Gene: FAN08G1023
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN08G1023
- Transcript Identifier FAN08G1023.1
- Gene Type Coding gene
- Location Fvb5-3 : 20175414-20187882 : negative
Gene Family Information
- ID HOM05D000113
- #Genes/#Species 2932/100
- Phylogenetic origin
- ID ORTHO05D002571
- #Genes/#Species 278/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id augustus_masked-Fvb5-3-processed-gene-201.13.v1.0.a1
- pacid 50460965
Descriptions
- Description PF00271//PF04408//PF07717//PF13855 - Helicase conserved C-terminal domain (Helicase_C) // Helicase associated domain (HA2) (HA2) // Oligonucleotide/oligosaccharide-binding (OB)-fold (OB_NTP_bind) // Leucine rich repeat (LRR_8)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004386 | IEA | InterPro | helicase activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005524 | ISO | PLAZA Homology (enrichment) | ATP binding | HOM05D000113 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007502 | Helicase-associated domain |
| IPR001611 | Leucine-rich repeat |
| IPR001650 | Helicase, C-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003591 | Leucine-rich repeat, typical subtype |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR032675 | Leucine-rich repeat domain superfamily |
| Mapman id | Description |
|---|---|
| 16.2.7.1.5 | RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Prp2) |