Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02504 Eucalyptus grandis HOM05D000113 ORTHO05D012125 2.0e-102 375.9 213 100.0
Cfa019308 Carpinus fangiana HOM05D000113 ORTHO05D002571 8.8e-58 227.6 208 65.4
Haze_07691 Corylus avellana HOM05D000113 ORTHO05D002571 5.7e-57 224.9 208 64.9
PGR044G1093 Punica granatum HOM05D000113 ORTHO05D002571 4.4e-49 198.7 209 59.8
Manes.13G073000 Manihot esculenta HOM05D000113 ORTHO05D002571 1.3e-48 197.2 205 58.5
AL1G46740 Arabidopsis lyrata HOM05D000113 ORTHO05D002571 5.3e-47 191.8 204 58.3
AT1G32490 Arabidopsis thaliana HOM05D000113 ORTHO05D002571 5.3e-47 191.8 206 58.3
Gohir.A12G181200 Gossypium hirsutum HOM05D000113 ORTHO05D002571 3.8e-45 185.7 207 54.6
Gohir.D12G183900 Gossypium hirsutum HOM05D000113 ORTHO05D002571 5.5e-44 181.8 207 53.6
Lalb_Chr13g0294241 Lupinus albus HOM05D000113 ORTHO05D002571 5.2e-42 175.3 208 53.4
Prupe.5G201700 Prunus persica HOM05D000113 ORTHO05D002571 4.4e-41 172.2 208 54.3
AL4G31370 Arabidopsis lyrata HOM05D000113 ORTHO05D002571 1.3e-40 170.6 209 51.2
Glyma.01G040900 Glycine max HOM05D000113 ORTHO05D002571 2.8e-40 169.5 210 51.9
Nitab4.5_0001410g0130 Nicotiana tabacum HOM05D000113 ORTHO05D002571 2.8e-40 169.5 206 51.5
Ca_13800_v3 Cicer arietinum L. HOM05D000113 ORTHO05D002571 3.7e-40 169.1 214 51.9
TAR374G0746 Trochodendron aralioides HOM05D000113 ORTHO05D002571 3.7e-40 169.1 208 51.9
Carub.0001s3090 Capsella rubella HOM05D000113 ORTHO05D002571 1.4e-39 167.2 206 50.0
Gorai.008G197200 Gossypium raimondii HOM05D000113 ORTHO05D002571 1.4e-39 167.2 207 50.2
Sopen03g034400 Solanum pennellii HOM05D000113 ORTHO05D002571 1.8e-39 166.8 211 52.6
TWI73G0006 Tripterygium wilfordii HOM05D000113 ORTHO05D002571 4.1e-39 165.6 209 48.3
Aqoxy3G03585 Aquilegia oxysepala HOM05D000113 ORTHO05D002571 1.2e-38 164.1 211 52.1
Sp1g28410 Schrenkiella parvula HOM05D000113 ORTHO05D002571 1.2e-38 164.1 206 52.9
CARHR031940 Cardamine hirsuta HOM05D000113 ORTHO05D002571 1.6e-38 163.7 206 48.5
Dinv38794 Davidia involucrata HOM05D000113 ORTHO05D002571 2.7e-38 162.9 204 52.5
PSO063G4203 Papaver somniferum HOM05D000113 ORTHO05D002571 2.7e-38 162.9 210 49.5
Medtr1g010030 Medicago truncatula HOM05D000113 ORTHO05D002571 3.5e-38 162.5 208 51.9
ECA232G2775 Erigeron canadensis HOM05D000113 ORTHO05D002571 7.7e-38 161.4 204 46.6
AT2G35340 Arabidopsis thaliana HOM05D000113 ORTHO05D002571 1.7e-37 160.2 208 48.6
unitig_8.g2956 Utricularia gibba HOM05D000113 ORTHO05D002571 1.7e-37 160.2 203 47.3
arahy.Tifrunner.gnm1.ann1.LUB4JJ Arachis hypogaea HOM05D000113 ORTHO05D002571 3.8e-37 159.1 209 50.7
PSO013G0399 Papaver somniferum HOM05D000113 ORTHO05D012125 3.8e-37 159.1 209 47.4
PSO409G0035 Papaver somniferum HOM05D000113 ORTHO05D002571 1.9e-36 156.8 211 48.8
HPP92_010044 Vanilla planifolia HOM05D000113 ORTHO05D002571 4.2e-36 155.6 208 46.6
Duzib205G1857 Durio zibethinus HOM05D000113 ORTHO05D002571 1.0e-34 151.0 207 50.2
GSVIVG01007911001 Vitis vinifera HOM05D000113 ORTHO05D002571 1.0e-34 151.0 208 48.1
Sabra15G0006800 Salix brachista HOM05D000113 ORTHO05D002571 1.4e-34 150.6 209 48.3
CiPaw.11G050600 Carya illinoinensis HOM05D000113 ORTHO05D002571 5.2e-34 148.7 208 51.0
Oeu008272.2 Olea europaea HOM05D000113 ORTHO05D002571 8.8e-34 147.9 204 44.6
Glyma.06G201700 Glycine max HOM05D000113 ORTHO05D002571 1.5e-33 147.1 208 46.2
Prupe.6G159800 Prunus persica HOM05D000113 ORTHO05D002571 1.5e-33 147.1 211 48.3
RcHm_v2.0_Chr2g0092491 Rosa chinensis HOM05D000113 ORTHO05D002571 2.0e-33 146.7 213 48.8
RcHm_v2.0_Chr7g0182681 Rosa chinensis HOM05D000113 ORTHO05D002571 2.0e-33 146.7 102 71.6
Thhalv10017881m.g Eutrema salsugineum HOM05D000113 ORTHO05D002571 2.6e-33 146.4 207 46.4
Aa31LG7G3740 Aethionema arabicum HOM05D000113 ORTHO05D002571 3.4e-33 146.0 210 50.0
FAN18G0690 Fragaria x ananassa HOM05D000113 ORTHO05D002571 4.4e-33 145.6 208 46.6
Sed0009402 Sechium edule HOM05D000113 ORTHO05D002571 4.4e-33 145.6 210 48.6
Thhalv10006650m.g Eutrema salsugineum HOM05D000113 ORTHO05D002571 7.5e-33 144.8 206 49.0
FvH4_5g14240 Fragaria vesca HOM05D000113 ORTHO05D002571 1.7e-32 143.7 208 46.6
Aa31LG7G6920 Aethionema arabicum HOM05D000113 ORTHO05D002571 2.2e-32 143.3 206 45.6
vmacro16510 Vaccinium macrocarpon HOM05D000113 ORTHO05D002571 2.8e-32 142.9 207 47.8
FAN23G0734 Fragaria x ananassa HOM05D000113 ORTHO05D002571 4.9e-32 142.1 213 46.5
MELO3C017216.2 Cucumis melo HOM05D000113 ORTHO05D002571 6.3e-32 141.7 211 46.9
SGA_v2.0_scaffold1221G53867 Striga asiatica HOM05D000113 ORTHO05D012125 6.3e-32 141.7 207 42.5
FAN08G1023 Fragaria x ananassa HOM05D000113 ORTHO05D002571 8.3e-32 141.4 102 67.6
PGSC0003DMG402024649 Solanum tuberosum HOM05D000113 ORTHO05D002571 8.3e-32 141.4 211 47.4
Thecc.03G097900 Theobroma cacao HOM05D000113 ORTHO05D002571 8.3e-32 141.4 208 47.1
EL10Ac3g06248 Beta vulgaris HOM05D000113 ORTHO05D002571 1.4e-31 140.6 207 46.4
Nn2g13470 Nelumbo nucifera HOM05D000113 ORTHO05D002571 1.8e-31 140.2 191 49.7
Hma1.2p1_0060F.1_g033270 Hydrangea macrophylla HOM05D000113 ORTHO05D002571 5.4e-31 138.7 204 45.6
Sc10g0009750 Simmondsia chinensis HOM05D000113 ORTHO05D002571 2.0e-30 136.7 208 45.2
RhsimUnG0148700 Rhododendron simsii HOM05D000113 ORTHO05D002571 3.5e-30 136.0 207 47.3
Phvul.009G193400 Phaseolus vulgaris HOM05D000113 ORTHO05D002571 7.7e-30 134.8 102 66.7
PGSC0003DMG401024649 Solanum tuberosum HOM05D000113 ORTHO05D012125 1.7e-29 133.7 156 52.6
AL7G28140 Arabidopsis lyrata HOM05D000113 ORTHO05D002571 2.3e-29 133.3 206 42.7
AUR62029968 Chenopodium quinoa HOM05D000113 ORTHO05D012125 6.6e-29 131.7 131 58.0
Lj1g0013131 Lotus japonicus HOM05D000113 ORTHO05D002571 1.5e-28 130.6 152 53.9
Rhsim06G0025800 Rhododendron simsii HOM05D000113 ORTHO05D002571 1.5e-28 130.6 202 47.0
Solyc03g115400.2 Solanum lycopersicum HOM05D000113 ORTHO05D012125 3.3e-28 129.4 156 52.6
CAN.G479.26 Capsicum annuum HOM05D000113 ORTHO05D012125 4.3e-28 129.0 156 50.6
Cc04_g15030 Coffea canephora HOM05D000113 ORTHO05D012125 5.6e-28 128.6 152 48.0
Actinidia35027 Actinidia chinensis HOM05D000113 ORTHO05D002571 9.5e-28 127.9 206 44.2
Potri.015G008700 Populus trichocarpa HOM05D000113 ORTHO05D002571 1.6e-27 127.1 206 43.7
CsaV3_1G002800 Cucumis sativus L. HOM05D000113 ORTHO05D002571 2.1e-27 126.7 213 43.7
Medtr3g023880 Medicago truncatula HOM05D000113 ORTHO05D002571 3.6e-27 125.9 99 63.6
Migut.D01678 Erythranthe guttata HOM05D000113 ORTHO05D002571 4.7e-27 125.6 205 40.0
Rhsim12G0152100 Rhododendron simsii HOM05D000113 ORTHO05D002571 8.0e-27 124.8 204 42.6
ATR0064G016 Amborella trichopoda HOM05D000113 ORTHO05D002571 1.4e-26 124.0 102 58.8
DCAR_021511 Daucus carota HOM05D000113 ORTHO05D002571 1.4e-26 124.0 205 43.4
COL.COLO4_22215 Corchorus olitorius HOM05D000113 ORTHO05D002571 3.0e-26 122.9 208 42.8
Lj6g0016007 Lotus japonicus HOM05D000113 ORTHO05D002571 5.2e-26 122.1 208 41.8
MD02G1072500 Malus domestica HOM05D000113 ORTHO05D002571 6.8e-26 121.7 212 42.5
arahy.Tifrunner.gnm1.ann1.U2PNLV Arachis hypogaea HOM05D000113 ORTHO05D002571 8.9e-26 121.3 209 41.1
SalBow7G4123 Salvia bowleyana HOM05D000113 ORTHO05D002571 8.9e-26 121.3 204 42.2
CSS0000469 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D002571 1.2e-25 120.9 204 43.6
Lsat_1_v5_gn_6_69341 Lactuca sativa HOM05D000113 ORTHO05D002571 2.6e-25 119.8 204 43.6
MD08G1042900 Malus domestica HOM05D000113 ORTHO05D002571 4.4e-25 119.0 182 45.6
THA.LOC104812747 Tarenaya hassleriana HOM05D000113 ORTHO05D002571 5.7e-25 118.6 208 42.3
TPR.G12156 Trifolium pratense HOM05D000113 ORTHO05D002571 9.8e-25 117.9 208 41.3
ClCG06G015750 Citrullus lanatus HOM05D000113 ORTHO05D002571 1.3e-24 117.5 210 43.8
Aa31LG7G3630 Aethionema arabicum HOM05D000113 ORTHO05D002571 2.2e-24 116.7 141 48.9
MD06G1200100 Malus domestica HOM05D000113 ORTHO05D002571 2.2e-24 116.7 87 66.7
Psat0s3790g0040 Pisum sativum HOM05D000113 ORTHO05D002571 2.2e-24 116.7 208 41.3
CDE02G1559 Ceratophyllum demersum HOM05D000113 ORTHO05D002571 2.9e-24 116.3 211 38.4
Nitab4.5_0004284g0070 Nicotiana tabacum HOM05D000113 ORTHO05D002571 2.9e-24 116.3 204 42.6
SEGI_02990 Sequoiadendron giganteum HOM05D000113 ORTHO05D002571 8.3e-24 114.8 209 37.8
BcaC05g27851 Brassica carinata HOM05D000113 ORTHO05D002571 3.2e-23 112.8 206 39.3
C05p38490 Brassica napus HOM05D000113 ORTHO05D002571 3.2e-23 112.8 206 39.3
BolC5t32583H Brassica oleracea HOM05D000113 ORTHO05D002571 3.2e-23 112.8 206 39.3
A05p24800 Brassica napus HOM05D000113 ORTHO05D002571 5.4e-23 112.1 206 39.3
BraA05t21363Z Brassica rapa HOM05D000113 ORTHO05D002571 5.4e-23 112.1 206 39.3
Hund09854 Selenicereus undatus HOM05D000113 ORTHO05D012125 7.0e-23 111.7 211 40.8
BcaB03g13727 Brassica carinata HOM05D000113 ORTHO05D012125 1.2e-22 110.9 206 37.4
Lj5A105G62 Lonicera japonica HOM05D000113 ORTHO05D012125 7.8e-22 108.2 98 56.1
Dinv22270 Davidia involucrata HOM05D000113 ORTHO05D002571 1.0e-21 107.8 94 60.6
Aa31LG2G13460 Aethionema arabicum HOM05D000113 ORTHO05D002571 1.3e-21 107.5 210 39.0
FvH4_1g06760 Fragaria vesca HOM05D000113 ORTHO05D002571 1.3e-21 107.5 207 40.1
QL10p018794 Quercus lobata HOM05D000113 ORTHO05D002571 1.3e-21 107.5 104 65.4
AUR62002552 Chenopodium quinoa HOM05D000113 ORTHO05D002571 1.7e-21 107.1 192 39.6
DCAR_026352 Daucus carota HOM05D000113 ORTHO05D002571 6.6e-21 105.1 207 37.7
VMungo1127G1561 Vigna mungo HOM05D000113 ORTHO05D002571 1.1e-20 104.4 206 38.8
Ah.13g073050 Amaranthus hybridus HOM05D000113 ORTHO05D002571 1.9e-20 103.6 69 75.4
Ciclev10024265m.g Citrus clementina HOM05D000113 ORTHO05D012125 5.6e-20 102.1 92 59.8
Atru.chr12.1784 Acer truncatum HOM05D000113 ORTHO05D012125 1.4e-18 97.4 74 66.2
RcHm_v2.0_Chr2g0092541 Rosa chinensis HOM05D000113 ORTHO05D002571 2.3e-18 96.7 100 53.0
Aa31LG9G8960 Aethionema arabicum HOM05D000113 ORTHO05D002571 3.1e-18 96.3 78 60.3
FAN26G1966 Fragaria x ananassa HOM05D000113 ORTHO05D012125 1.5e-17 94.0 208 38.0
HanXRQChr10g0308651 Helianthus annuus HOM05D000113 ORTHO05D002571 2.6e-17 93.2 198 35.9
HanXRQChr12g0377671 Helianthus annuus HOM05D000113 ORTHO05D012125 2.6e-17 93.2 208 37.0
Mapoly0054s0103 Marchantia polymorpha HOM05D000113 ORTHO05D002571 2.6e-17 93.2 209 32.5
FAN26G0487 Fragaria x ananassa HOM05D000113 ORTHO05D012125 7.5e-17 91.7 208 37.5
Glyma.11G217750 Glycine max HOM05D000113 ORTHO05D012125 1.4e-15 87.4 121 48.8
Pp3c1_18490 Physcomitrium patens HOM05D000113 ORTHO05D002571 5.4e-15 85.5 101 40.6
FAN26G0107 Fragaria x ananassa HOM05D000113 ORTHO05D002571 7.0e-15 85.1 210 35.2
Lsat_1_v5_gn_9_24861 Lactuca sativa HOM05D000113 ORTHO05D002571 3.5e-14 82.8 163 39.9
HanXRQChr09g0270171 Helianthus annuus HOM05D000113 ORTHO05D002571 7.8e-14 81.6 193 36.8
SEGI_38837 Sequoiadendron giganteum HOM05D000113 ORTHO05D012125 1.3e-13 80.9 77 50.6
Ciclev10017694m.g Citrus clementina HOM05D000113 ORTHO05D012125 2.3e-13 80.1 76 56.6
FAN26G1920 Fragaria x ananassa HOM05D000113 ORTHO05D002571 2.3e-13 80.1 205 34.6
CSS0030678 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D002571 3.0e-13 79.7 185 36.8
SMO356G0256 Selaginella moellendorffii HOM05D000113 ORTHO05D002571 3.0e-13 79.7 101 43.6
Nitab4.5_0008517g0020 Nicotiana tabacum HOM05D000113 ORTHO05D002571 3.9e-13 79.3 103 48.5
FAN19G3029 Fragaria x ananassa HOM05D000113 ORTHO05D012125 8.6e-13 78.2 193 35.8
Nitab4.5_0001127g0130 Nicotiana tabacum HOM05D000113 ORTHO05D012125 1.1e-12 77.8 99 46.5
Prupe.6G014300 Prunus persica HOM05D000113 ORTHO05D012125 1.1e-12 77.8 58 65.5
QL93p0191_0033 Quercus lobata HOM05D000113 ORTHO05D002571 1.1e-12 77.8 74 66.2
Peaxi162Scf00201g00132 Petunia axillaris HOM05D000113 ORTHO05D002571 1.9e-12 77.0 174 36.8
FvH4_1g06770 Fragaria vesca HOM05D000113 ORTHO05D002571 2.5e-12 76.6 225 34.2
FAN19G0651 Fragaria x ananassa HOM05D000113 ORTHO05D002571 4.3e-12 75.9 225 35.1
Nitab4.5_0000219g0080 Nicotiana tabacum HOM05D000113 ORTHO05D002571 4.3e-12 75.9 102 48.0
Cfa004955 Carpinus fangiana HOM05D000113 ORTHO05D002571 5.6e-12 75.5 121 47.9
CBR_g24329 Chara braunii HOM05D000113 ORTHO05D002571 1.8e-10 70.5 97 39.2
TWI81G1049 Tripterygium wilfordii HOM05D000113 ORTHO05D002571 2.3e-10 70.1 143 41.3
Gohir.D04G183400 Gossypium hirsutum HOM05D000113 ORTHO05D002571 4.0e-10 69.3 90 44.4
Gohir.A04G140200 Gossypium hirsutum HOM05D000113 ORTHO05D002571 8.9e-10 68.2 66 51.5
Haze_02454 Corylus avellana HOM05D000113 ORTHO05D002571 1.5e-09 67.4 90 53.3
FAN23G0944 Fragaria x ananassa HOM05D000113 ORTHO05D002571 4.4e-09 65.9 189 33.9
Nitab4.5_0004622g0020 Nicotiana tabacum HOM05D000113 ORTHO05D002571 1.7e-08 63.9 57 59.6
Os05g0389800 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D002571 2.2e-08 63.5 85 41.2
Sabra15G0050000 Salix brachista HOM05D000113 ORTHO05D002571 3.7e-08 62.8 132 42.4
SHI27002 Sapria himalayana HOM05D000113 ORTHO05D012125 3.2e-07 59.7 168 33.9
Sabra15G0050400 Salix brachista HOM05D000113 ORTHO05D002571 4.1e-07 59.3 137 40.1
Lj5C105T19 Lonicera japonica HOM05D000113 ORTHO05D002571 7.1e-07 58.5 53 64.2
Carub.0004s1703 Capsella rubella HOM05D000113 ORTHO05D002571 7.8e-06 55.1 49 63.3


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