Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN06G0994 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.5e-105 386.3 213 100.0
FAN03G0195 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.8e-104 381.3 213 98.6
FAN10G2664 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.8e-104 381.3 213 98.6
FAN14G5922 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.8e-104 381.3 213 98.1
FAN17G3014 Fragaria x ananassa HOM05D003639 ORTHO05D004246 8.1e-104 380.6 213 98.6
FAN19G1783 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.8e-103 379.4 213 98.1
FAN24G0290 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.3e-103 377.9 213 98.1
FAN01G0512 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.0e-103 377.1 213 96.7
FAN23G2202 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.0e-103 377.1 213 96.2
FAN28G1931 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.0e-103 377.1 213 97.7
FAN07G1748 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.6e-102 375.6 213 97.2
FAN02G3905 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.9e-102 373.6 209 98.6
FAN22G1757 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.9e-101 372.1 213 96.7
FAN27G3180 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.9e-101 372.1 213 96.7
FAN09G4382 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.6e-97 357.1 204 97.5
FAN16G0989 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.3e-96 356.7 213 93.9
FAN14G4828 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.6e-96 355.1 209 93.8
FvH4_6g24750 Fragaria vesca HOM05D003639 ORTHO05D004246 2.4e-95 352.4 209 93.3
FAN09G0054 Fragaria x ananassa HOM05D003639 ORTHO05D004246 7.6e-94 347.4 209 91.9
FAN25G1774 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.3e-89 332.0 213 88.7
FAN05G0107 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.7e-85 319.7 209 85.6
FAN13G2401 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.3e-82 310.1 169 97.6
FAN17G0086 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.1e-79 298.9 170 98.2
RcHm_v2.0_Chr3g0484331 Rosa chinensis HOM05D003639 ORTHO05D004246 4.2e-52 208.8 137 80.3
arahy.Tifrunner.gnm1.ann1.Y8CJQK Arachis hypogaea HOM05D003639 ORTHO05D004246 7.5e-49 198.0 178 65.2
arahy.Tifrunner.gnm1.ann1.6W6BYV Arachis hypogaea HOM05D003639 ORTHO05D004246 2.2e-48 196.4 178 64.6
CSS0048368 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 3.7e-48 195.7 193 61.1
Lj5g0008946 Lotus japonicus HOM05D003639 ORTHO05D004246 6.3e-48 194.9 180 63.3
Peaxi162Scf00130g00929 Petunia axillaris HOM05D003639 ORTHO05D004246 1.4e-47 193.7 189 61.4
Gohir.A12G015000 Gossypium hirsutum HOM05D003639 ORTHO05D004246 4.1e-47 192.2 177 65.0
Gorai.008G015500 Gossypium raimondii HOM05D003639 ORTHO05D004246 4.1e-47 192.2 177 65.0
Duzib248G1450 Durio zibethinus HOM05D003639 ORTHO05D004246 7.0e-47 191.4 178 63.5
Glyma.10G000800 Glycine max HOM05D003639 ORTHO05D004246 7.0e-47 191.4 179 62.0
Actinidia39194 Actinidia chinensis HOM05D003639 ORTHO05D004246 9.1e-47 191.0 178 61.8
Eucgr.A02297 Eucalyptus grandis HOM05D003639 ORTHO05D004246 9.1e-47 191.0 180 61.1
Phvul.007G249600 Phaseolus vulgaris HOM05D003639 ORTHO05D004246 9.1e-47 191.0 179 61.5
COL.COLO4_24957 Corchorus olitorius HOM05D003639 ORTHO05D004246 1.6e-46 190.3 178 64.0
Prupe.7G050300 Prunus persica HOM05D003639 ORTHO05D004246 1.6e-46 190.3 192 60.4
Thecc.02G139000 Theobroma cacao HOM05D003639 ORTHO05D004246 1.6e-46 190.3 178 62.4
Rhsim03G0032000 Rhododendron simsii HOM05D003639 ORTHO05D004246 2.7e-46 189.5 160 66.2
VMungo0720G2842 Vigna mungo HOM05D003639 ORTHO05D004246 2.7e-46 189.5 179 62.0
MSTRG.6401 Avicennia marina HOM05D003639 ORTHO05D004246 4.5e-46 188.7 190 60.0
Gohir.D12G015400 Gossypium hirsutum HOM05D003639 ORTHO05D004246 4.5e-46 188.7 177 64.4
PSO832G3057 Papaver somniferum HOM05D003639 ORTHO05D004246 7.7e-46 188.0 183 57.9
CAN.G1237.4 Capsicum annuum HOM05D003639 ORTHO05D004246 1.0e-45 187.6 180 60.0
Hma1.2p1_2162F.1_g315680 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 1.0e-45 187.6 183 61.7
Nitab4.5_0000826g0140 Nicotiana tabacum HOM05D003639 ORTHO05D004246 1.7e-45 186.8 180 61.7
Glyma.02G190600 Glycine max HOM05D003639 ORTHO05D004246 2.9e-45 186.0 179 60.3
Nitab4.5_0001618g0260 Nicotiana tabacum HOM05D003639 ORTHO05D004246 3.8e-45 185.7 189 58.2
PGSC0003DMG400012703 Solanum tuberosum HOM05D003639 ORTHO05D004246 3.8e-45 185.7 181 60.2
TAR369G0628 Trochodendron aralioides HOM05D003639 ORTHO05D004246 3.8e-45 185.7 183 61.7
Duzib132G0222 Durio zibethinus HOM05D003639 ORTHO05D004246 5.0e-45 185.3 178 62.9
Solyc04g016510.3 Solanum lycopersicum HOM05D003639 ORTHO05D004246 5.0e-45 185.3 180 60.6
Haze_19749 Corylus avellana HOM05D003639 ORTHO05D004246 6.5e-45 184.9 182 61.5
Sopen04g008580 Solanum pennellii HOM05D003639 ORTHO05D004246 1.1e-44 184.1 180 60.0
PSO063G3048 Papaver somniferum HOM05D003639 ORTHO05D004246 2.5e-44 183.0 162 62.3
Lj4C34T1 Lonicera japonica HOM05D003639 ORTHO05D004246 3.2e-44 182.6 184 59.2
SGA_v2.0_scaffold296G47577 Striga asiatica HOM05D003639 ORTHO05D004246 3.2e-44 182.6 191 59.2
CANSAT80G2101 Cannabis sativa HOM05D003639 ORTHO05D004246 4.2e-44 182.2 183 58.5
Atru.chr1.1191 Acer truncatum HOM05D003639 ORTHO05D004246 7.2e-44 181.4 187 59.4
Nn7g37752 Nelumbo nucifera HOM05D003639 ORTHO05D004246 7.2e-44 181.4 195 59.0
Lalb_Chr21g0305241 Lupinus albus HOM05D003639 ORTHO05D004246 9.4e-44 181.0 181 60.8
PGR004G0521 Punica granatum HOM05D003639 ORTHO05D004246 9.4e-44 181.0 181 61.9
Aqoxy3G00063 Aquilegia oxysepala HOM05D003639 ORTHO05D004246 1.2e-43 180.6 166 63.9
CiPaw.09G042100 Carya illinoinensis HOM05D003639 ORTHO05D004246 1.6e-43 180.3 183 60.7
Oeu023136.1 Olea europaea HOM05D003639 ORTHO05D004246 1.6e-43 180.3 189 57.1
SGA_v2.0_scaffold69G23129 Striga asiatica HOM05D003639 ORTHO05D004246 1.6e-43 180.3 192 55.2
MD12G1086300 Malus domestica HOM05D003639 ORTHO05D004246 3.6e-43 179.1 195 57.9
Ca_25791_v3 Cicer arietinum L. HOM05D003639 ORTHO05D004246 6.1e-43 178.3 178 57.9
DCAR_014011 Daucus carota HOM05D003639 ORTHO05D004246 6.1e-43 178.3 180 58.3
Dinv30299 Davidia involucrata HOM05D003639 ORTHO05D004246 1.0e-42 177.6 183 59.0
Hund19126 Selenicereus undatus HOM05D003639 ORTHO05D004246 1.4e-42 177.2 180 57.8
SalBow6G0945 Salvia bowleyana HOM05D003639 ORTHO05D004246 1.8e-42 176.8 164 61.6
TWI74G0834 Tripterygium wilfordii HOM05D003639 ORTHO05D004246 1.8e-42 176.8 181 58.6
Peaxi162Scf00177g10117 Petunia axillaris HOM05D003639 ORTHO05D004246 3.0e-42 176.0 172 59.9
Psat6g009840 Pisum sativum HOM05D003639 ORTHO05D004246 3.0e-42 176.0 190 56.8
QL07p005224 Quercus lobata HOM05D003639 ORTHO05D004246 3.0e-42 176.0 182 58.8
CSS0037940 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 4.0e-42 175.6 193 57.0
Cpa.g.sc120.6 Carica papaya HOM05D003639 ORTHO05D004246 1.2e-41 174.1 179 60.3
Manes.09G015900 Manihot esculenta HOM05D003639 ORTHO05D004246 1.2e-41 174.1 185 57.8
Ciclev10006458m.g Citrus clementina HOM05D003639 ORTHO05D004246 1.5e-41 173.7 177 58.2
Medtr3g045130 Medicago truncatula HOM05D003639 ORTHO05D004246 1.5e-41 173.7 180 57.8
EL10Ac3g07157 Beta vulgaris HOM05D003639 ORTHO05D004246 2.6e-41 172.9 180 57.8
TPR.G1512 Trifolium pratense HOM05D003639 ORTHO05D004246 2.6e-41 172.9 178 58.4
unitig_578.g16292 Utricularia gibba HOM05D003639 ORTHO05D004246 3.4e-41 172.6 194 56.2
unitig_44.g31550 Utricularia gibba HOM05D003639 ORTHO05D004246 4.4e-41 172.2 188 55.9
Sp4g23770 Schrenkiella parvula HOM05D003639 ORTHO05D004246 5.7e-41 171.8 180 55.6
Ah.13g076790 Amaranthus hybridus HOM05D003639 ORTHO05D004246 7.5e-41 171.4 179 55.3
C04p69090 Brassica napus HOM05D003639 ORTHO05D004246 7.5e-41 171.4 180 57.2
BolC4t28406H Brassica oleracea HOM05D003639 ORTHO05D004246 7.5e-41 171.4 180 57.2
AUR62026120 Chenopodium quinoa HOM05D003639 ORTHO05D004246 1.3e-40 170.6 190 55.3
A04p31660 Brassica napus HOM05D003639 ORTHO05D004246 2.2e-40 169.9 180 56.7
BraA04t18624Z Brassica rapa HOM05D003639 ORTHO05D004246 2.2e-40 169.9 180 56.7
CANSAT80G0359 Cannabis sativa HOM05D003639 ORTHO05D004246 2.2e-40 169.9 183 56.8
Carub.0004s0611 Capsella rubella HOM05D003639 ORTHO05D004246 2.2e-40 169.9 177 57.6
Lsat_1_v5_gn_4_41600 Lactuca sativa HOM05D003639 ORTHO05D004246 2.2e-40 169.9 194 55.7
Sc19g0008460 Simmondsia chinensis HOM05D003639 ORTHO05D004246 2.2e-40 169.9 182 56.0
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 2.8e-40 169.5 187 55.1
CARHR136620 Cardamine hirsuta HOM05D003639 ORTHO05D004246 6.3e-40 168.3 180 56.7
CsaV3_6G036200 Cucumis sativus L. HOM05D003639 ORTHO05D004246 6.3e-40 168.3 184 56.5
MELO3C026433.2 Cucumis melo HOM05D003639 ORTHO05D004246 1.1e-39 167.5 184 56.5
Migut.J01707 Erythranthe guttata HOM05D003639 ORTHO05D004246 1.1e-39 167.5 192 52.1
ClCG08G008940 Citrullus lanatus HOM05D003639 ORTHO05D004246 1.8e-39 166.8 184 56.0
TPR.G10246 Trifolium pratense HOM05D003639 ORTHO05D004246 1.8e-39 166.8 160 60.0
THA.LOC104824426 Tarenaya hassleriana HOM05D003639 ORTHO05D004246 2.4e-39 166.4 181 56.9
AUR62024528 Chenopodium quinoa HOM05D003639 ORTHO05D004246 3.1e-39 166.0 180 56.1
CDE04G0356 Ceratophyllum demersum HOM05D003639 ORTHO05D004246 9.1e-39 164.5 162 59.3
Zm00001eb017050 Zea mays HOM05D003639 ORTHO05D004246 9.1e-39 164.5 159 56.6
AT2G41500 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 1.2e-38 164.1 175 56.6
Aa31LG1G23520 Aethionema arabicum HOM05D003639 ORTHO05D004246 1.6e-38 163.7 179 55.3
C04p02760 Brassica napus HOM05D003639 ORTHO05D004246 2.7e-38 162.9 170 55.3
Thhalv10016457m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 3.5e-38 162.5 180 52.8
AL4G39590 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 5.9e-38 161.8 175 55.4
BolC4t21916H Brassica oleracea HOM05D003639 ORTHO05D004246 7.7e-38 161.4 170 54.7
Thhalv10000860m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 7.7e-38 161.4 180 52.8
A05p02320 Brassica napus HOM05D003639 ORTHO05D004246 1.0e-37 161.0 170 54.7
Medtr5g022690 Medicago truncatula HOM05D003639 ORTHO05D004246 3.2e-36 156.0 160 56.9
SEGI_17823 Sequoiadendron giganteum HOM05D003639 ORTHO05D004246 7.2e-36 154.8 197 50.8
BraA05t19227Z Brassica rapa HOM05D003639 ORTHO05D004246 1.2e-35 154.1 170 52.9
ATR0665G145 Amborella trichopoda HOM05D003639 ORTHO05D004246 3.6e-35 152.5 191 50.3
Sed0002463 Sechium edule HOM05D003639 ORTHO05D004246 8.0e-35 151.4 139 62.6
ECA234G2577 Erigeron canadensis HOM05D003639 ORTHO05D004246 3.0e-34 149.4 159 54.1
Hma1.2p1_0338F.1_g129500 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 2.0e-33 146.7 152 56.6
Hma1.2p1_1333F.1_g276240 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 2.6e-33 146.4 152 57.2
Potri.006G045800 Populus trichocarpa HOM05D003639 ORTHO05D004246 5.7e-33 145.2 182 51.6
BcaNung06794 Brassica carinata HOM05D003639 ORTHO05D004246 1.7e-32 143.7 170 51.8
Os03g0355200 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 2.8e-32 142.9 158 51.3
Os03g0355400 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 2.8e-32 142.9 158 51.3
Mapoly0061s0123 Marchantia polymorpha HOM05D003639 ORTHO05D004246 4.5e-30 135.6 200 46.0
HPP92_010210 Vanilla planifolia HOM05D000527 ORTHO05D000559 4.5e-30 135.6 158 57.6
HPP92_010189 Vanilla planifolia HOM05D003639 ORTHO05D004246 2.9e-29 132.9 158 57.0
BcaC02g12784 Brassica carinata HOM05D003639 ORTHO05D004246 6.6e-29 131.7 169 48.5
Pp3c9_11970 Physcomitrium patens HOM05D003639 ORTHO05D004246 1.9e-28 130.2 161 50.9
BolC5t34692H Brassica oleracea HOM05D003639 ORTHO05D004246 4.3e-28 129.0 152 52.6
Sabra06G0031300 Salix brachista HOM05D003639 ORTHO05D004246 4.3e-28 129.0 160 52.5
CBR_g723 Chara braunii HOM05D003639 ORTHO05D004246 1.8e-26 123.6 189 47.1
Medtr0012s0110 Medicago truncatula HOM05D003639 ORTHO05D004246 2.9e-24 116.3 117 59.8
AagrBONN_evm.TU.Sc2ySwM_117.1154 Anthoceros agrestis HOM05D003639 ORTHO05D004246 8.3e-24 114.8 202 43.1
SMO356G0612 Selaginella moellendorffii HOM05D003639 ORTHO05D004246 7.8e-22 108.2 178 39.9
Atru.chr6.1378 Acer truncatum HOM05D003639 ORTHO05D004246 1.1e-20 104.4 102 62.7
Mapoly0014s0154 Marchantia polymorpha HOM05D003639 ORTHO05D004246 1.9e-20 103.6 163 43.6
Potri.016G042250 Populus trichocarpa HOM05D003639 ORTHO05D004246 4.3e-20 102.4 185 43.8
vmacro21947 Vaccinium macrocarpon HOM05D003639 ORTHO05D004246 1.1e-15 87.8 163 43.6
TAR065G0005 Trochodendron aralioides HOM05D003639 ORTHO05D004246 2.4e-15 86.7 96 53.1
Cc06_g18350 Coffea canephora HOM05D003639 ORTHO05D004246 1.2e-14 84.3 80 56.2
MD14G1080500 Malus domestica HOM05D003639 ORTHO05D004246 2.0e-14 83.6 107 49.5
MCO12G002 Micromonas commoda HOM05D003639 ORTHO05D004246 7.8e-14 81.6 136 41.2
VMungo0540G1675 Vigna mungo HOM05D003639 ORTHO05D004246 3.9e-13 79.3 92 48.9
Psat4g106880 Pisum sativum HOM05D003639 ORTHO05D004246 4.3e-12 75.9 116 44.8
GSVIVG01033551001 Vitis vinifera HOM05D003639 ORTHO05D004246 9.5e-12 74.7 78 52.6
MELO3C019777.2 Cucumis melo HOM05D003639 ORTHO05D004246 1.1e-10 71.2 77 58.4
BcaNung04072 Brassica carinata HOM05D003639 ORTHO05D004246 1.8e-10 70.5 64 54.7
Atru.chr6.1379 Acer truncatum HOM05D003639 ORTHO05D004246 4.0e-10 69.3 58 60.3
BcaB06g29187 Brassica carinata HOM05D003639 ORTHO05D004246 1.5e-09 67.4 56 58.9
Psat6g118240 Pisum sativum HOM05D003639 ORTHO05D004246 3.4e-09 66.2 120 40.0
Sed0000547 Sechium edule HOM05D003639 ORTHO05D004246 1.3e-08 64.3 91 44.0
Cfa024100 Carpinus fangiana HOM05D003639 ORTHO05D004246 2.4e-07 60.1 118 40.7
QL04p089213 Quercus lobata HOM05D003639 ORTHO05D004246 9.2e-07 58.2 112 43.8


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