Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2448 Fragaria x ananassa HOM05D005655 ORTHO05D007386 2.5e-118 428.7 206 100.0
FvH4_2g12780 Fragaria vesca HOM05D005655 ORTHO05D007386 3.6e-117 424.9 206 98.5
RcHm_v2.0_Chr6g0273621 Rosa chinensis HOM05D005655 ORTHO05D007386 2.4e-108 395.6 209 92.3
Prupe.8G045000 Prunus persica HOM05D005655 ORTHO05D007386 3.4e-99 365.2 198 86.9
CiPaw.15G011200 Carya illinoinensis HOM05D005655 ORTHO05D007386 1.1e-84 317.0 199 75.9
GSVIVG01013676001 Vitis vinifera HOM05D005655 ORTHO05D007386 2.9e-82 308.9 202 73.3
CANSAT25G2324 Cannabis sativa HOM05D005655 ORTHO05D007386 2.5e-81 305.8 204 71.6
Ciclev10001190m.g Citrus clementina HOM05D005655 ORTHO05D007386 9.3e-81 303.9 198 72.7
Potri.002G061650 Populus trichocarpa HOM05D005655 ORTHO05D007386 6.0e-80 301.2 197 75.1
Dinv41018 Davidia involucrata HOM05D005655 ORTHO05D007386 1.0e-79 300.4 196 75.0
Duzib093G0465 Durio zibethinus HOM05D005655 ORTHO05D007386 5.1e-79 298.1 198 71.7
Lj5g0012902 Lotus japonicus HOM05D005655 ORTHO05D007386 5.1e-79 298.1 199 70.9
Sabra02G0049900 Salix brachista HOM05D005655 ORTHO05D007386 7.4e-78 294.3 203 71.9
Manes.02G186000 Manihot esculenta HOM05D005655 ORTHO05D007386 2.1e-77 292.7 209 70.3
Atru.chr13.1965 Acer truncatum HOM05D005655 ORTHO05D007386 4.8e-77 291.6 185 74.1
Gorai.005G076300 Gossypium raimondii HOM05D005655 ORTHO05D007386 4.8e-77 291.6 198 71.7
QL02p036335 Quercus lobata HOM05D005655 ORTHO05D007386 4.8e-77 291.6 237 62.9
Gohir.D02G067400 Gossypium hirsutum HOM05D005655 ORTHO05D007386 8.2e-77 290.8 198 71.2
MSTRG.22119 Avicennia marina HOM05D005655 ORTHO05D007386 1.1e-76 290.4 195 73.3
SGA_v2.0_scaffold371G50147 Striga asiatica HOM05D005655 ORTHO05D007386 1.1e-76 290.4 198 71.7
TWI74G0660 Tripterygium wilfordii HOM05D005655 ORTHO05D007386 1.4e-76 290.0 199 70.4
Phvul.007G085300 Phaseolus vulgaris HOM05D005655 ORTHO05D007386 1.8e-76 289.7 197 70.6
CSS0031675 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 1.2e-75 287.0 197 72.1
Eucgr.F02671 Eucalyptus grandis HOM05D005655 ORTHO05D007386 1.2e-75 287.0 201 69.2
Hma1.2p1_0358F.1_g134910 Hydrangea macrophylla HOM05D005655 ORTHO05D007386 1.3e-74 283.5 201 69.7
CSS0015534 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 1.7e-74 283.1 197 71.6
Migut.N02937 Erythranthe guttata HOM05D005655 ORTHO05D007386 2.2e-74 282.7 199 71.4
Cc10_g06370 Coffea canephora HOM05D005655 ORTHO05D007386 2.9e-74 282.3 197 69.0
vmacro21200 Vaccinium macrocarpon HOM05D005655 ORTHO05D007386 2.9e-74 282.3 185 73.0
Haze_17834 Corylus avellana HOM05D005655 ORTHO05D007386 6.5e-74 281.2 185 74.1
Haze_17840 Corylus avellana HOM05D005655 ORTHO05D007386 6.5e-74 281.2 185 73.5
arahy.Tifrunner.gnm1.ann1.A75B0U Arachis hypogaea HOM05D005655 ORTHO05D007386 1.1e-73 280.4 198 66.2
SalBow6G4612 Salvia bowleyana HOM05D005655 ORTHO05D007386 3.2e-73 278.9 195 68.7
Sed0016594 Sechium edule HOM05D005655 ORTHO05D007386 4.2e-73 278.5 197 67.5
TAR625G0054 Trochodendron aralioides HOM05D005655 ORTHO05D007386 7.2e-73 277.7 199 68.8
COL.COLO4_13720 Corchorus olitorius HOM05D005655 ORTHO05D007386 1.2e-72 276.9 185 70.8
Rhsim06G0093900 Rhododendron simsii HOM05D005655 ORTHO05D007386 1.2e-72 276.9 187 72.7
Cfa018255 Carpinus fangiana HOM05D005655 ORTHO05D007386 1.6e-72 276.6 185 73.0
Cpa.g.sc26.127 Carica papaya HOM05D005655 ORTHO05D007386 2.7e-72 275.8 205 67.3
Nn5g28881 Nelumbo nucifera HOM05D005655 ORTHO05D007386 2.7e-72 275.8 198 66.7
Lj7C387T6 Lonicera japonica HOM05D005655 ORTHO05D007386 4.6e-72 275.0 185 71.9
TPR.G23158 Trifolium pratense HOM05D005655 ORTHO05D007386 1.8e-71 273.1 199 65.8
arahy.Tifrunner.gnm1.ann1.3U6NKV Arachis hypogaea HOM05D005655 ORTHO05D007386 3.0e-71 272.3 214 61.2
ClCG08G007170 Citrullus lanatus HOM05D005655 ORTHO05D007386 3.9e-71 271.9 185 70.3
CAN.G564.32 Capsicum annuum HOM05D005655 ORTHO05D007386 5.1e-71 271.6 196 68.4
MELO3C019957.2 Cucumis melo HOM05D005655 ORTHO05D007386 8.7e-71 270.8 188 70.7
ECA247G4107 Erigeron canadensis HOM05D005655 ORTHO05D007386 1.9e-70 269.6 195 69.2
Solyc04g072140.4 Solanum lycopersicum HOM05D005655 ORTHO05D007386 2.5e-70 269.2 196 67.9
HanXRQChr04g0115611 Helianthus annuus HOM05D005655 ORTHO05D007386 4.3e-70 268.5 195 69.7
PGR042G2919 Punica granatum HOM05D005655 ORTHO05D007386 5.7e-70 268.1 185 68.6
Peaxi162Scf00226g00219 Petunia axillaris HOM05D005655 ORTHO05D007386 2.2e-69 266.2 196 68.4
PGSC0003DMG400031154 Solanum tuberosum HOM05D005655 ORTHO05D007386 2.2e-69 266.2 195 68.2
Sopen04g028310 Solanum pennellii HOM05D005655 ORTHO05D007386 2.8e-69 265.8 196 67.9
CsaV3_6G004840 Cucumis sativus L. HOM05D005655 ORTHO05D007386 3.7e-69 265.4 185 70.8
Ca_10644_v3 Cicer arietinum L. HOM05D005655 ORTHO05D007386 4.8e-69 265.0 188 67.6
Aqoxy5G02015 Aquilegia oxysepala HOM05D005655 ORTHO05D007386 6.3e-69 264.6 199 64.3
THA.LOC104816107 Tarenaya hassleriana HOM05D005655 ORTHO05D007386 2.0e-67 259.6 200 63.5
VMungo0720G1747 Vigna mungo HOM05D005655 ORTHO05D007386 3.4e-67 258.8 242 57.9
Nitab4.5_0000433g0050 Nicotiana tabacum HOM05D005655 ORTHO05D007386 1.0e-66 257.3 188 67.6
PSO170G2558 Papaver somniferum HOM05D005655 ORTHO05D007386 2.9e-66 255.8 199 65.3
Thhalv10007608m.g Eutrema salsugineum HOM05D005655 ORTHO05D007386 8.5e-66 254.2 205 60.0
Carub.0001s3222 Capsella rubella HOM05D005655 ORTHO05D007386 1.1e-65 253.8 208 59.1
PSO210G7095 Papaver somniferum HOM05D005655 ORTHO05D007386 1.4e-65 253.4 202 63.4
Hund26667 Selenicereus undatus HOM05D005655 ORTHO05D007386 2.5e-65 252.7 198 62.6
BcaC08g43808 Brassica carinata HOM05D005655 ORTHO05D007386 7.2e-65 251.1 198 60.1
AL1G48650 Arabidopsis lyrata HOM05D005655 ORTHO05D007386 9.4e-65 250.8 208 58.2
Nitab4.5_0001000g0130 Nicotiana tabacum HOM05D005655 ORTHO05D007386 9.4e-65 250.8 188 67.0
BcaB07g33038 Brassica carinata HOM05D005655 ORTHO05D007386 1.2e-64 250.4 198 59.6
AT1G34150 Arabidopsis thaliana HOM05D005655 ORTHO05D007386 2.1e-64 249.6 202 58.9
Lsat_1_v5_gn_1_5920 Lactuca sativa HOM05D005655 ORTHO05D007386 4.6e-64 248.4 185 65.9
Sp1g29390 Schrenkiella parvula HOM05D005655 ORTHO05D007386 6.1e-64 248.1 205 58.5
EL10Ac1g01637 Beta vulgaris HOM05D005655 ORTHO05D007386 3.3e-62 242.3 198 60.6
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 1.1e-60 237.3 199 60.3
Glyma.10G220000 Glycine max HOM05D005655 ORTHO05D007386 1.4e-60 236.9 157 68.2
AUR62022311 Chenopodium quinoa HOM05D005655 ORTHO05D007386 1.8e-60 236.5 187 61.5
Glyma.20G171700 Glycine max HOM05D005655 ORTHO05D007386 1.8e-60 236.5 157 68.8
Os03g0381100 Oryza sativa ssp. japonica HOM05D005655 ORTHO05D007386 2.4e-60 236.1 199 60.3
DCAR_013167 Daucus carota HOM05D005655 ORTHO05D007386 3.1e-60 235.7 154 68.8
MBI05_g00396_MAGBIO Magnolia biondii HOM05D001233 ORTHO05D001233 5.3e-60 235.0 234 54.7
C06p11890 Brassica napus HOM05D005655 ORTHO05D000003 2.0e-59 233.0 185 58.9
BolC6t36321H Brassica oleracea HOM05D005655 ORTHO05D000003 2.0e-59 233.0 185 58.9
Psat6g189760 Pisum sativum HOM05D005655 ORTHO05D007386 2.6e-59 232.6 156 68.6
A09p32350 Brassica napus HOM05D005655 ORTHO05D000003 3.4e-59 232.3 185 58.9
Zm00001eb018490 Zea mays HOM05D005655 ORTHO05D007386 5.9e-59 231.5 198 59.1
Lalb_Chr02g0141651 Lupinus albus HOM05D005655 ORTHO05D007386 3.8e-58 228.8 161 69.6
Medtr1g097390 Medicago truncatula HOM05D005655 ORTHO05D007386 1.4e-57 226.9 154 68.8
Gohir.A02G061800 Gossypium hirsutum HOM05D005655 ORTHO05D007386 2.5e-57 226.1 147 72.8
Ah.02g115760 Amaranthus hybridus HOM05D005655 ORTHO05D007386 9.4e-57 224.2 194 58.2
FAN24G0542 Fragaria x ananassa HOM05D005655 ORTHO05D007386 2.8e-53 212.6 115 89.6
SHI09123 Sapria himalayana HOM05D005655 ORTHO05D007386 2.0e-51 206.5 185 58.4
Thecc.10G182000 Theobroma cacao HOM05D005655 ORTHO05D007386 7.7e-51 204.5 123 75.6
Aa31LG6G8320 Aethionema arabicum HOM05D005655 ORTHO05D000003 2.5e-49 199.5 164 59.1
ATR0564G440 Amborella trichopoda HOM05D005655 ORTHO05D007386 2.1e-48 196.4 123 73.2
Mapoly0139s0011 Marchantia polymorpha HOM05D005655 ORTHO05D007386 4.7e-48 195.3 195 49.7
Pp3c9_3740 Physcomitrium patens HOM05D005655 ORTHO05D007386 1.2e-46 190.7 202 47.0
Lsat_1_v5_gn_1_5940 Lactuca sativa HOM05D005655 ORTHO05D007386 1.5e-46 190.3 123 70.7
Sc13g0008190 Simmondsia chinensis HOM05D005655 ORTHO05D007386 1.3e-45 187.2 122 75.4
AagrBONN_evm.TU.Sc2ySwM_368.1575 Anthoceros agrestis HOM05D005655 ORTHO05D007386 3.5e-43 179.1 200 44.5
AUR62034929 Chenopodium quinoa HOM05D005655 ORTHO05D007386 3.5e-43 179.1 123 64.2
CBR_g31748 Chara braunii HOM05D005655 ORTHO05D007386 5.9e-43 178.3 199 45.7
Actinidia17754 Actinidia chinensis HOM05D005655 ORTHO05D007386 1.0e-42 177.6 132 72.0
MD05G1036800 Malus domestica HOM05D005655 ORTHO05D007386 2.1e-40 169.9 83 90.4
SMO174G0185 Selaginella moellendorffii HOM05D005655 ORTHO05D007386 1.4e-39 167.2 128 58.6
Cre02.g086050 Chlamydomonas reinhardtii HOM05D005655 ORTHO05D007386 3.0e-39 166.0 209 42.6
MD05G1036900 Malus domestica HOM05D005655 ORTHO05D007386 1.2e-38 164.1 98 80.6
Glyma.20G171733 Glycine max HOM05D005655 ORTHO05D007386 1.7e-37 160.2 115 70.4
Eucgr.J00222 Eucalyptus grandis HOM05D005655 ORTHO05D007386 1.1e-33 147.5 83 74.7
Eucgr.L00427 Eucalyptus grandis HOM05D005655 ORTHO05D007386 3.3e-33 146.0 83 73.5
arahy.Tifrunner.gnm1.ann1.15WA1E Arachis hypogaea HOM05D005655 ORTHO05D007386 9.5e-33 144.4 174 44.3
unitig_21.g20593 Utricularia gibba HOM05D005655 ORTHO05D007386 1.6e-32 143.7 150 54.0
Eucgr.I00104 Eucalyptus grandis HOM05D005655 ORTHO05D007386 2.8e-29 132.9 80 71.2
MCO10G057 Micromonas commoda HOM05D005655 ORTHO05D007386 1.8e-28 130.2 128 50.0
PRCOL_00002466 Prasinoderma coloniale HOM05D005655 ORTHO05D007386 1.3e-26 124.0 254 35.0
HPP92_027831 Vanilla planifolia HOM05D005655 ORTHO05D007386 1.5e-25 120.6 87 62.1
Eucgr.F00074 Eucalyptus grandis HOM05D005655 ORTHO05D007386 1.4e-23 114.0 62 75.8
Cfa024548 Carpinus fangiana HOM05D005655 ORTHO05D007386 3.5e-19 99.4 136 40.4
SEGI_11089 Sequoiadendron giganteum HOM05D005655 ORTHO05D007386 3.0e-18 96.3 115 47.8
Hma1.2p1_0358F.1_g134900 Hydrangea macrophylla HOM05D005655 ORTHO05D007386 2.1e-16 90.1 56 67.9
unitig_21.g20592 Utricularia gibba HOM05D005655 ORTHO05D007386 1.4e-15 87.4 50 74.0
arahy.Tifrunner.gnm1.ann1.29RT0M Arachis hypogaea HOM05D005655 ORTHO05D007386 2.3e-15 86.7 114 39.5
Lalb_Chr02g0141641 Lupinus albus HOM05D005655 ORTHO05D007386 5.8e-14 82.0 43 83.7
Actinidia17755 Actinidia chinensis HOM05D005655 ORTHO05D007386 1.3e-13 80.9 48 70.8
CARHR033670 Cardamine hirsuta HOM05D005655 ORTHO05D007386 6.0e-11 72.0 43 67.4
arahy.Tifrunner.gnm1.ann1.N6M4TT Arachis hypogaea HOM05D001194 ORTHO05D005909 2.3e-10 70.1 49 59.2
HPP92_016851 Vanilla planifolia HOM05D005655 ORTHO05D007386 1.6e-08 63.9 38 71.1
Peaxi162Scf00226g00318 Petunia axillaris HOM05D003028 ORTHO05D003465 3.6e-08 62.8 39 71.8
TPR.G7160 Trifolium pratense HOM05D005655 ORTHO05D007386 4.0e-07 59.3 33 75.8
CSS0037344 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 2.6e-06 56.6 141 31.9


User provided reference genes

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