Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 9.1e-151 537.0 285 100.0
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 2.7e-139 498.8 302 90.4
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.4e-137 491.5 302 88.7
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.1e-135 486.9 290 91.0
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 1.2e-113 413.7 303 77.9
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 5.4e-103 378.3 301 71.4
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 3.0e-101 372.5 301 70.4
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 1.1e-100 370.5 313 69.6
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 7.8e-94 347.8 302 65.9
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 5.0e-93 345.1 303 64.7
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 8.1e-91 337.8 302 65.2
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 5.2e-90 335.1 302 65.2
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 1.7e-85 320.1 304 61.8
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 4.3e-84 315.5 301 60.8
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 7.3e-84 314.7 304 60.5
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.2e-83 313.9 301 61.1
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.6e-83 313.5 302 59.9
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 2.1e-83 313.2 302 60.3
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 6.8e-82 308.1 302 58.6
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 7.6e-81 304.7 305 60.7
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 1.3e-80 303.9 302 60.6
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 6.4e-80 301.6 303 58.7
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 2.4e-79 299.7 305 59.3
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 1.2e-78 297.4 300 59.0
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 2.7e-78 296.2 308 59.4
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 7.8e-78 294.7 305 56.7
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 1.3e-77 293.9 302 58.6
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 3.0e-77 292.7 300 58.0
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 3.3e-76 289.3 300 58.3
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 9.6e-76 287.7 304 58.6
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 2.8e-75 286.2 301 58.8
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 3.6e-75 285.8 300 57.3
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 3.1e-74 282.7 306 56.5
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 4.0e-74 282.3 305 56.4
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 1.2e-73 280.8 305 56.1
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 2.6e-73 279.6 305 54.4
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 3.4e-73 279.3 305 54.4
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 4.4e-73 278.9 300 57.7
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 9.9e-73 277.7 299 55.2
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 9.9e-73 277.7 382 49.0
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 1.7e-72 276.9 305 56.4
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 1.2e-70 270.8 303 57.4
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 2.1e-70 270.0 305 54.8
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 2.7e-70 269.6 398 47.2
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 4.6e-70 268.9 298 55.0
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 3.0e-69 266.2 304 53.9
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 5.1e-69 265.4 301 56.1
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 8.7e-69 264.6 301 55.1
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 1.9e-68 263.5 304 51.6
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 2.1e-67 260.0 311 52.7
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 2.8e-67 259.6 301 55.8
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 6.2e-67 258.5 188 72.9
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 8.1e-67 258.1 311 53.4
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 1.1e-66 257.7 304 54.3
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 1.1e-66 257.7 188 71.8
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 1.4e-66 257.3 301 53.5
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 3.1e-66 256.1 311 52.4
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 5.3e-66 255.4 305 53.1
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 5.3e-66 255.4 296 53.0
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 4.5e-65 252.3 293 52.9
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 8.4e-64 248.1 301 54.5
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 2.4e-63 246.5 301 51.8
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 3.2e-63 246.1 303 52.8
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 5.4e-63 245.4 304 50.7
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 5.4e-63 245.4 304 53.3
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 1.6e-62 243.8 302 54.0
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 3.5e-62 242.7 304 52.6
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 1.8e-61 240.4 301 49.5
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 5.1e-61 238.8 224 60.3
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 5.1e-61 238.8 302 51.3
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 1.1e-60 237.7 304 49.3
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 1.9e-60 236.9 304 50.3
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 3.3e-60 236.1 300 50.7
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 3.7e-59 232.6 299 49.2
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 8.1e-59 231.5 300 50.3
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 1.4e-58 230.7 300 50.0
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 9.0e-58 228.0 304 50.3
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 1.7e-56 223.8 266 50.0
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 5.5e-55 218.8 266 49.6
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 5.5e-55 218.8 266 49.2
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 6.0e-54 215.3 266 49.6
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 7.9e-54 214.9 272 48.2
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 1.3e-53 214.2 268 48.5
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 1.8e-53 213.8 311 48.9
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 8.7e-53 211.5 283 47.0
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 1.9e-52 210.3 301 48.2
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 1.9e-52 210.3 268 48.9
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 4.8e-51 205.7 302 47.4
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 6.2e-51 205.3 267 47.9
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 6.2e-51 205.3 265 48.3
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 8.2e-51 204.9 298 47.0
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 1.8e-50 203.8 267 47.6
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 5.3e-50 202.2 267 47.6
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 6.9e-50 201.8 267 47.9
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 1.5e-49 200.7 267 47.6
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 3.8e-48 196.1 240 48.8
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.4e-47 194.1 306 45.1
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 5.5e-47 192.2 231 51.5
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 1.6e-46 190.7 297 44.4
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 1.6e-43 180.6 257 46.7
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 1.1e-42 177.9 229 48.9
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 6.9e-42 175.3 300 44.0
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 5.0e-40 169.1 303 40.9
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.8e-37 160.6 303 40.3
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 1.7e-35 154.1 279 39.8
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 6.1e-30 135.6 312 34.3
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 1.0e-24 118.2 292 32.5
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 3.9e-21 106.3 75 76.0
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 1.4e-18 97.8 267 34.1
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 3.8e-16 89.7 276 31.2
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 5.5e-15 85.9 289 29.1
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 2.7e-14 83.6 287 30.3
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 3.6e-14 83.2 136 41.2
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 3.4e-12 76.6 67 58.2
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 1.4e-10 71.2 285 26.7
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 5.3e-10 69.3 243 25.9
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 8.0e-06 55.5 75 40.0


User provided reference genes

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