Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4382 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.2e-99 366.7 205 100.0
FAN19G1783 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.1e-97 360.1 204 98.0
FAN03G0195 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.2e-97 358.6 204 98.0
FAN10G2664 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.2e-97 358.6 204 98.0
FAN14G5922 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.2e-97 358.6 204 97.5
FAN17G3014 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.4e-97 357.8 204 98.0
FAN24G0290 Fragaria x ananassa HOM05D003639 ORTHO05D004246 7.1e-97 357.5 204 98.0
FAN02G3905 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.2e-97 357.1 204 98.0
FAN06G0994 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.2e-96 356.7 204 97.5
FAN01G0512 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.6e-96 356.3 204 96.6
FAN23G2202 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.0e-96 354.4 204 95.6
FAN28G1931 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.0e-96 354.4 204 97.1
FAN07G1748 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.7e-95 352.8 204 96.6
FAN22G1757 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.9e-94 349.4 204 96.1
FAN27G3180 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.9e-94 349.4 204 96.1
FAN14G4828 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.4e-91 338.6 204 93.1
FvH4_6g24750 Fragaria vesca HOM05D003639 ORTHO05D004246 2.2e-90 335.9 204 92.6
FAN16G0989 Fragaria x ananassa HOM05D003639 ORTHO05D004246 8.4e-90 334.0 204 93.1
FAN09G0054 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.9e-89 332.8 204 91.7
FAN25G1774 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.2e-82 309.3 204 87.7
FAN05G0107 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.2e-81 305.1 204 85.3
FAN17G0086 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.3e-78 295.0 170 97.6
FAN13G2401 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.8e-77 292.4 160 98.1
RcHm_v2.0_Chr3g0484331 Rosa chinensis HOM05D003639 ORTHO05D004246 3.2e-49 199.1 132 80.3
arahy.Tifrunner.gnm1.ann1.Y8CJQK Arachis hypogaea HOM05D003639 ORTHO05D004246 5.7e-46 188.3 173 64.7
arahy.Tifrunner.gnm1.ann1.6W6BYV Arachis hypogaea HOM05D003639 ORTHO05D004246 1.7e-45 186.8 173 64.2
CSS0048368 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 3.7e-45 185.7 176 63.1
Lj5g0008946 Lotus japonicus HOM05D003639 ORTHO05D004246 4.8e-45 185.3 174 63.2
Peaxi162Scf00130g00929 Petunia axillaris HOM05D003639 ORTHO05D004246 4.8e-45 185.3 184 61.4
Glyma.10G000800 Glycine max HOM05D003639 ORTHO05D004246 1.4e-44 183.7 174 62.1
Eucgr.A02297 Eucalyptus grandis HOM05D003639 ORTHO05D004246 3.1e-44 182.6 177 60.5
Gohir.A12G015000 Gossypium hirsutum HOM05D003639 ORTHO05D004246 3.1e-44 182.6 172 64.5
Gorai.008G015500 Gossypium raimondii HOM05D003639 ORTHO05D004246 3.1e-44 182.6 172 64.5
Prupe.7G050300 Prunus persica HOM05D003639 ORTHO05D004246 3.1e-44 182.6 187 60.4
COL.COLO4_24957 Corchorus olitorius HOM05D003639 ORTHO05D004246 4.1e-44 182.2 173 64.2
Duzib248G1450 Durio zibethinus HOM05D003639 ORTHO05D004246 5.3e-44 181.8 173 63.0
VMungo0720G2842 Vigna mungo HOM05D003639 ORTHO05D004246 5.3e-44 181.8 174 62.1
Actinidia39194 Actinidia chinensis HOM05D003639 ORTHO05D004246 6.9e-44 181.4 173 61.3
MSTRG.6401 Avicennia marina HOM05D003639 ORTHO05D004246 6.9e-44 181.4 185 60.5
Phvul.007G249600 Phaseolus vulgaris HOM05D003639 ORTHO05D004246 6.9e-44 181.4 174 60.9
Rhsim03G0032000 Rhododendron simsii HOM05D003639 ORTHO05D004246 1.2e-43 180.6 155 66.5
Thecc.02G139000 Theobroma cacao HOM05D003639 ORTHO05D004246 1.5e-43 180.3 171 62.6
Gohir.D12G015400 Gossypium hirsutum HOM05D003639 ORTHO05D004246 3.4e-43 179.1 172 64.0
PGSC0003DMG400012703 Solanum tuberosum HOM05D003639 ORTHO05D004246 4.5e-43 178.7 184 58.7
Glyma.02G190600 Glycine max HOM05D003639 ORTHO05D004246 5.9e-43 178.3 174 60.3
MD12G1086300 Malus domestica HOM05D003639 ORTHO05D004246 5.9e-43 178.3 188 59.6
PSO832G3057 Papaver somniferum HOM05D003639 ORTHO05D004246 5.9e-43 178.3 178 57.3
Solyc04g016510.3 Solanum lycopersicum HOM05D003639 ORTHO05D004246 5.9e-43 178.3 184 58.7
CAN.G1237.4 Capsicum annuum HOM05D003639 ORTHO05D004246 1.0e-42 177.6 184 57.6
Duzib132G0222 Durio zibethinus HOM05D003639 ORTHO05D004246 1.3e-42 177.2 173 63.0
Hma1.2p1_2162F.1_g315680 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 1.3e-42 177.2 187 58.8
Nn7g37752 Nelumbo nucifera HOM05D003639 ORTHO05D004246 1.3e-42 177.2 187 59.9
Nitab4.5_0000826g0140 Nicotiana tabacum HOM05D003639 ORTHO05D004246 1.3e-42 177.2 174 59.2
Sopen04g008580 Solanum pennellii HOM05D003639 ORTHO05D004246 1.3e-42 177.2 184 58.2
Haze_19749 Corylus avellana HOM05D003639 ORTHO05D004246 1.7e-42 176.8 177 61.6
Nitab4.5_0001618g0260 Nicotiana tabacum HOM05D003639 ORTHO05D004246 1.7e-42 176.8 174 59.8
TAR369G0628 Trochodendron aralioides HOM05D003639 ORTHO05D004246 2.9e-42 176.0 178 61.2
Oeu023136.1 Olea europaea HOM05D003639 ORTHO05D004246 5.0e-42 175.3 161 61.5
PSO063G3048 Papaver somniferum HOM05D003639 ORTHO05D004246 6.5e-42 174.9 157 62.4
Lj4C34T1 Lonicera japonica HOM05D003639 ORTHO05D004246 1.1e-41 174.1 179 59.2
Lalb_Chr21g0305241 Lupinus albus HOM05D003639 ORTHO05D004246 1.9e-41 173.3 176 60.8
CANSAT80G2101 Cannabis sativa HOM05D003639 ORTHO05D004246 2.5e-41 172.9 186 57.5
Aqoxy3G00063 Aquilegia oxysepala HOM05D003639 ORTHO05D004246 3.2e-41 172.6 161 64.0
SGA_v2.0_scaffold296G47577 Striga asiatica HOM05D003639 ORTHO05D004246 4.2e-41 172.2 175 60.6
Atru.chr1.1191 Acer truncatum HOM05D003639 ORTHO05D004246 5.5e-41 171.8 190 56.8
CiPaw.09G042100 Carya illinoinensis HOM05D003639 ORTHO05D004246 7.2e-41 171.4 186 57.5
PGR004G0521 Punica granatum HOM05D003639 ORTHO05D004246 7.2e-41 171.4 176 61.4
SGA_v2.0_scaffold69G23129 Striga asiatica HOM05D003639 ORTHO05D004246 9.4e-41 171.0 176 57.4
Ca_25791_v3 Cicer arietinum L. HOM05D003639 ORTHO05D004246 1.6e-40 170.2 173 57.8
SalBow6G0945 Salvia bowleyana HOM05D003639 ORTHO05D004246 2.1e-40 169.9 159 62.3
Ciclev10006458m.g Citrus clementina HOM05D003639 ORTHO05D004246 4.7e-40 168.7 174 58.0
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 4.7e-40 168.7 175 57.1
DCAR_014011 Daucus carota HOM05D003639 ORTHO05D004246 6.1e-40 168.3 175 57.7
Dinv30299 Davidia involucrata HOM05D003639 ORTHO05D004246 7.9e-40 167.9 178 58.4
Peaxi162Scf00177g10117 Petunia axillaris HOM05D003639 ORTHO05D004246 7.9e-40 167.9 165 60.6
Psat6g009840 Pisum sativum HOM05D003639 ORTHO05D004246 7.9e-40 167.9 185 56.8
Medtr3g045130 Medicago truncatula HOM05D003639 ORTHO05D004246 1.0e-39 167.5 175 58.3
Hund19126 Selenicereus undatus HOM05D003639 ORTHO05D004246 1.0e-39 167.5 175 57.1
TWI74G0834 Tripterygium wilfordii HOM05D003639 ORTHO05D004246 1.4e-39 167.2 174 58.6
unitig_578.g16292 Utricularia gibba HOM05D003639 ORTHO05D004246 2.3e-39 166.4 155 63.9
unitig_44.g31550 Utricularia gibba HOM05D003639 ORTHO05D004246 3.0e-39 166.0 185 56.8
CSS0037940 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 3.9e-39 165.6 176 58.5
Cpa.g.sc120.6 Carica papaya HOM05D003639 ORTHO05D004246 3.9e-39 165.6 174 60.3
TPR.G1512 Trifolium pratense HOM05D003639 ORTHO05D004246 6.7e-39 164.9 173 58.4
Manes.09G015900 Manihot esculenta HOM05D003639 ORTHO05D004246 8.8e-39 164.5 180 57.2
Sc19g0008460 Simmondsia chinensis HOM05D003639 ORTHO05D004246 1.1e-38 164.1 177 56.5
Ah.13g076790 Amaranthus hybridus HOM05D003639 ORTHO05D004246 1.5e-38 163.7 184 54.3
Zm00001eb017050 Zea mays HOM05D003639 ORTHO05D004246 1.5e-38 163.7 152 58.6
EL10Ac3g07157 Beta vulgaris HOM05D003639 ORTHO05D004246 2.0e-38 163.3 173 57.8
QL07p005224 Quercus lobata HOM05D003639 ORTHO05D004246 2.0e-38 163.3 177 57.6
AUR62026120 Chenopodium quinoa HOM05D003639 ORTHO05D004246 2.6e-38 162.9 185 55.1
CsaV3_6G036200 Cucumis sativus L. HOM05D003639 ORTHO05D004246 3.3e-38 162.5 186 55.9
Lsat_1_v5_gn_4_41600 Lactuca sativa HOM05D003639 ORTHO05D004246 3.3e-38 162.5 191 55.5
MELO3C026433.2 Cucumis melo HOM05D003639 ORTHO05D004246 5.7e-38 161.8 186 55.9
CANSAT80G0359 Cannabis sativa HOM05D003639 ORTHO05D004246 9.7e-38 161.0 186 55.9
Carub.0004s0611 Capsella rubella HOM05D003639 ORTHO05D004246 9.7e-38 161.0 182 56.0
Sp4g23770 Schrenkiella parvula HOM05D003639 ORTHO05D004246 9.7e-38 161.0 170 56.5
C04p69090 Brassica napus HOM05D003639 ORTHO05D004246 1.3e-37 160.6 170 58.2
BolC4t28406H Brassica oleracea HOM05D003639 ORTHO05D004246 1.3e-37 160.6 170 58.2
CDE04G0356 Ceratophyllum demersum HOM05D003639 ORTHO05D004246 1.3e-37 160.6 157 59.9
ClCG08G008940 Citrullus lanatus HOM05D003639 ORTHO05D004246 1.7e-37 160.2 186 54.8
Migut.J01707 Erythranthe guttata HOM05D003639 ORTHO05D004246 1.7e-37 160.2 187 52.4
TPR.G10246 Trifolium pratense HOM05D003639 ORTHO05D004246 1.7e-37 160.2 155 60.6
A04p31660 Brassica napus HOM05D003639 ORTHO05D004246 3.7e-37 159.1 170 57.6
BraA04t18624Z Brassica rapa HOM05D003639 ORTHO05D004246 3.7e-37 159.1 170 57.6
AUR62024528 Chenopodium quinoa HOM05D003639 ORTHO05D004246 3.7e-37 159.1 175 56.6
CARHR136620 Cardamine hirsuta HOM05D003639 ORTHO05D004246 4.8e-37 158.7 170 58.2
Aa31LG1G23520 Aethionema arabicum HOM05D003639 ORTHO05D004246 1.1e-36 157.5 170 57.1
AT2G41500 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 1.8e-36 156.8 170 57.1
THA.LOC104824426 Tarenaya hassleriana HOM05D003639 ORTHO05D004246 2.4e-36 156.4 172 57.6
AL4G39590 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 9.1e-36 154.5 170 55.9
C04p02760 Brassica napus HOM05D003639 ORTHO05D004246 3.5e-35 152.5 160 56.2
Thhalv10000860m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 3.5e-35 152.5 170 54.1
Thhalv10016457m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 5.9e-35 151.8 170 53.5
A05p02320 Brassica napus HOM05D003639 ORTHO05D004246 1.0e-34 151.0 160 55.6
BolC4t21916H Brassica oleracea HOM05D003639 ORTHO05D004246 1.0e-34 151.0 160 55.6
SEGI_17823 Sequoiadendron giganteum HOM05D003639 ORTHO05D004246 1.0e-34 151.0 180 53.9
ATR0665G145 Amborella trichopoda HOM05D003639 ORTHO05D004246 1.7e-34 150.2 175 52.6
Medtr5g022690 Medicago truncatula HOM05D003639 ORTHO05D004246 2.9e-34 149.4 155 57.4
BraA05t19227Z Brassica rapa HOM05D003639 ORTHO05D004246 1.6e-32 143.7 160 53.8
ECA234G2577 Erigeron canadensis HOM05D003639 ORTHO05D004246 4.7e-32 142.1 156 53.8
Os03g0355200 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 4.7e-32 142.1 153 52.3
Os03g0355400 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 4.7e-32 142.1 153 52.3
Sed0002463 Sechium edule HOM05D003639 ORTHO05D004246 6.1e-32 141.7 134 61.9
Hma1.2p1_0338F.1_g129500 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 1.5e-30 137.1 147 55.8
Hma1.2p1_1333F.1_g276240 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 2.0e-30 136.7 147 56.5
Mapoly0061s0123 Marchantia polymorpha HOM05D003639 ORTHO05D004246 2.0e-30 136.7 184 48.9
HPP92_010210 Vanilla planifolia HOM05D000527 ORTHO05D000559 4.4e-30 135.6 158 57.6
BcaNung06794 Brassica carinata HOM05D003639 ORTHO05D004246 9.7e-30 134.4 160 53.1
Potri.006G045800 Populus trichocarpa HOM05D003639 ORTHO05D004246 9.7e-30 134.4 186 50.0
HPP92_010189 Vanilla planifolia HOM05D003639 ORTHO05D004246 2.8e-29 132.9 158 57.0
Pp3c9_11970 Physcomitrium patens HOM05D003639 ORTHO05D004246 1.8e-28 130.2 158 51.9
BolC5t34692H Brassica oleracea HOM05D003639 ORTHO05D004246 4.1e-28 129.0 152 52.6
Sabra06G0031300 Salix brachista HOM05D003639 ORTHO05D004246 5.3e-28 128.6 175 49.7
CBR_g723 Chara braunii HOM05D003639 ORTHO05D004246 3.5e-27 125.9 186 47.8
BcaC02g12784 Brassica carinata HOM05D003639 ORTHO05D004246 8.5e-26 121.3 159 49.1
Medtr0012s0110 Medicago truncatula HOM05D003639 ORTHO05D004246 2.7e-24 116.3 117 59.8
AagrBONN_evm.TU.Sc2ySwM_117.1154 Anthoceros agrestis HOM05D003639 ORTHO05D004246 2.3e-23 113.2 198 43.4
SMO356G0612 Selaginella moellendorffii HOM05D003639 ORTHO05D004246 3.4e-22 109.4 179 40.2
Atru.chr6.1378 Acer truncatum HOM05D003639 ORTHO05D004246 1.4e-20 104.0 118 56.8
Mapoly0014s0154 Marchantia polymorpha HOM05D003639 ORTHO05D004246 3.1e-20 102.8 158 44.9
Potri.016G042250 Populus trichocarpa HOM05D003639 ORTHO05D004246 1.6e-19 100.5 145 49.7
vmacro21947 Vaccinium macrocarpon HOM05D003639 ORTHO05D004246 4.7e-16 89.0 153 45.8
MD14G1080500 Malus domestica HOM05D003639 ORTHO05D004246 3.7e-13 79.3 100 51.0
MCO12G002 Micromonas commoda HOM05D003639 ORTHO05D004246 3.7e-13 79.3 134 40.3
TAR065G0005 Trochodendron aralioides HOM05D003639 ORTHO05D004246 1.8e-12 77.0 91 51.6
Psat4g106880 Pisum sativum HOM05D003639 ORTHO05D004246 2.4e-12 76.6 116 44.8
Cc06_g18350 Coffea canephora HOM05D003639 ORTHO05D004246 9.2e-12 74.7 75 54.7
MELO3C019777.2 Cucumis melo HOM05D003639 ORTHO05D004246 9.2e-12 74.7 84 58.3
VMungo0540G1675 Vigna mungo HOM05D003639 ORTHO05D004246 3.5e-11 72.8 87 49.4
GSVIVG01033551001 Vitis vinifera HOM05D003639 ORTHO05D004246 1.1e-09 67.8 75 52.0
Atru.chr6.1379 Acer truncatum HOM05D003639 ORTHO05D004246 3.0e-07 59.7 53 58.5
BcaNung04072 Brassica carinata HOM05D003639 ORTHO05D004246 3.0e-07 59.7 50 56.0
Cfa024100 Carpinus fangiana HOM05D003639 ORTHO05D004246 5.2e-07 58.9 114 41.2
Psat6g118240 Pisum sativum HOM05D003639 ORTHO05D004246 8.9e-07 58.2 115 39.1
QL04p089213 Quercus lobata HOM05D003639 ORTHO05D004246 8.9e-07 58.2 112 43.8
BcaB06g29187 Brassica carinata HOM05D003639 ORTHO05D004246 5.7e-06 55.5 46 60.9
Sed0000547 Sechium edule HOM05D003639 ORTHO05D004246 9.8e-06 54.7 86 41.9


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