Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 6.6e-218 760.4 375 100.0
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 5.4e-212 740.7 378 97.1
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.7e-211 738.4 378 96.8
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 3.5e-211 738.0 378 96.6
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 1.6e-208 729.2 382 95.0
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.8e-208 728.4 382 95.0
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 1.0e-186 656.8 386 86.0
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 2.6e-158 562.4 402 72.9
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 6.5e-157 557.8 396 73.5
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 4.2e-156 555.1 400 73.0
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 2.8e-152 542.3 405 69.9
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 6.3e-152 541.2 405 69.1
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 1.3e-149 533.5 401 69.3
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 3.2e-148 528.9 404 67.6
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 5.5e-148 528.1 405 68.4
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 1.2e-147 526.9 408 67.6
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 1.4e-146 523.5 418 66.3
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 2.6e-145 519.2 411 67.9
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 2.6e-145 519.2 405 66.7
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 9.8e-145 517.3 397 68.0
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 4.8e-144 515.0 401 66.8
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 6.3e-144 514.6 397 68.3
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 1.1e-143 513.8 397 67.0
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 1.1e-143 513.8 397 67.0
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 2.4e-143 512.7 397 66.8
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 2.4e-143 512.7 397 66.8
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 2.4e-143 512.7 406 67.2
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 3.1e-143 512.3 406 67.2
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 3.1e-143 512.3 414 65.5
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 5.4e-143 511.5 391 68.8
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 1.2e-142 510.4 397 68.5
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 1.2e-142 510.4 401 67.8
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 1.6e-142 510.0 405 66.4
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 3.5e-142 508.8 397 66.2
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 8.6e-141 504.2 397 66.8
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 1.1e-140 503.8 397 65.7
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 3.3e-140 502.3 398 65.8
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 9.5e-140 500.7 401 66.3
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 1.2e-139 500.4 397 66.0
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 8.9e-138 494.2 431 61.9
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 8.9e-138 494.2 419 63.5
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.5e-137 493.4 400 65.8
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 1.5e-137 493.4 405 64.9
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 2.0e-137 493.0 431 61.9
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 4.4e-137 491.9 390 65.6
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 5.7e-137 491.5 469 60.3
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 7.5e-137 491.1 393 65.9
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 6.3e-136 488.0 386 64.8
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.4e-135 486.9 395 66.1
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 2.4e-135 486.1 387 63.8
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 3.5e-134 482.3 405 63.5
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 6.6e-133 478.0 395 65.1
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 1.1e-132 477.2 446 58.7
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 1.9e-132 476.5 404 63.9
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 5.6e-132 474.9 319 74.0
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 7.3e-132 474.6 461 56.8
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 9.5e-132 474.2 356 68.3
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 2.8e-131 472.6 399 62.7
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 2.8e-131 472.6 400 62.2
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 3.6e-131 472.2 400 62.0
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 4.7e-131 471.9 397 61.7
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 6.1e-131 471.5 425 60.5
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 1.4e-130 470.3 392 62.5
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 1.4e-130 470.3 399 63.4
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 2.6e-129 466.1 398 62.6
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 5.8e-129 464.9 398 62.3
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 4.9e-128 461.8 399 62.2
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 9.2e-127 457.6 392 61.7
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 7.8e-126 454.5 336 69.0
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 1.0e-125 454.1 405 60.5
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 1.9e-124 449.9 394 60.4
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 2.5e-124 449.5 438 56.4
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 4.3e-124 448.7 397 62.2
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.3e-124 448.7 401 61.8
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.2e-123 447.2 379 64.1
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 8.9e-122 441.0 390 62.8
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 2.0e-121 439.9 391 58.6
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.4e-120 434.9 414 59.9
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 1.3e-117 427.2 523 48.8
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 1.7e-117 426.8 398 60.1
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 5.1e-117 425.2 451 54.5
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 1.8e-114 416.8 382 57.6
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.5e-113 413.7 412 57.5
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 8.3e-112 407.9 400 55.2
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 8.6e-109 397.9 422 56.4
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 4.0e-106 389.0 384 57.8
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 6.2e-99 365.2 257 71.2
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 9.9e-97 357.8 403 50.6
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 3.3e-92 342.8 369 52.0
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 1.7e-88 330.5 193 81.3
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 1.1e-87 327.8 208 76.4
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 2.7e-86 323.2 193 78.8
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 1.3e-83 314.3 182 82.4
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 3.7e-83 312.8 193 75.6
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 8.4e-80 301.6 378 48.7
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 5.5e-79 298.9 185 75.1
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 5.5e-79 298.9 193 74.1
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.2e-78 297.7 191 73.8
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 3.9e-77 292.7 409 42.8
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.3e-72 277.7 179 76.5
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 3.8e-72 276.2 165 79.4
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 9.3e-71 271.6 327 46.8
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 3.0e-69 266.5 279 48.0
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 2.7e-62 243.4 140 82.1
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 4.6e-62 242.7 146 78.8
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 4.3e-60 236.1 261 48.7
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 5.0e-56 222.6 291 43.0
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 1.5e-49 201.1 201 58.7
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 9.4e-47 191.8 217 53.9
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 1.1e-44 184.9 202 56.9
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 4.7e-38 162.9 141 61.0
MBI18_g40032_MAGBIO Magnolia biondii HOM05D000132 ORTHO05D000058 7.0e-34 149.1 94 73.4
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 3.8e-32 143.3 183 48.6
Cpa.g.sc169.31 Carica papaya HOM05D001849 ORTHO05D004689 4.2e-31 139.8 84 78.6
CDE07G1706 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.5e-28 131.3 191 46.6
Cpa.g.sc169.33 Carica papaya HOM05D001849 ORTHO05D004689 5.7e-28 129.4 157 52.9
SEGI_30532 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 2.2e-27 127.5 88 68.2
Duzib235G0009 Durio zibethinus HOM05D001849 ORTHO05D004689 3.5e-25 120.2 173 48.6
Hund18673 Selenicereus undatus HOM05D001849 ORTHO05D004689 1.2e-20 105.1 166 44.6
TAR730G0002 Trochodendron aralioides HOM05D001849 ORTHO05D004689 4.9e-19 99.8 151 47.7
MBI03_g16538_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.3e-13 80.9 67 56.7
MBI04_g26258_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.3e-13 80.9 77 54.5
Cre10.g425675 Chlamydomonas reinhardtii HOM05D001849 ORTHO05D004689 6.8e-13 79.3 316 25.3
MBI13_g27860_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.0e-12 77.8 52 69.2
MCO04G165 Micromonas commoda HOM05D001849 ORTHO05D004689 5.8e-12 76.3 333 26.7
MBI15_g17575_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 9.8e-12 75.5 53 66.0
Atru.chr12.2396 Acer truncatum HOM05D001849 ORTHO05D004689 2.3e-08 64.3 133 37.6
SMO304G0058 Selaginella moellendorffii HOM05D042764 ORTHO05D004689 3.9e-08 63.5 190 27.9
RcHm_v2.0_Chr7g0231651 Rosa chinensis HOM05D056344 ORTHO05D004689 6.2e-06 56.2 34 76.5


User provided reference genes

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