Gene: Nitab4.5_0001410g0130

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0001410g0130
  • Transcript Identifier Nitab4.5_0001410g0130.1
  • Gene Type Coding gene
  • Location Nitab4.5_0001410 : 393932-416662 : positive

Gene Family Information

  • ID HOM05D000113
  • #Genes/#Species 2932/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0001410g0130.1
  • SR1-identifier Nta05g32090.1

Descriptions

  • Description Helicase, superfamily 1/2, ATP-binding domain, PWI domain, Helicase, C-terminal, P-loop containing nucleoside triphosphate hydrolase, Helicase-associated domain, Domain of unknown function DUF1605, DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc03g115390.4
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT1G32490
GO:0035194
ISO
PLAZA Integrative Orthologypost-transcriptional gene silencing by RNA AT1G32490
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G35340

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
InterProhelicase activity
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000113
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc03g115390.4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G32490
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT1G32490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR007502 Helicase-associated domain
IPR011709 Domain of unknown function DUF1605
IPR001650 Helicase, C-terminal
Mapman id Description
16.2.7.1.5 RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Prp2)