Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 1.8e-230 802.7 565 100.0
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 1.5e-173 613.6 579 78.1
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 1.1e-163 580.9 592 75.5
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 4.6e-154 548.9 553 60.8
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 6.8e-142 508.4 548 73.2
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 2.9e-116 423.3 448 57.6
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 1.6e-111 407.5 529 59.7
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 1.8e-110 404.1 565 55.0
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 1.1e-107 394.8 581 62.5
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 9.3e-107 391.7 568 53.7
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 1.5e-101 374.4 578 53.8
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 2.9e-100 370.2 517 54.9
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 1.2e-98 364.8 507 62.5
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 2.3e-97 360.5 474 71.5
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 3.9e-97 359.8 516 64.3
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 3.3e-96 356.7 528 59.1
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 5.7e-96 355.9 479 53.9
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 1.8e-94 350.9 484 67.1
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 2.4e-94 350.5 469 60.3
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 1.3e-92 344.7 504 55.0
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 1.7e-92 344.4 491 61.3
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 1.7e-92 344.4 511 53.6
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 6.5e-92 342.4 502 48.8
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 1.4e-91 341.3 511 53.4
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 9.4e-91 338.6 537 64.4
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 1.6e-90 337.8 469 55.0
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 2.1e-90 337.4 576 60.6
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 5.1e-89 332.8 573 49.4
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 6.7e-89 332.4 579 55.6
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 2.6e-88 330.5 496 60.3
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 1.3e-87 328.2 542 61.6
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 8.2e-87 325.5 447 56.4
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 2.4e-86 323.9 580 53.8
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 3.1e-86 323.6 467 52.7
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 5.9e-85 319.3 580 49.8
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 5.5e-83 312.8 468 67.1
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 2.7e-82 310.5 580 50.0
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 5.2e-81 306.2 469 61.2
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 5.2e-81 306.2 483 54.2
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 1.7e-79 301.2 566 56.9
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 1.7e-79 301.2 581 52.8
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 8.2e-79 298.9 468 57.7
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 1.8e-78 297.7 563 51.3
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 1.6e-77 294.7 579 57.0
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 5.0e-76 289.7 516 48.3
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 6.5e-76 289.3 564 56.9
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 6.5e-76 289.3 513 55.0
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 8.5e-76 288.9 562 55.9
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 3.2e-75 287.0 521 49.1
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 1.2e-74 285.0 544 42.6
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 1.6e-74 284.6 578 48.8
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 2.7e-74 283.9 469 59.7
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 4.7e-74 283.1 580 51.6
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 6.1e-74 282.7 605 41.3
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 1.0e-73 282.0 505 55.6
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 1.8e-73 281.2 532 48.7
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 1.2e-72 278.5 549 45.7
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 1.2e-72 278.5 494 59.3
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 3.3e-72 276.9 529 53.1
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 7.5e-72 275.8 514 54.1
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 6.3e-71 272.7 470 47.4
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 1.6e-69 268.1 513 53.8
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 7.7e-69 265.8 568 52.1
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 1.7e-68 264.6 476 45.0
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 5.0e-68 263.1 502 51.4
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 9.4e-67 258.8 479 46.6
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 3.6e-66 256.9 390 48.5
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 1.4e-65 255.0 555 41.4
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 2.3e-65 254.2 488 59.6
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 6.8e-65 252.7 516 51.9
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 3.4e-64 250.4 646 37.0
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 2.2e-63 247.7 512 52.3
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 2.2e-63 247.7 517 47.2
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 3.7e-63 246.9 562 48.4
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 1.1e-62 245.4 506 53.0
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 1.1e-62 245.4 452 51.1
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 1.4e-62 245.0 507 50.1
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 2.4e-62 244.2 570 47.4
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 4.1e-62 243.4 484 54.5
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.2e-61 241.9 475 41.3
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 1.6e-61 241.5 516 51.9
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 1.6e-61 241.5 566 53.7
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.5e-61 240.4 422 38.4
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 1.3e-60 238.4 557 43.6
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 5.0e-60 236.5 475 36.8
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 8.6e-60 235.7 514 51.6
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 2.5e-59 234.2 493 41.0
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 3.3e-59 233.8 508 51.6
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 2.1e-58 231.1 495 51.1
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 2.8e-58 230.7 482 41.7
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 1.4e-57 228.4 508 50.2
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 5.2e-57 226.5 423 50.4
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 6.8e-57 226.1 528 33.0
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 2.6e-56 224.2 509 50.1
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 9.8e-56 222.2 467 52.7
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 1.3e-55 221.9 467 52.7
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 6.3e-55 219.5 415 54.9
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 2.4e-54 217.6 452 43.6
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 1.0e-52 212.2 501 50.1
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 2.5e-51 207.6 182 63.2
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 2.0e-48 198.0 300 60.0
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 1.4e-46 191.8 182 56.6
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 2.4e-46 191.0 209 61.2
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 7.8e-45 186.0 377 57.6
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.0e-44 185.7 137 63.5
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 1.8e-41 174.9 515 40.6
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 4.9e-39 166.8 332 53.0
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 4.1e-38 163.7 125 63.2
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 7.8e-37 159.5 123 98.4
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 4.7e-34 150.2 111 68.5
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 3.5e-29 134.0 337 45.4
QL09p008133 Quercus lobata HOM05D005626 ORTHO05D007372 3.0e-28 131.0 82 80.5
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 5.1e-28 130.2 413 30.0
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 1.9e-27 128.3 147 46.9
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.2e-21 109.0 85 62.4
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.3e-20 105.5 368 26.4
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 3.0e-20 104.4 143 37.8
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 1.4e-17 95.5 142 34.5
MD07G1293400 Malus domestica HOM05D005626 ORTHO05D007372 1.8e-17 95.1 121 52.1
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 9.0e-17 92.8 208 52.4
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 2.0e-16 91.7 56 78.6
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 7.1e-14 83.2 141 31.9
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 2.1e-13 81.6 144 30.6
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.0e-12 79.3 149 25.5
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 1.7e-12 78.6 60 63.3
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 2.3e-12 78.2 52 65.4
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 6.6e-12 76.6 156 35.3
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.6e-10 72.0 80 50.0
Lj1A1021T50 Lonicera japonica HOM05D005626 ORTHO05D007372 6.9e-09 66.6 108 41.7
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 1.9e-06 58.5 61 50.8


User provided reference genes

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