Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J02256 Eucalyptus grandis HOM05D006734 ORTHO05D008580 1.2e-106 389.8 199 100.0
Eucgr.J02259 Eucalyptus grandis HOM05D006734 ORTHO05D008580 8.7e-84 313.9 205 83.4
PGR083G0596 Punica granatum HOM05D006734 ORTHO05D008580 9.4e-54 214.2 209 62.7
Cpa.g.sc108.78 Carica papaya HOM05D006734 ORTHO05D008580 4.5e-48 195.3 208 56.2
Thhalv10013219m.g Eutrema salsugineum HOM05D006734 ORTHO05D008580 2.5e-46 189.5 214 56.1
COL.COLO4_29173 Corchorus olitorius HOM05D006734 ORTHO05D008580 9.4e-46 187.6 209 54.5
Potri.001G343100 Populus trichocarpa HOM05D006734 ORTHO05D008580 4.7e-45 185.3 219 52.1
BcaB08g36983 Brassica carinata HOM05D006734 ORTHO05D008580 8.0e-45 184.5 219 54.8
TAR622G1243 Trochodendron aralioides HOM05D006734 ORTHO05D008580 2.3e-44 183.0 217 52.5
AL6G25190 Arabidopsis lyrata HOM05D006734 ORTHO05D008580 3.0e-44 182.6 198 56.6
Manes.17G111000 Manihot esculenta HOM05D006734 ORTHO05D008580 6.7e-44 181.4 208 53.8
Thecc.04G019600 Theobroma cacao HOM05D006734 ORTHO05D008580 1.2e-43 180.6 209 53.1
Haze_14760 Corylus avellana HOM05D006734 ORTHO05D008580 1.5e-43 180.3 215 54.0
Aa31LG11G15240 Aethionema arabicum HOM05D006734 ORTHO05D008580 2.0e-43 179.9 217 54.4
CARHR198850 Cardamine hirsuta HOM05D006734 ORTHO05D008580 7.5e-43 177.9 218 53.2
DCAR_011261 Daucus carota HOM05D006734 ORTHO05D008580 7.5e-43 177.9 174 55.2
Sp6g29560 Schrenkiella parvula HOM05D006734 ORTHO05D008580 7.5e-43 177.9 205 55.6
A10p24100 Brassica napus HOM05D000631 ORTHO05D008580 9.7e-43 177.6 210 57.1
Carub.0006s1264 Capsella rubella HOM05D006734 ORTHO05D008580 9.7e-43 177.6 217 52.1
C09p62720 Brassica napus HOM05D006734 ORTHO05D008580 1.3e-42 177.2 210 55.7
BolC9t59109H Brassica oleracea HOM05D006734 ORTHO05D008580 1.7e-42 176.8 210 55.2
Cfa007337 Carpinus fangiana HOM05D006734 ORTHO05D008580 2.2e-42 176.4 215 53.0
TWI36G0664 Tripterygium wilfordii HOM05D006734 ORTHO05D008580 2.8e-42 176.0 213 51.6
BraA10t44473Z Brassica rapa HOM05D006734 ORTHO05D008580 8.2e-42 174.5 210 56.2
Sabra16G0222500 Salix brachista HOM05D006734 ORTHO05D008580 2.4e-41 172.9 210 50.0
CiPaw.04G029800 Carya illinoinensis HOM05D006734 ORTHO05D008580 3.1e-41 172.6 219 49.8
GSVIVG01032383001 Vitis vinifera HOM05D006734 ORTHO05D008580 4.1e-41 172.2 159 59.1
AT5G14460 Arabidopsis thaliana HOM05D006734 ORTHO05D008580 9.1e-41 171.0 216 51.9
Nitab4.5_0006683g0080 Nicotiana tabacum HOM05D006734 ORTHO05D008580 2.7e-40 169.5 217 49.8
Atru.chr6.2432 Acer truncatum HOM05D006734 ORTHO05D008580 4.5e-40 168.7 208 54.3
Ciclev10014883m.g Citrus clementina HOM05D006734 ORTHO05D008580 7.7e-40 167.9 210 51.0
Nitab4.5_0001562g0130 Nicotiana tabacum HOM05D006734 ORTHO05D008580 1.0e-39 167.5 217 49.3
Sed0017476 Sechium edule HOM05D006734 ORTHO05D008580 1.0e-39 167.5 179 53.1
QL02p073991 Quercus lobata HOM05D006734 ORTHO05D008580 1.7e-39 166.8 178 51.7
Hund24869 Selenicereus undatus HOM05D006734 ORTHO05D008580 2.9e-39 166.0 218 47.2
CANSAT64G2114 Cannabis sativa HOM05D006734 ORTHO05D008580 8.5e-39 164.5 184 53.8
Gohir.D04G058500 Gossypium hirsutum HOM05D006734 ORTHO05D008580 2.5e-38 162.9 207 48.3
Gorai.012G065200 Gossypium raimondii HOM05D006734 ORTHO05D008580 2.5e-38 162.9 207 48.3
Ah.03g137010 Amaranthus hybridus HOM05D006734 ORTHO05D008580 3.2e-38 162.5 181 51.4
Gohir.A05G354600 Gossypium hirsutum HOM05D006734 ORTHO05D008580 4.2e-38 162.2 207 48.8
Oeu054631.1 Olea europaea HOM05D006734 ORTHO05D008580 5.5e-38 161.8 183 51.9
Peaxi162Scf03028g00013 Petunia axillaris HOM05D006734 ORTHO05D008580 7.2e-38 161.4 218 49.1
MELO3C021593.2 Cucumis melo HOM05D006734 ORTHO05D008580 9.4e-38 161.0 200 51.5
arahy.Tifrunner.gnm1.ann1.7L5D5L Arachis hypogaea HOM05D006734 ORTHO05D008580 1.2e-37 160.6 227 49.3
PSO017G5381 Papaver somniferum HOM05D006734 ORTHO05D008580 1.2e-37 160.6 213 48.8
Lj7A601T102 Lonicera japonica HOM05D006734 ORTHO05D008580 1.6e-37 160.2 227 47.6
SHI03823 Sapria himalayana HOM05D006734 ORTHO05D008580 4.7e-37 158.7 184 51.1
CsaV3_5G027020 Cucumis sativus L. HOM05D006734 ORTHO05D008580 1.0e-36 157.5 229 47.2
Peaxi162Scf00129g01651 Petunia axillaris HOM05D006734 ORTHO05D008580 1.0e-36 157.5 209 50.2
Prupe.3G294000 Prunus persica HOM05D006734 ORTHO05D008580 1.0e-36 157.5 218 50.0
arahy.Tifrunner.gnm1.ann1.K7325H Arachis hypogaea HOM05D006734 ORTHO05D008580 1.8e-36 156.8 224 47.3
MSTRG.3137 Avicennia marina HOM05D006734 ORTHO05D008580 1.8e-36 156.8 222 47.3
ClCG09G019390 Citrullus lanatus HOM05D006734 ORTHO05D008580 1.8e-36 156.8 181 51.4
Lsat_1_v5_gn_4_184340 Lactuca sativa HOM05D006734 ORTHO05D008580 1.8e-36 156.8 224 46.0
Lj2g0015195 Lotus japonicus HOM05D006734 ORTHO05D008580 3.0e-36 156.0 221 50.2
PGSC0003DMG400012609 Solanum tuberosum HOM05D006734 ORTHO05D008580 3.0e-36 156.0 231 47.2
Sopen02g038210 Solanum pennellii HOM05D006734 ORTHO05D008580 4.0e-36 155.6 228 47.8
Aqoxy3G01241 Aquilegia oxysepala HOM05D006734 ORTHO05D008580 5.2e-36 155.2 228 46.1
Dinv25724 Davidia involucrata HOM05D006734 ORTHO05D008580 5.2e-36 155.2 226 46.9
Solyc02g093460.4 Solanum lycopersicum HOM05D006734 ORTHO05D008580 6.8e-36 154.8 228 47.8
Ca_04141_v3 Cicer arietinum L. HOM05D006734 ORTHO05D008580 1.5e-35 153.7 216 46.8
Lalb_Chr02g0160561 Lupinus albus HOM05D006734 ORTHO05D008580 1.5e-35 153.7 218 47.7
MD17G1022100 Malus domestica HOM05D006734 ORTHO05D008580 2.2e-34 149.8 220 48.2
SGA_v2.0_scaffold18G08271 Striga asiatica HOM05D006734 ORTHO05D008580 3.7e-34 149.1 227 44.9
Glyma.05G002300 Glycine max HOM05D006734 ORTHO05D008580 1.4e-33 147.1 176 49.4
AUR62041944 Chenopodium quinoa HOM05D006734 ORTHO05D008580 1.8e-33 146.7 226 45.1
FAN02G4451 Fragaria x ananassa HOM05D006734 ORTHO05D008580 1.8e-33 146.7 206 50.5
VMungo0464G0440 Vigna mungo HOM05D006734 ORTHO05D008580 4.1e-33 145.6 184 50.0
Phvul.004G004100 Phaseolus vulgaris HOM05D006734 ORTHO05D008580 7.0e-33 144.8 178 52.8
Actinidia36125 Actinidia chinensis HOM05D006734 ORTHO05D008580 1.2e-32 144.1 229 44.5
FAN05G5484 Fragaria x ananassa HOM05D006734 ORTHO05D008580 1.6e-32 143.7 175 50.9
SalBow1G2810 Salvia bowleyana HOM05D006734 ORTHO05D008580 5.9e-32 141.7 217 44.2
AUR62028417 Chenopodium quinoa HOM05D006734 ORTHO05D008580 1.0e-31 141.0 220 45.0
BcaC04g19033 Brassica carinata HOM05D006734 ORTHO05D008580 1.7e-31 140.2 119 64.7
FAN09G4334 Fragaria x ananassa HOM05D006734 ORTHO05D008580 1.7e-31 140.2 215 46.0
FAN14G0563 Fragaria x ananassa HOM05D006734 ORTHO05D008580 1.7e-31 140.2 215 46.0
FvH4_6g51780 Fragaria vesca HOM05D006734 ORTHO05D008580 5.0e-31 138.7 215 45.6
CDE09G1408 Ceratophyllum demersum HOM05D006734 ORTHO05D008580 1.9e-30 136.7 165 50.3
MBI15_g36475_MAGBIO Magnolia biondii HOM05D006734 ORTHO05D008580 1.9e-30 136.7 183 48.6
CAN.G473.21 Capsicum annuum HOM05D006734 ORTHO05D008580 4.7e-29 132.1 230 42.6
vmacro05878 Vaccinium macrocarpon HOM05D006734 ORTHO05D008580 4.7e-29 132.1 192 46.9
unitig_748.g6980 Utricularia gibba HOM05D006734 ORTHO05D008580 8.0e-29 131.3 221 43.9
Psat1g053400 Pisum sativum HOM05D006734 ORTHO05D008580 1.2e-27 127.5 210 45.2
EL10Ac6g14101 Beta vulgaris HOM05D006734 ORTHO05D008580 2.6e-27 126.3 239 39.7
Rhsim10G0014500 Rhododendron simsii HOM05D006734 ORTHO05D008580 1.3e-26 124.0 216 44.0
BcaB08g36998 Brassica carinata HOM05D006734 ORTHO05D008580 2.2e-26 123.2 91 70.3
Medtr6g004400 Medicago truncatula HOM05D006734 ORTHO05D008580 1.4e-25 120.6 184 44.6
TPR.G20888 Trifolium pratense HOM05D006734 ORTHO05D008580 2.4e-25 119.8 94 63.8
HPP92_004604 Vanilla planifolia HOM05D006734 ORTHO05D008580 1.2e-24 117.5 95 63.2
Sc07g0007780 Simmondsia chinensis HOM05D006734 ORTHO05D008580 1.6e-24 117.1 212 42.0
ATR0824G040 Amborella trichopoda HOM05D006734 ORTHO05D008580 4.5e-24 115.5 190 44.7
Migut.H00068 Erythranthe guttata HOM05D006734 ORTHO05D008580 6.1e-21 105.1 228 38.2
BcaB08g36996 Brassica carinata HOM05D006734 ORTHO05D008580 8.0e-21 104.8 170 48.8
Cc07_g00010 Coffea canephora HOM05D006734 ORTHO05D008580 6.8e-20 101.7 79 67.1
RcHm_v2.0_Chr2g0173311 Rosa chinensis HOM05D006734 ORTHO05D008580 1.5e-19 100.5 55 81.8
Zm00001eb267110 Zea mays HOM05D006734 ORTHO05D008580 3.7e-18 95.9 166 38.0
Os05g0108000 Oryza sativa ssp. japonica HOM05D006734 ORTHO05D008580 4.9e-18 95.5 166 39.8
SEGI_35368 Sequoiadendron giganteum HOM05D006734 ORTHO05D008580 1.8e-17 93.6 129 41.1
HanXRQChr09g0255301 Helianthus annuus HOM05D006734 ORTHO05D008580 6.0e-08 62.0 144 36.1


User provided reference genes

Program Settings