632.9 448 75.4
Manes.05G012300 Manihot esculenta HOM05D004146 ORTHO05D004843 2.4e-179 632.5 452 74.3
Gohir.A08G120400 Gossypium hirsutum HOM05D004146 ORTHO05D004843 3.1e-179 632.1 458 74.7
Sabra14G0087100 Salix brachista HOM05D004146 ORTHO05D004843 7.0e-179 630.9 461 74.2
CSS0021664 Camellia sinensis var. sinensis HOM05D004146 ORTHO05D004843 2.6e-178 629.0 446 75.3
TWI23G0480 Tripterygium wilfordii HOM05D004146 ORTHO05D004843 3.2e-176 622.1 453 74.6
CSS0047407 Camellia sinensis var. sinensis HOM05D004146 ORTHO05D004843 4.2e-176 621.7 446 74.2
CSS0038119 Camellia sinensis var. sinensis HOM05D004146 ORTHO05D004843 4.7e-175 618.2 454 73.8
Actinidia17925 Actinidia chinensis HOM05D004146 ORTHO05D004843 8.0e-175 617.5 454 74.2
Rhsim13G0002300 Rhododendron simsii HOM05D004146 ORTHO05D004843 3.0e-174 615.5 454 74.0
PGR083G0515 Punica granatum HOM05D004146 ORTHO05D004843 6.7e-174 614.4 448 73.7
GSVIVG01028167001 Vitis vinifera HOM05D004146 ORTHO05D004843 1.2e-173 613.6 452 73.2
EL10As5g23605 Beta vulgaris HOM05D004146 ORTHO05D004843 3.3e-173 612.1 440 75.2
AUR62024599 Chenopodium quinoa HOM05D004146 ORTHO05D004843 7.5e-173 610.9 438 73.1
Dinv39081 Davidia involucrata HOM05D004146 ORTHO05D004843 6.3e-172 607.8 489 69.1
CsaV3_7G030200 Cucumis sativus L. HOM05D004146 ORTHO05D004843 1.4e-171 606.7 446 73.5
MELO3C015904.2 Cucumis melo HOM05D004146 ORTHO05D004843 9.1e-171 604.0 446 73.1
Sopen01g030990 Solanum pennellii HOM05D004146 ORTHO05D004843 1.2e-170 603.6 452 72.1
vmacro02380 Vaccinium macrocarpon HOM05D004146 ORTHO05D004843 2.0e-170 602.8 460 72.8
arahy.Tifrunner.gnm1.ann1.E9GQEB Arachis hypogaea HOM05D004146 ORTHO05D004843 2.7e-170 602.4 445 72.1
arahy.Tifrunner.gnm1.ann1.BI9FA3 Arachis hypogaea HOM05D004146 ORTHO05D004843 1.3e-169 600.1 445 71.9
Nn2g12083 Nelumbo nucifera HOM05D004146 ORTHO05D004843 2.2e-169 599.4 453 71.5
Sc24g0004180 Simmondsia chinensis HOM05D004146 ORTHO05D004843 2.9e-169 599.0 444 72.3
PGSC0003DMG400009054 Solanum tuberosum HOM05D004146 ORTHO05D004843 5.0e-169 598.2 452 71.5
Glyma.19G218500 Glycine max HOM05D004146 ORTHO05D004843 6.5e-169 597.8 437 73.5
VMungo1383G2606 Vigna mungo HOM05D004146 ORTHO05D004843 2.5e-168 595.9 450 71.8
arahy.Tifrunner.gnm1.ann1.F4ZKGQ Arachis hypogaea HOM05D004146 ORTHO05D004843 3.2e-168 595.5 431 74.0
Phvul.001G214900 Phaseolus vulgaris HOM05D004146 ORTHO05D004843 4.2e-168 595.1 450 72.2
MSTRG.21711 Avicennia marina HOM05D004146 ORTHO05D004843 9.4e-168 594.0 452 69.5
Lalb_Chr18g0046551 Lupinus albus HOM05D004146 ORTHO05D004843 1.2e-167 593.6 437 72.3
arahy.Tifrunner.gnm1.ann1.TWIF5Z Arachis hypogaea HOM05D004146 ORTHO05D004843 4.7e-167 591.7 431 73.3
CAN.G293.4 Capsicum annuum HOM05D004146 ORTHO05D004843 6.1e-167 591.3 447 71.4
Duzib211G0108 Durio zibethinus HOM05D004146 ORTHO05D004843 1.4e-166 590.1 420 75.2
Duzib211G0650 Durio zibethinus HOM05D004146 ORTHO05D004843 2.3e-166 589.3 454 71.8
Lalb_Chr04g0260041 Lupinus albus HOM05D004146 ORTHO05D004843 2.3e-166 589.3 437 73.2
SGA_v2.0_scaffold376G50305 Striga asiatica HOM05D004146 ORTHO05D004843 4.0e-166 588.6 450 70.2
Cc01_g21680 Coffea canephora HOM05D004146 ORTHO05D004843 8.8e-166 587.4 463 68.3
Sed0005540 Sechium edule HOM05D004146 ORTHO05D004843 8.8e-166 587.4 447 71.6
Psat3g019080 Pisum sativum HOM05D004146 ORTHO05D004843 2.0e-165 586.3 441 71.7
Lj5g0012537 Lotus japonicus HOM05D004146 ORTHO05D004843 3.4e-165 585.5 452 70.4
TAR633G1592 Trochodendron aralioides HOM05D004146 ORTHO05D004843 3.4e-165 585.5 453 69.3
Medtr7g109870 Medicago truncatula HOM05D004146 ORTHO05D004843 1.7e-164 583.2 446 70.6
Migut.D00054 Erythranthe guttata HOM05D004146 ORTHO05D004843 1.4e-163 580.1 452 69.2
ECA236G0429 Erigeron canadensis HOM05D004146 ORTHO05D004843 1.8e-163 579.7 457 71.8
THA.LOC104802140 Tarenaya hassleriana HOM05D004146 ORTHO05D004843 2.4e-163 579.3 460 67.8
Aa31LG1G28520 Aethionema arabicum HOM05D004146 ORTHO05D004843 1.3e-161 573.5 445 68.1
Glyma.03G221500 Glycine max HOM05D004146 ORTHO05D004843 2.9e-161 572.4 452 70.1
Thhalv10001452m.g Eutrema salsugineum HOM05D004146 ORTHO05D004843 3.8e-161 572.0 440 68.6
TPR.G4037 Trifolium pratense HOM05D004146 ORTHO05D004843 6.6e-161 571.2 444 69.8
Lj1g0001654 Lotus japonicus HOM05D004146 ORTHO05D004843 5.5e-160 568.2 444 68.9
AL4G46770 Arabidopsis lyrata HOM05D004146 ORTHO05D004843 7.2e-160 567.8 445 68.3
C04p00700 Brassica napus HOM05D004146 ORTHO05D004843 1.2e-159 567.0 438 68.5
BolC4t21705H Brassica oleracea HOM05D004146 ORTHO05D004843 1.2e-159 567.0 438 68.5
ClCG09G004890 Citrullus lanatus HOM05D004146 ORTHO05D004843 1.2e-159 567.0 499 64.9
Peaxi162Scf00770g00128 Petunia axillaris HOM05D004146 ORTHO05D004843 1.2e-159 567.0 443 69.1
AT2G47210 Arabidopsis thaliana HOM05D004146 ORTHO05D004843 1.6e-159 566.6 445 68.1
BcaC02g12586 Brassica carinata HOM05D004146 ORTHO05D004843 2.8e-159 565.8 438 68.3
TPR.G38442 Trifolium pratense HOM05D004146 ORTHO05D004843 2.8e-159 565.8 439 70.4
CARHR142600 Cardamine hirsuta HOM05D004146 ORTHO05D004843 1.4e-158 563.5 448 66.7
BcaB02g08794 Brassica carinata HOM05D004146 ORTHO05D004843 6.8e-158 561.2 438 67.4
Ca_09227_v3 Cicer arietinum L. HOM05D004146 ORTHO05D004843 6.8e-158 561.2 469 67.6
BcaB06g29458 Brassica carinata HOM05D004146 ORTHO05D004843 1.2e-157 560.5 451 67.0
HPP92_024389 Vanilla planifolia HOM05D004146 ORTHO05D004843 2.6e-157 559.3 450 66.9
CDE10G1142 Ceratophyllum demersum HOM05D004146 ORTHO05D004843 9.8e-157 557.4 447 66.2
Sp4g29200 Schrenkiella parvula HOM05D004146 ORTHO05D004843 9.8e-157 557.4 447 65.8
Solyc01g079210.3 Solanum lycopersicum HOM05D004146 ORTHO05D004843 1.3e-156 557.0 426 70.9
HanXRQChr06g0168071 Helianthus annuus HOM05D004146 ORTHO05D004843 2.2e-156 556.2 430 71.9
PSO210G5259 Papaver somniferum HOM05D004146 ORTHO05D004843 2.2e-156 556.2 449 66.6
Lj1C336G0 Lonicera japonica HOM05D004146 ORTHO05D004843 1.1e-155 553.9 452 67.7
ATR0564G334 Amborella trichopoda HOM05D004146 ORTHO05D004843 2.4e-155 552.7 445 66.1
BraA05t19061Z Brassica rapa HOM05D004146 ORTHO05D004843 1.2e-154 550.4 468 63.9
Actinidia21373 Actinidia chinensis HOM05D004146 ORTHO05D004843 3.9e-153 545.4 437 69.8
C04p72630 Brassica napus HOM05D004146 ORTHO05D004843 3.9e-153 545.4 452 65.7
BraSC79t46677Z Brassica rapa HOM05D004146 ORTHO05D004843 6.6e-153 544.7 444 66.2
PSO761G0652 Papaver somniferum HOM05D004146 ORTHO05D004843 6.6e-153 544.7 453 65.3
BcaC02g06965 Brassica carinata HOM05D004146 ORTHO05D004843 1.1e-152 543.9 452 65.5
Carub.0004s2995 Capsella rubella HOM05D004146 ORTHO05D004843 1.1e-152 543.9 445 65.8
Lalb_Chr06g0167021 Lupinus albus HOM05D004146 ORTHO05D004843 1.9e-152 543.1 451 66.3
Nitab4.5_0000222g0120 Nicotiana tabacum HOM05D004146 ORTHO05D004843 1.9e-152 543.1 413 70.9
TAR362G0580 Trochodendron aralioides HOM05D004146 ORTHO05D004843 1.0e-150 537.3 421 69.6
Os05g0540800 Oryza sativa ssp. japonica HOM05D004146 ORTHO05D004843 2.3e-150 536.2 443 66.1
Lsat_1_v5_gn_0_33621 Lactuca sativa HOM05D004146 ORTHO05D004843 6.8e-150 534.6 463 66.5
Aqoxy2G00845 Aquilegia oxysepala HOM05D004146 ORTHO05D004843 8.9e-150 534.3 453 65.6
Carub.0004s2994 Capsella rubella HOM05D004146 ORTHO05D004843 7.5e-149 531.2 445 64.5
A04p34860 Brassica napus HOM05D004146 ORTHO05D004843 1.3e-148 530.4 470 62.6
Zm00001eb235700 Zea mays HOM05D004146 ORTHO05D004843 1.9e-147 526.6 447 65.3
unitig_736.g22928 Utricularia gibba HOM05D004146 ORTHO05D004843 1.6e-146 523.5 452 64.6
Hma1.2p1_0965F.1_g242130 Hydrangea macrophylla HOM05D004146 ORTHO05D004843 7.5e-141 504.6 449 65.7
Aqoxy4G02480 Aquilegia oxysepala HOM05D004146 ORTHO05D004843 9.8e-141 504.2 455 62.9
MBI19_g36749_MAGBIO Magnolia biondii HOM05D004146 ORTHO05D004843 8.3e-140 501.1 449 65.3
A05p00620 Brassica napus HOM05D004146 ORTHO05D004843 1.1e-136 490.7 363 69.4
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 5.6e-136 488.4 417 64.7
Medtr1g086590 Medicago truncatula HOM05D004146 ORTHO05D004843 6.8e-134 481.5 425 63.5
DCAR_018267 Daucus carota HOM05D004146 ORTHO05D004843 7.8e-130 468.0 403 63.5
Nitab4.5_0010752g0020 Nicotiana tabacum HOM05D004146 ORTHO05D004843 7.8e-130 468.0 368 68.5
Hund09662 Selenicereus undatus HOM05D004146 ORTHO05D004843 2.3e-129 466.5 408 64.2
Haze_05083 Corylus avellana HOM05D004146 ORTHO05D004843 2.4e-123 446.4 482 57.9
Ca_10265_v3 Cicer arietinum L. HOM05D004146 ORTHO05D004843 7.1e-123 444.9 507 53.3
SEGI_29063 Sequoiadendron giganteum HOM05D004146 ORTHO05D004843 1.3e-121 440.7 471 54.1
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 6.2e-119 431.8 419 59.9
Duzib138G1200 Durio zibethinus HOM05D004146 ORTHO05D004843 1.2e-117 427.6 454 56.6
Oeu044739.1 Olea europaea HOM05D004146 ORTHO05D004843 3.4e-117 426.0 396 59.6
Lj1A14G70 Lonicera japonica HOM05D004146 ORTHO05D004843 1.4e-115 420.6 332 67.8
Mapoly0165s0024 Marchantia polymorpha HOM05D004146 ORTHO05D004843 7.1e-115 418.3 474 50.4
CiPaw.07G120600 Carya illinoinensis HOM05D004146 ORTHO05D004843 1.6e-114 417.2 339 68.7
AagrBONN_evm.TU.Sc2ySwM_228.1245 Anthoceros agrestis HOM05D004146 ORTHO05D004843 1.6e-111 407.1 501 47.3
SMO244G0096 Selaginella moellendorffii HOM05D004146 ORTHO05D004843 1.1e-107 394.4 432 52.8
Pp3c1_35180 Physcomitrium patens HOM05D004146 ORTHO05D004843 4.5e-101 372.5 492 45.5
BcaC02g09008 Brassica carinata HOM05D004146 ORTHO05D004843 1.0e-100 371.3 457 50.5
SHI33153 Sapria himalayana HOM05D004146 ORTHO05D004843 6.2e-95 352.1 254 69.7
Psat6g160560 Pisum sativum HOM05D004146 ORTHO05D004843 2.9e-92 343.2 367 54.5
BolC4t25516H Brassica oleracea HOM05D004146 ORTHO05D004843 1.5e-88 330.9 336 55.7
Dinv33143 Davidia involucrata HOM05D004146 ORTHO05D004843 7.9e-82 308.5 480 44.6
CBR_g3593 Chara braunii HOM05D004146 ORTHO05D004843 1.4e-81 307.8 552 38.0
Psat6g160640 Pisum sativum HOM05D004146 ORTHO05D004843 3.8e-76 289.7 355 51.8
Pp3c2_4040 Physcomitrium patens HOM05D004146 ORTHO05D004843 6.5e-76 288.9 368 46.2
Mapoly0092s0082 Marchantia polymorpha HOM05D004146 ORTHO05D004843 7.9e-74 282.0 517 38.3
BolC4t25515H Brassica oleracea HOM05D004146 ORTHO05D004843 1.8e-57 227.6 173 67.1
PRCOL_00004506 Prasinoderma coloniale HOM05D004146 ORTHO05D004843 3.0e-57 226.9 384 38.0
BolC4t28751H Brassica oleracea HOM05D004146 ORTHO05D004843 1.2e-56 224.9 251 56.6
C04p39500 Brassica napus HOM05D004146 ORTHO05D004843 3.7e-55 219.9 177 63.3
C04p39490 Brassica napus HOM05D004146 ORTHO05D004843 1.2e-53 214.9 178 62.9
SalBow3G0988 Salvia bowleyana HOM05D004146 ORTHO05D004843 1.1e-51 208.4 128 79.7
BcaC02g09009 Brassica carinata HOM05D004146 ORTHO05D004843 7.2e-51 205.7 171 62.6
Lj1g0004326 Lotus japonicus HOM05D004146 ORTHO05D004843 3.4e-48 196.8 253 50.2
AagrBONN_evm.TU.Sc2ySwM_228.1331 Anthoceros agrestis HOM05D004146 ORTHO05D004843 1.6e-45 188.0 377 36.1
Cre03.g144907 Chlamydomonas reinhardtii HOM05D004146 ORTHO05D004843 3.8e-44 183.3 262 41.2
Actinidia20972 Actinidia chinensis HOM05D004146 ORTHO05D004843 1.2e-42 178.3 225 50.2
Psat6g160680 Pisum sativum HOM05D004146 ORTHO05D004843 6.2e-34 149.4 108 63.0
MCO05G453 Micromonas commoda HOM05D004146 ORTHO05D004843 8.9e-33 145.6 352 34.1
Lj1A14G71 Lonicera japonica HOM05D004146 ORTHO05D004843 2.7e-29 134.0 134 60.4
Oeu062253.1 Olea europaea HOM05D004146 ORTHO05D004843 2.3e-28 131.0 140 48.6
TPR.G18531 Trifolium pratense HOM05D004146 ORTHO05D004843 4.3e-27 126.7 90 65.6
BcaC02g12616 Brassica carinata HOM05D004146 ORTHO05D004843 4.4e-24 116.7 171 44.4
Lsat_1_v5_gn_8_147141 Lactuca sativa HOM05D004146 ORTHO05D004843 7.5e-24 115.9 133 57.9
Lsat_1_v5_gn_2_7680 Lactuca sativa HOM05D004146 ORTHO05D004843 2.9e-23 114.0 149 52.3
Lsat_1_v5_gn_3_136441 Lactuca sativa HOM05D004146 ORTHO05D004843 6.4e-23 112.8 138 55.1
GSVIVG01028163001 Vitis vinifera HOM05D004146 ORTHO05D004843 4.3e-19 100.1 82 68.3
RcHm_v2.0_Chr2g0114941 Rosa chinensis HOM05D004146 ORTHO05D004843 2.1e-18 97.8 99 53.5
CAN.G111.15 Capsicum annuum HOM05D004146 ORTHO05D004843 3.1e-17 94.0 57 70.2
Cfa022451 Carpinus fangiana HOM05D004146 ORTHO05D004843 5.2e-17 93.2 308 26.0
Sabra02G0047100 Salix brachista HOM05D004503 ORTHO05D005460 2.6e-16 90.9 169 45.6
HPP92_024388 Vanilla planifolia HOM05D002498 ORTHO05D008129 1.2e-13 82.0 64 68.8
BolC4t28750H Brassica oleracea HOM05D004146 ORTHO05D004843 1.7e-12 78.2 199 35.2
RcHm_v2.0_Chr6g0284911 Rosa chinensis HOM05D004215 ORTHO05D005293 7.3e-11 72.8 109 39.4
C04p39510 Brassica napus HOM05D004146 ORTHO05D004843 1.2e-10 72.0 119 42.9
Lsat_1_v5_gn_4_71221 Lactuca sativa HOM05D002292 ORTHO05D003256 5.8e-08 63.2 42 81.0
VMungo1383G1227 Vigna mungo HOM05D004146 ORTHO05D000001 2.2e-07 61.2 39 74.4
CSS0026841 Camellia sinensis var. sinensis HOM05D004146 ORTHO05D004843 3.2e-06 57.4 32 84.4


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