Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.1e-250 869.4 421 100.0
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 3.2e-245 851.3 421 98.6
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 3.5e-244 847.8 421 97.9
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 7.9e-244 846.7 421 97.6
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 5.7e-242 840.5 419 97.1
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 1.1e-224 783.1 420 90.0
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 3.0e-219 765.0 420 88.8
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.0e-214 750.0 422 85.5
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 1.9e-213 745.7 422 84.1
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 6.7e-211 737.3 429 83.2
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 4.0e-203 711.4 424 80.0
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 1.5e-202 709.5 419 81.1
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 2.8e-201 705.3 424 78.8
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 4.8e-201 704.5 424 79.0
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 4.8e-201 704.5 413 80.6
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 8.3e-201 703.7 422 79.9
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 8.3e-201 703.7 423 80.4
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 2.4e-200 702.2 416 80.3
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 3.5e-199 698.4 415 80.0
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 5.9e-199 697.6 422 79.9
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 5.9e-199 697.6 413 80.4
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 5.9e-199 697.6 413 80.4
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 1.0e-198 696.8 416 80.8
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 1.3e-198 696.4 422 78.4
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 6.5e-198 694.1 416 80.5
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 1.9e-197 692.6 417 80.8
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 4.2e-197 691.4 418 79.7
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 5.5e-197 691.0 421 80.3
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 2.1e-196 689.1 415 79.3
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 2.1e-196 689.1 423 79.4
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 2.1e-196 689.1 420 79.3
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 2.8e-196 688.7 426 78.2
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 2.8e-196 688.7 424 78.1
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 6.1e-196 687.6 415 79.3
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 6.1e-196 687.6 425 77.6
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 8.0e-196 687.2 421 80.3
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 2.3e-195 685.6 422 77.7
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 3.0e-195 685.3 417 79.6
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 3.0e-195 685.3 424 78.3
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 4.0e-195 684.9 416 79.3
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 8.8e-195 683.7 416 79.1
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 1.2e-194 683.3 422 80.8
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 3.4e-194 681.8 409 80.2
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 3.4e-194 681.8 416 78.1
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 5.7e-194 681.0 410 79.8
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 9.8e-194 680.2 416 79.1
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 1.7e-193 679.5 413 79.4
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 1.1e-192 676.8 395 81.3
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 1.4e-192 676.4 421 76.7
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 9.2e-192 673.7 420 78.1
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 1.6e-191 672.9 415 77.1
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 1.6e-191 672.9 415 77.1
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 2.0e-191 672.5 406 78.1
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 3.5e-191 671.8 422 78.4
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 5.9e-191 671.0 410 78.3
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 7.8e-191 670.6 415 77.3
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 1.0e-190 670.2 415 76.9
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 1.3e-190 669.8 411 79.1
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 6.6e-190 667.5 425 77.2
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 6.6e-190 667.5 388 81.7
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 1.1e-189 666.8 417 76.7
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 4.3e-189 664.8 415 76.9
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 4.3e-189 664.8 415 78.6
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 7.3e-189 664.1 415 76.4
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 7.3e-189 664.1 415 76.4
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 1.6e-188 662.9 415 76.4
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 1.6e-188 662.9 415 76.4
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 3.6e-188 661.8 411 78.1
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 8.0e-188 660.6 415 76.1
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 3.0e-187 658.7 395 79.7
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 5.2e-187 657.9 410 77.6
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 6.8e-187 657.5 413 76.0
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 8.9e-187 657.1 411 75.9
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 1.2e-186 656.8 412 77.7
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 1.3e-185 653.3 415 75.2
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 1.7e-185 652.9 391 79.0
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 1.7e-185 652.9 391 79.5
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 2.4e-184 649.0 410 76.6
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 7.0e-184 647.5 437 72.3
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 1.2e-183 646.7 411 75.7
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 1.3e-182 643.3 422 73.7
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 8.6e-182 640.6 390 78.5
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 4.6e-175 618.2 410 73.9
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 3.0e-174 615.5 391 74.2
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 8.6e-174 614.0 424 69.8
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.1e-171 607.1 376 79.8
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 6.8e-171 604.4 372 80.1
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 2.0e-170 602.8 349 82.8
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 1.3e-169 600.1 407 68.8
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 4.9e-169 598.2 359 81.3
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 3.5e-167 592.0 371 77.6
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 1.3e-166 590.1 345 80.9
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.9e-165 586.3 352 79.5
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.9e-165 586.3 350 79.7
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 2.1e-156 556.2 333 79.6
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 2.4e-155 552.7 394 64.5
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 1.2e-154 550.4 324 78.7
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 4.4e-154 548.5 317 80.4
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 1.7e-153 546.6 339 77.9
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 1.7e-153 546.6 322 77.3
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 1.9e-152 543.1 316 79.1
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 2.7e-151 539.3 411 60.6
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 6.9e-147 524.6 406 67.0
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 2.4e-144 516.2 403 59.3
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 2.7e-143 512.7 396 58.3
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 1.3e-142 510.4 317 74.1
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 2.6e-138 496.1 276 84.4
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 2.1e-127 459.9 292 76.7
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 1.1e-125 454.1 266 80.1
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 1.7e-108 397.1 424 46.7
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 5.5e-104 382.1 274 62.4
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 5.7e-101 372.1 310 62.3
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 8.2e-100 368.2 243 75.7
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 1.1e-99 367.9 231 74.9
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 1.8e-94 350.5 423 43.3
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.8e-83 313.9 200 75.5
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 6.6e-81 305.4 389 41.1
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 2.4e-67 260.4 358 39.1
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 3.2e-67 260.0 430 35.3
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 5.1e-57 226.1 317 42.6
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 9.6e-32 142.1 80 77.5
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 3.3e-24 117.1 74 73.0
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 3.1e-22 110.5 89 67.4
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 9.0e-22 109.0 93 63.4
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 2.5e-16 90.9 139 38.8
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 3.7e-15 87.0 52 69.2
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 4.0e-14 83.6 41 97.6
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 5.8e-13 79.7 88 51.1
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 7.1e-11 72.8 56 66.1
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 7.4e-08 62.8 88 43.2


User provided reference genes

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