Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G3014 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.6e-106 387.5 213 100.0
FAN03G0195 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.6e-105 383.6 213 99.1
FAN10G2664 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.6e-105 383.6 213 99.1
FAN14G5922 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.6e-105 383.6 213 98.6
FAN06G0994 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.6e-104 381.7 213 98.6
FAN19G1783 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.6e-104 381.7 213 98.6
FAN24G0290 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.1e-103 380.2 213 98.6
FAN01G0512 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.8e-103 379.4 213 97.2
FAN23G2202 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.8e-103 379.4 213 96.7
FAN28G1931 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.8e-103 379.4 213 98.1
FAN07G1748 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.3e-103 377.9 213 97.7
FAN02G3905 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.0e-102 375.9 209 99.0
FAN22G1757 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.8e-102 374.4 213 97.2
FAN27G3180 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.8e-102 374.4 213 97.2
FAN09G4382 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.9e-97 359.4 204 98.0
FAN16G0989 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.3e-97 358.6 213 94.4
FAN14G4828 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.6e-97 357.1 209 94.3
FvH4_6g24750 Fragaria vesca HOM05D003639 ORTHO05D004246 6.2e-96 354.4 209 93.8
FAN09G0054 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.5e-94 349.7 209 92.3
FAN25G1774 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.7e-90 334.3 213 89.2
FAN05G0107 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.9e-87 324.3 209 86.6
FAN13G2401 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.6e-83 311.6 169 98.2
FAN17G0086 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.4e-79 299.3 170 98.2
RcHm_v2.0_Chr3g0484331 Rosa chinensis HOM05D003639 ORTHO05D004246 1.1e-52 210.7 137 81.0
arahy.Tifrunner.gnm1.ann1.Y8CJQK Arachis hypogaea HOM05D003639 ORTHO05D004246 1.1e-49 200.7 178 66.3
arahy.Tifrunner.gnm1.ann1.6W6BYV Arachis hypogaea HOM05D003639 ORTHO05D004246 3.3e-49 199.1 178 65.7
Lj5g0008946 Lotus japonicus HOM05D003639 ORTHO05D004246 4.4e-49 198.7 180 64.4
CSS0048368 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 5.7e-49 198.4 193 62.2
Gohir.A12G015000 Gossypium hirsutum HOM05D003639 ORTHO05D004246 3.7e-48 195.7 177 66.1
Gorai.008G015500 Gossypium raimondii HOM05D003639 ORTHO05D004246 3.7e-48 195.7 177 66.1
Peaxi162Scf00130g00929 Petunia axillaris HOM05D003639 ORTHO05D004246 3.7e-48 195.7 189 61.9
Prupe.7G050300 Prunus persica HOM05D003639 ORTHO05D004246 3.7e-48 195.7 192 61.5
Actinidia39194 Actinidia chinensis HOM05D003639 ORTHO05D004246 4.8e-48 195.3 178 62.9
Duzib248G1450 Durio zibethinus HOM05D003639 ORTHO05D004246 6.3e-48 194.9 178 64.6
Glyma.10G000800 Glycine max HOM05D003639 ORTHO05D004246 6.3e-48 194.9 179 63.1
COL.COLO4_24957 Corchorus olitorius HOM05D003639 ORTHO05D004246 1.1e-47 194.1 178 65.2
Eucgr.A02297 Eucalyptus grandis HOM05D003639 ORTHO05D004246 1.1e-47 194.1 180 62.2
Phvul.007G249600 Phaseolus vulgaris HOM05D003639 ORTHO05D004246 1.1e-47 194.1 179 62.6
Thecc.02G139000 Theobroma cacao HOM05D003639 ORTHO05D004246 1.1e-47 194.1 178 63.5
Rhsim03G0032000 Rhododendron simsii HOM05D003639 ORTHO05D004246 1.8e-47 193.4 160 67.5
Gohir.D12G015400 Gossypium hirsutum HOM05D003639 ORTHO05D004246 4.1e-47 192.2 177 65.5
VMungo0720G2842 Vigna mungo HOM05D003639 ORTHO05D004246 4.1e-47 192.2 179 63.1
MSTRG.6401 Avicennia marina HOM05D003639 ORTHO05D004246 7.0e-47 191.4 190 61.1
PSO832G3057 Papaver somniferum HOM05D003639 ORTHO05D004246 1.2e-46 190.7 183 59.0
CAN.G1237.4 Capsicum annuum HOM05D003639 ORTHO05D004246 1.6e-46 190.3 180 61.1
Duzib132G0222 Durio zibethinus HOM05D003639 ORTHO05D004246 1.6e-46 190.3 178 62.9
Hma1.2p1_2162F.1_g315680 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 1.6e-46 190.3 183 62.8
Glyma.02G190600 Glycine max HOM05D003639 ORTHO05D004246 2.7e-46 189.5 179 61.5
Nitab4.5_0001618g0260 Nicotiana tabacum HOM05D003639 ORTHO05D004246 2.7e-46 189.5 189 59.3
TAR369G0628 Trochodendron aralioides HOM05D003639 ORTHO05D004246 3.5e-46 189.1 183 62.8
Nitab4.5_0000826g0140 Nicotiana tabacum HOM05D003639 ORTHO05D004246 4.5e-46 188.7 179 60.3
Haze_19749 Corylus avellana HOM05D003639 ORTHO05D004246 5.9e-46 188.3 182 62.6
PGSC0003DMG400012703 Solanum tuberosum HOM05D003639 ORTHO05D004246 5.9e-46 188.3 180 61.7
Solyc04g016510.3 Solanum lycopersicum HOM05D003639 ORTHO05D004246 1.0e-45 187.6 180 61.7
PSO063G3048 Papaver somniferum HOM05D003639 ORTHO05D004246 2.2e-45 186.4 162 63.6
Sopen04g008580 Solanum pennellii HOM05D003639 ORTHO05D004246 2.2e-45 186.4 180 61.1
SGA_v2.0_scaffold296G47577 Striga asiatica HOM05D003639 ORTHO05D004246 2.2e-45 186.4 191 60.2
Lj4C34T1 Lonicera japonica HOM05D003639 ORTHO05D004246 5.0e-45 185.3 184 60.3
Nn7g37752 Nelumbo nucifera HOM05D003639 ORTHO05D004246 5.0e-45 185.3 195 60.0
Atru.chr1.1191 Acer truncatum HOM05D003639 ORTHO05D004246 6.5e-45 184.9 187 60.4
CANSAT80G2101 Cannabis sativa HOM05D003639 ORTHO05D004246 6.5e-45 184.9 183 59.6
Lalb_Chr21g0305241 Lupinus albus HOM05D003639 ORTHO05D004246 6.5e-45 184.9 181 62.4
MD12G1086300 Malus domestica HOM05D003639 ORTHO05D004246 8.5e-45 184.5 195 59.0
Aqoxy3G00063 Aquilegia oxysepala HOM05D003639 ORTHO05D004246 1.1e-44 184.1 165 65.5
SGA_v2.0_scaffold69G23129 Striga asiatica HOM05D003639 ORTHO05D004246 1.5e-44 183.7 192 56.2
Oeu023136.1 Olea europaea HOM05D003639 ORTHO05D004246 2.5e-44 183.0 189 58.2
PGR004G0521 Punica granatum HOM05D003639 ORTHO05D004246 2.5e-44 183.0 181 62.4
CiPaw.09G042100 Carya illinoinensis HOM05D003639 ORTHO05D004246 4.2e-44 182.2 183 61.2
Ca_25791_v3 Cicer arietinum L. HOM05D003639 ORTHO05D004246 5.5e-44 181.8 178 59.0
DCAR_014011 Daucus carota HOM05D003639 ORTHO05D004246 5.5e-44 181.8 180 59.4
TWI74G0834 Tripterygium wilfordii HOM05D003639 ORTHO05D004246 1.2e-43 180.6 181 59.7
Dinv30299 Davidia involucrata HOM05D003639 ORTHO05D004246 1.6e-43 180.3 183 60.1
SalBow6G0945 Salvia bowleyana HOM05D003639 ORTHO05D004246 1.6e-43 180.3 162 63.6
Hund19126 Selenicereus undatus HOM05D003639 ORTHO05D004246 2.1e-43 179.9 180 58.9
QL07p005224 Quercus lobata HOM05D003639 ORTHO05D004246 2.7e-43 179.5 182 59.9
Psat6g009840 Pisum sativum HOM05D003639 ORTHO05D004246 3.6e-43 179.1 190 57.9
CSS0037940 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 6.1e-43 178.3 193 58.0
Medtr3g045130 Medicago truncatula HOM05D003639 ORTHO05D004246 8.0e-43 177.9 180 58.9
Peaxi162Scf00177g10117 Petunia axillaris HOM05D003639 ORTHO05D004246 8.0e-43 177.9 172 60.5
Cpa.g.sc120.6 Carica papaya HOM05D003639 ORTHO05D004246 1.4e-42 177.2 179 60.3
Ciclev10006458m.g Citrus clementina HOM05D003639 ORTHO05D004246 1.4e-42 177.2 177 59.3
Manes.09G015900 Manihot esculenta HOM05D003639 ORTHO05D004246 1.8e-42 176.8 185 58.9
TPR.G1512 Trifolium pratense HOM05D003639 ORTHO05D004246 2.3e-42 176.4 178 59.6
unitig_578.g16292 Utricularia gibba HOM05D003639 ORTHO05D004246 2.3e-42 176.4 194 57.2
EL10Ac3g07157 Beta vulgaris HOM05D003639 ORTHO05D004246 3.0e-42 176.0 180 58.9
Sp4g23770 Schrenkiella parvula HOM05D003639 ORTHO05D004246 4.0e-42 175.6 180 56.7
C04p69090 Brassica napus HOM05D003639 ORTHO05D004246 5.2e-42 175.3 180 58.3
BolC4t28406H Brassica oleracea HOM05D003639 ORTHO05D004246 5.2e-42 175.3 180 58.3
unitig_44.g31550 Utricularia gibba HOM05D003639 ORTHO05D004246 6.8e-42 174.9 189 58.2
Ah.13g076790 Amaranthus hybridus HOM05D003639 ORTHO05D004246 8.8e-42 174.5 179 56.4
A04p31660 Brassica napus HOM05D003639 ORTHO05D004246 1.5e-41 173.7 180 57.8
BraA04t18624Z Brassica rapa HOM05D003639 ORTHO05D004246 1.5e-41 173.7 180 57.8
Carub.0004s0611 Capsella rubella HOM05D003639 ORTHO05D004246 1.5e-41 173.7 177 58.8
Lsat_1_v5_gn_4_41600 Lactuca sativa HOM05D003639 ORTHO05D004246 1.5e-41 173.7 194 56.7
AUR62026120 Chenopodium quinoa HOM05D003639 ORTHO05D004246 2.0e-41 173.3 190 55.8
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 2.0e-41 173.3 187 56.1
CANSAT80G0359 Cannabis sativa HOM05D003639 ORTHO05D004246 2.6e-41 172.9 183 57.9
Sc19g0008460 Simmondsia chinensis HOM05D003639 ORTHO05D004246 3.4e-41 172.6 182 56.6
CARHR136620 Cardamine hirsuta HOM05D003639 ORTHO05D004246 9.8e-41 171.0 180 57.2
CsaV3_6G036200 Cucumis sativus L. HOM05D003639 ORTHO05D004246 1.3e-40 170.6 184 57.1
Migut.J01707 Erythranthe guttata HOM05D003639 ORTHO05D004246 1.3e-40 170.6 192 53.1
TPR.G10246 Trifolium pratense HOM05D003639 ORTHO05D004246 1.3e-40 170.6 160 61.2
AUR62024528 Chenopodium quinoa HOM05D003639 ORTHO05D004246 1.7e-40 170.2 180 57.2
THA.LOC104824426 Tarenaya hassleriana HOM05D003639 ORTHO05D004246 1.7e-40 170.2 181 58.0
MELO3C026433.2 Cucumis melo HOM05D003639 ORTHO05D004246 2.2e-40 169.9 184 57.1
ClCG08G008940 Citrullus lanatus HOM05D003639 ORTHO05D004246 3.7e-40 169.1 184 56.5
AT2G41500 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 8.3e-40 167.9 175 57.7
Zm00001eb017050 Zea mays HOM05D003639 ORTHO05D004246 8.3e-40 167.9 159 57.2
Aa31LG1G23520 Aethionema arabicum HOM05D003639 ORTHO05D004246 1.1e-39 167.5 179 56.4
C04p02760 Brassica napus HOM05D003639 ORTHO05D004246 1.8e-39 166.8 161 59.0
Thhalv10016457m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 2.4e-39 166.4 180 53.9
CDE04G0356 Ceratophyllum demersum HOM05D003639 ORTHO05D004246 3.1e-39 166.0 162 59.9
AL4G39590 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 4.1e-39 165.6 175 56.6
BolC4t21916H Brassica oleracea HOM05D003639 ORTHO05D004246 5.4e-39 165.2 161 58.4
Thhalv10000860m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 5.4e-39 165.2 180 53.9
A05p02320 Brassica napus HOM05D003639 ORTHO05D004246 7.0e-39 164.9 161 58.4
Medtr5g022690 Medicago truncatula HOM05D003639 ORTHO05D004246 2.2e-37 159.8 160 58.1
BraA05t19227Z Brassica rapa HOM05D003639 ORTHO05D004246 8.5e-37 157.9 161 56.5
ATR0665G145 Amborella trichopoda HOM05D003639 ORTHO05D004246 1.9e-36 156.8 190 51.1
SEGI_17823 Sequoiadendron giganteum HOM05D003639 ORTHO05D004246 1.9e-36 156.8 197 51.3
Sed0002463 Sechium edule HOM05D003639 ORTHO05D004246 2.1e-35 153.3 139 63.3
ECA234G2577 Erigeron canadensis HOM05D003639 ORTHO05D004246 2.7e-35 152.9 159 55.3
Hma1.2p1_0338F.1_g129500 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 5.2e-34 148.7 152 57.2
Hma1.2p1_1333F.1_g276240 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 6.8e-34 148.3 152 57.9
BcaNung06794 Brassica carinata HOM05D003639 ORTHO05D004246 1.2e-33 147.5 161 55.3
Os03g0355200 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 2.6e-33 146.4 158 51.9
Os03g0355400 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 2.6e-33 146.4 158 51.9
Potri.006G045800 Populus trichocarpa HOM05D003639 ORTHO05D004246 3.4e-33 146.0 182 52.2
Mapoly0061s0123 Marchantia polymorpha HOM05D003639 ORTHO05D004246 2.4e-31 139.8 200 47.0
BcaC02g12784 Brassica carinata HOM05D003639 ORTHO05D004246 3.5e-30 136.0 160 51.9
HPP92_010210 Vanilla planifolia HOM05D000527 ORTHO05D000559 3.5e-30 136.0 158 57.6
Pp3c9_11970 Physcomitrium patens HOM05D003639 ORTHO05D004246 1.7e-29 133.7 161 52.2
HPP92_010189 Vanilla planifolia HOM05D003639 ORTHO05D004246 2.3e-29 133.3 158 57.0
BolC5t34692H Brassica oleracea HOM05D003639 ORTHO05D004246 1.1e-28 131.0 143 55.9
CBR_g723 Chara braunii HOM05D003639 ORTHO05D004246 1.5e-28 130.6 172 50.6
Sabra06G0031300 Salix brachista HOM05D003639 ORTHO05D004246 1.9e-28 130.2 160 53.1
AagrBONN_evm.TU.Sc2ySwM_117.1154 Anthoceros agrestis HOM05D003639 ORTHO05D004246 4.4e-25 119.0 202 43.6
Medtr0012s0110 Medicago truncatula HOM05D003639 ORTHO05D004246 7.5e-25 118.2 117 60.7
SMO356G0612 Selaginella moellendorffii HOM05D003639 ORTHO05D004246 7.0e-23 111.7 178 41.0
Mapoly0014s0154 Marchantia polymorpha HOM05D003639 ORTHO05D004246 1.7e-21 107.1 163 44.8
Atru.chr6.1378 Acer truncatum HOM05D003639 ORTHO05D004246 8.6e-21 104.8 102 62.7
Potri.016G042250 Populus trichocarpa HOM05D003639 ORTHO05D004246 8.6e-21 104.8 185 44.9
TAR065G0005 Trochodendron aralioides HOM05D003639 ORTHO05D004246 6.4e-16 88.6 96 54.2
vmacro21947 Vaccinium macrocarpon HOM05D003639 ORTHO05D004246 8.3e-16 88.2 163 43.6
Cc06_g18350 Coffea canephora HOM05D003639 ORTHO05D004246 3.2e-15 86.3 80 57.5
MD14G1080500 Malus domestica HOM05D003639 ORTHO05D004246 5.4e-15 85.5 107 50.5
MCO12G002 Micromonas commoda HOM05D003639 ORTHO05D004246 6.0e-14 82.0 136 41.2
VMungo0540G1675 Vigna mungo HOM05D003639 ORTHO05D004246 1.0e-13 81.3 92 50.0
GSVIVG01033551001 Vitis vinifera HOM05D003639 ORTHO05D004246 2.5e-12 76.6 78 53.8
Psat4g106880 Pisum sativum HOM05D003639 ORTHO05D004246 4.3e-12 75.9 116 44.8
BcaNung04072 Brassica carinata HOM05D003639 ORTHO05D004246 4.7e-11 72.4 64 56.2
Atru.chr6.1379 Acer truncatum HOM05D003639 ORTHO05D004246 1.1e-10 71.2 58 62.1
MELO3C019777.2 Cucumis melo HOM05D003639 ORTHO05D004246 1.1e-10 71.2 77 58.4
BcaB06g29187 Brassica carinata HOM05D003639 ORTHO05D004246 4.0e-10 69.3 56 60.7
Psat6g118240 Pisum sativum HOM05D003639 ORTHO05D004246 8.9e-10 68.2 120 40.8
Sed0000547 Sechium edule HOM05D003639 ORTHO05D004246 3.4e-09 66.2 91 45.1
Cfa024100 Carpinus fangiana HOM05D003639 ORTHO05D004246 2.4e-07 60.1 118 40.7
QL04p089213 Quercus lobata HOM05D003639 ORTHO05D004246 9.2e-07 58.2 112 43.8


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