Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 2040.0 1017 100.0
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1967.2 1058 93.7
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 0.0e+00 1954.9 1062 93.0
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1946.4 1115 89.1
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1902.5 1062 90.9
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1816.2 1069 86.6
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1616.7 1079 77.4
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 0.0e+00 1614.7 1083 77.0
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1586.6 1085 75.8
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 0.0e+00 1526.5 1094 72.5
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 0.0e+00 1526.5 1084 72.4
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 0.0e+00 1520.0 1099 71.2
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 0.0e+00 1509.6 1087 71.6
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 0.0e+00 1457.2 1082 68.4
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1456.0 1087 69.2
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 0.0e+00 1445.6 1090 68.6
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1441.4 1084 68.8
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 0.0e+00 1439.9 1096 68.1
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1439.5 1087 68.7
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 0.0e+00 1438.3 1086 68.4
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 0.0e+00 1416.4 1083 67.9
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 0.0e+00 1413.3 1088 67.1
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 0.0e+00 1410.2 1083 67.5
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1409.4 1113 66.8
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 0.0e+00 1405.6 1078 67.8
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 0.0e+00 1405.6 1076 67.5
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 0.0e+00 1401.7 1078 67.4
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 0.0e+00 1401.3 1097 66.6
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 0.0e+00 1399.8 1113 66.5
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 0.0e+00 1399.0 1064 67.6
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 0.0e+00 1394.4 1124 64.7
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 0.0e+00 1394.0 1090 66.1
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 0.0e+00 1390.2 1080 66.8
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 0.0e+00 1386.7 1000 70.4
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1385.2 1078 66.9
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1384.8 1078 66.9
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 0.0e+00 1382.9 1078 66.8
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1382.5 1087 66.9
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 0.0e+00 1382.1 1079 67.0
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 0.0e+00 1381.7 1092 66.5
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 1378.6 1078 66.4
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1378.2 1080 67.3
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 1377.5 1087 66.6
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1373.2 1077 66.3
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 0.0e+00 1370.1 1085 65.4
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 0.0e+00 1369.8 1083 65.9
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 0.0e+00 1368.2 1078 66.4
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 0.0e+00 1366.7 1186 63.8
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 0.0e+00 1365.9 1039 68.2
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 0.0e+00 1365.9 1019 68.5
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 0.0e+00 1365.5 1080 65.8
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 0.0e+00 1361.3 1105 64.1
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 0.0e+00 1360.1 1116 64.4
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 0.0e+00 1352.8 1073 64.9
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 0.0e+00 1350.5 1139 62.8
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 0.0e+00 1345.5 1116 63.4
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1335.1 1107 63.2
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1333.5 1091 64.7
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1330.5 1040 65.8
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 0.0e+00 1330.1 1069 65.6
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1328.9 1076 64.3
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 0.0e+00 1327.4 1066 63.4
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1324.3 1081 63.2
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1323.9 1080 63.1
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1320.1 1044 65.4
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 0.0e+00 1312.4 1075 62.1
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 0.0e+00 1302.0 1035 66.2
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 0.0e+00 1300.8 1076 63.6
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 0.0e+00 1294.3 1076 63.4
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1293.5 1072 64.1
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1292.7 1046 64.5
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 0.0e+00 1285.8 1073 63.2
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 0.0e+00 1285.0 1200 57.6
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 0.0e+00 1279.6 1088 62.4
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 0.0e+00 1272.7 1077 62.7
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 0.0e+00 1260.0 871 72.1
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 0.0e+00 1259.6 1167 58.8
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 0.0e+00 1253.4 872 71.8
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 0.0e+00 1231.9 887 69.8
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 0.0e+00 1210.7 860 70.6
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 0.0e+00 1206.4 1058 58.6
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 0.0e+00 1204.1 871 69.9
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 0.0e+00 1200.3 844 70.9
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 0.0e+00 1175.6 869 67.7
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 0.0e+00 1172.5 821 72.4
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 0.0e+00 1152.1 875 67.1
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 0.0e+00 1140.6 825 68.7
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 0.0e+00 1139.8 920 64.6
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 0.0e+00 1138.6 1085 56.7
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 0.0e+00 1133.6 1203 53.6
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 0.0e+00 1130.5 1087 56.1
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1119.8 1047 57.8
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1089.3 997 60.5
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1086.6 1006 60.0
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1083.9 1077 56.5
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 2.2e-308 1062.4 866 62.2
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 3.3e-304 1048.5 1039 54.9
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.3e-276 956.8 700 69.9
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 8.0e-258 894.4 887 54.7
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.1e-254 884.0 598 73.7
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 2.1e-250 869.8 1096 44.6
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 6.8e-241 838.2 645 66.0
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 8.9e-241 837.8 1012 46.1
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 2.2e-231 806.6 968 44.8
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.6e-226 790.4 699 60.8
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.5e-211 740.7 378 96.8
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 9.9e-200 701.4 947 42.1
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 1.3e-188 664.5 498 68.7
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 6.5e-183 645.6 538 64.3
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 2.2e-138 497.7 1072 33.5
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 3.7e-138 496.9 472 57.0
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.4e-132 478.4 405 62.7
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 7.1e-105 386.3 320 62.2
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.4e-97 362.1 389 50.1
Cpa.g.sc169.28 Carica papaya HOM05D001849 ORTHO05D004689 1.5e-94 352.1 223 78.0
CSS0033574 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.9e-74 284.6 225 68.4
CSS0020573 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.1e-68 266.2 241 61.0
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 1.1e-60 239.6 278 48.2
Glyma.16G010300 Glycine max HOM05D001849 ORTHO05D004689 2.9e-58 231.5 160 71.9
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 2.3e-55 221.9 174 64.4
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 5.3e-52 210.7 201 59.7
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 1.9e-49 202.2 217 56.2
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 3.3e-46 191.4 202 58.4
HPP92_021920 Vanilla planifolia HOM05D001849 ORTHO05D004689 2.6e-43 181.8 144 63.2
SEGI_09459 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 2.0e-38 165.6 176 48.3
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 2.2e-37 162.2 166 54.2
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 2.5e-33 148.7 183 50.3
MBI18_g40032_MAGBIO Magnolia biondii HOM05D000132 ORTHO05D000058 4.2e-33 147.9 94 72.3
Cpa.g.sc169.31 Carica papaya HOM05D001849 ORTHO05D004689 1.4e-31 142.9 84 81.0
Lsat_1_v5_gn_8_46020 Lactuca sativa HOM05D001849 ORTHO05D004689 1.5e-30 139.4 83 80.7
Cpa.g.sc169.33 Carica papaya HOM05D001849 ORTHO05D004689 6.3e-29 134.0 159 53.5
CDE07G1706 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 2.4e-28 132.1 194 45.9
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.1e-28 131.7 181 47.5
SEGI_30532 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 3.5e-27 128.3 89 67.4
Duzib235G0009 Durio zibethinus HOM05D001849 ORTHO05D004689 1.3e-26 126.3 173 50.9
HanXRQChr11g0341991 Helianthus annuus HOM05D001849 ORTHO05D004689 7.2e-25 120.6 90 64.4
CSS0019722 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 9.4e-25 120.2 181 43.1
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 9.4e-25 120.2 102 56.9
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.7e-24 118.6 100 58.0
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 4.7e-24 117.9 99 59.6
TAR730G0002 Trochodendron aralioides HOM05D001849 ORTHO05D004689 1.7e-21 109.4 151 50.3
Hund18673 Selenicereus undatus HOM05D001849 ORTHO05D004689 2.8e-21 108.6 166 47.6
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 1.4e-20 106.3 170 39.4
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 2.2e-18 99.0 111 50.5
PRCOL_00005073 Prasinoderma coloniale HOM05D001849 ORTHO05D004689 5.5e-17 94.4 422 25.1
MCO04G165 Micromonas commoda HOM05D001849 ORTHO05D004689 1.6e-16 92.8 488 24.6
Cre10.g425675 Chlamydomonas reinhardtii HOM05D001849 ORTHO05D004689 1.4e-15 89.7 337 24.9
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 4.4e-14 84.7 73 61.6
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.8e-13 82.0 100 45.0
BcaNung06672 Brassica carinata HOM05D001849 ORTHO05D004689 3.7e-13 81.6 71 59.2
MBI03_g16538_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 8.3e-13 80.5 67 56.7
MBI04_g26258_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.1e-12 80.1 77 54.5
MBI13_g27860_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 9.2e-12 77.0 52 69.2
MBI15_g17575_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 3.5e-11 75.1 53 66.0
Zm00001eb307710 Zea mays HOM05D001849 ORTHO05D004689 4.5e-11 74.7 70 60.0
BolC2t10453H Brassica oleracea HOM05D001849 ORTHO05D004689 1.0e-10 73.6 55 65.5
Atru.chr12.2396 Acer truncatum HOM05D001849 ORTHO05D004689 1.9e-09 69.3 133 38.3
C02p44100 Brassica napus HOM05D001849 ORTHO05D004689 4.3e-09 68.2 55 61.8
SMO304G0098 Selaginella moellendorffii HOM05D027722 ORTHO05D004689 5.6e-09 67.8 161 29.8
SMO304G0058 Selaginella moellendorffii HOM05D042764 ORTHO05D004689 2.3e-07 62.4 190 27.9
Hma1.2p1_0225F.1_g094790 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 3.4e-06 58.5 132 37.1
CSS0017686 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 5.7e-06 57.8 50 54.0
CSS0002239 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 7.5e-06 57.4 41 63.4


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