Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02343 Eucalyptus grandis HOM05D005767 ORTHO05D006785 3.9e-229 797.7 389 100.0
Manes.01G146000 Manihot esculenta HOM05D005767 ORTHO05D006785 2.3e-120 436.4 402 55.2
PGR119G2148 Punica granatum HOM05D005767 ORTHO05D006785 4.9e-115 418.7 392 56.1
TAR376G0924 Trochodendron aralioides HOM05D005767 ORTHO05D006785 3.5e-113 412.5 411 53.0
Thecc.01G018100 Theobroma cacao HOM05D005767 ORTHO05D006785 4.6e-113 412.1 399 53.4
QL06p032910 Quercus lobata HOM05D005767 ORTHO05D006785 1.7e-112 410.2 398 54.8
Cpa.g.sc6.256 Carica papaya HOM05D005767 ORTHO05D006785 3.9e-112 409.1 397 52.6
COL.COLO4_21902 Corchorus olitorius HOM05D005767 ORTHO05D006785 1.1e-111 407.5 398 53.5
Eucgr.I02344 Eucalyptus grandis HOM05D005767 ORTHO05D006785 4.3e-111 405.6 212 99.1
CSS0010624 Camellia sinensis var. sinensis HOM05D005767 ORTHO05D006785 1.3e-110 404.1 407 53.1
CiPaw.07G058900 Carya illinoinensis HOM05D005767 ORTHO05D006785 2.8e-110 402.9 384 53.9
Dinv33631 Davidia involucrata HOM05D005767 ORTHO05D006785 4.4e-108 395.6 405 52.6
Gohir.A11G175000 Gossypium hirsutum HOM05D005767 ORTHO05D006785 4.4e-108 395.6 422 49.8
Sabra07G0049300 Salix brachista HOM05D005767 ORTHO05D006785 5.8e-108 395.2 399 51.1
Haze_03760 Corylus avellana HOM05D005767 ORTHO05D006785 1.3e-107 394.0 479 45.5
Ciclev10025146m.g Citrus clementina HOM05D005767 ORTHO05D006785 1.7e-107 393.7 416 50.2
Gorai.007G194300 Gossypium raimondii HOM05D005767 ORTHO05D006785 3.8e-107 392.5 422 49.5
Potri.007G057400 Populus trichocarpa HOM05D005767 ORTHO05D006785 3.8e-107 392.5 400 51.2
Atru.chr3.804 Acer truncatum HOM05D005767 ORTHO05D006785 8.4e-107 391.3 405 51.4
Prupe.7G168600 Prunus persica HOM05D005767 ORTHO05D006785 1.1e-106 391.0 400 53.5
RcHm_v2.0_Chr2g0099381 Rosa chinensis HOM05D005767 ORTHO05D006785 1.4e-106 390.6 404 53.0
TWI73G0295 Tripterygium wilfordii HOM05D005767 ORTHO05D006785 1.4e-106 390.6 403 51.6
Gohir.D11G182500 Gossypium hirsutum HOM05D005767 ORTHO05D006785 2.4e-106 389.8 422 49.1
FvH4_1g11761 Fragaria vesca HOM05D005767 ORTHO05D006785 3.9e-104 382.5 407 52.1
FAN19G2575 Fragaria x ananassa HOM05D005767 ORTHO05D006785 5.1e-104 382.1 407 52.1
MELO3C007906.2 Cucumis melo HOM05D005767 ORTHO05D006785 6.6e-104 381.7 402 50.7
Duzib147G1641 Durio zibethinus HOM05D005767 ORTHO05D006785 7.3e-103 378.3 381 53.5
Nn1g05917 Nelumbo nucifera HOM05D005767 ORTHO05D006785 3.1e-101 372.9 414 48.1
VMungo0251G0680 Vigna mungo HOM05D005767 ORTHO05D006785 6.9e-101 371.7 405 52.6
Cc07_g10770 Coffea canephora HOM05D005767 ORTHO05D006785 1.2e-100 370.9 396 51.3
Sed0019779 Sechium edule HOM05D005767 ORTHO05D006785 2.6e-100 369.8 400 51.2
Sp7g33830 Schrenkiella parvula HOM05D005767 ORTHO05D006785 3.4e-100 369.4 389 51.9
CsaV3_6G047130 Cucumis sativus L. HOM05D005767 ORTHO05D006785 4.5e-100 369.0 402 50.0
MD02G1131900 Malus domestica HOM05D005767 ORTHO05D006785 5.8e-100 368.6 399 51.9
AT4G36050 Arabidopsis thaliana HOM05D005767 ORTHO05D006785 9.9e-100 367.9 396 49.7
Lj4g0015609 Lotus japonicus HOM05D005767 ORTHO05D006785 1.3e-99 367.5 402 51.5
Lj2C469G1 Lonicera japonica HOM05D005767 ORTHO05D006785 2.2e-99 366.7 390 51.5
Ca_22378_v3 Cicer arietinum L. HOM05D005767 ORTHO05D006785 1.1e-98 364.4 406 51.5
Sc16g0002260 Simmondsia chinensis HOM05D005767 ORTHO05D006785 2.7e-97 359.8 393 48.1
TPR.G27975 Trifolium pratense HOM05D005767 ORTHO05D006785 1.0e-96 357.8 401 50.1
arahy.Tifrunner.gnm1.ann1.12F6XV Arachis hypogaea HOM05D005767 ORTHO05D006785 5.1e-96 355.5 402 49.0
Oeu035312.2 Olea europaea HOM05D005767 ORTHO05D006785 5.1e-96 355.5 399 48.6
arahy.Tifrunner.gnm1.ann1.G0D851 Arachis hypogaea HOM05D005767 ORTHO05D006785 8.7e-96 354.8 402 49.0
Medtr8g075810 Medicago truncatula HOM05D005767 ORTHO05D006785 1.1e-95 354.4 410 50.2
PSO541G2118 Papaver somniferum HOM05D005767 ORTHO05D006785 1.1e-95 354.4 394 46.4
Carub.0007s0418 Capsella rubella HOM05D005767 ORTHO05D006785 5.6e-95 352.1 397 47.9
Thhalv10024709m.g Eutrema salsugineum HOM05D005767 ORTHO05D006785 2.8e-94 349.7 392 48.0
AUR62003364 Chenopodium quinoa HOM05D005767 ORTHO05D006785 3.7e-94 349.4 397 47.4
Rhsim10G0211700 Rhododendron simsii HOM05D005767 ORTHO05D006785 2.4e-93 346.7 371 49.9
CAN.G1735.5 Capsicum annuum HOM05D005767 ORTHO05D006785 3.1e-93 346.3 393 48.3
HanXRQChr09g0256711 Helianthus annuus HOM05D005767 ORTHO05D006785 6.9e-93 345.1 390 47.7
MSTRG.23406 Avicennia marina HOM05D005767 ORTHO05D006785 2.0e-92 343.6 397 46.6
Lsat_1_v5_gn_4_144841 Lactuca sativa HOM05D005767 ORTHO05D006785 2.0e-92 343.6 390 47.9
Psat4g100320 Pisum sativum HOM05D005767 ORTHO05D006785 2.6e-92 343.2 394 49.7
AL7G15000 Arabidopsis lyrata HOM05D005767 ORTHO05D006785 3.4e-92 342.8 395 46.8
Migut.N01741 Erythranthe guttata HOM05D005767 ORTHO05D006785 5.8e-92 342.0 393 47.1
Nitab4.5_0006119g0040 Nicotiana tabacum HOM05D005767 ORTHO05D006785 5.8e-92 342.0 390 47.4
ECA232G4495 Erigeron canadensis HOM05D005767 ORTHO05D006785 1.0e-91 341.3 387 47.5
SGA_v2.0_scaffold76G25121 Striga asiatica HOM05D005767 ORTHO05D006785 3.8e-91 339.3 405 47.2
vmacro22135 Vaccinium macrocarpon HOM05D005767 ORTHO05D006785 4.9e-91 339.0 394 47.7
Phvul.003G261600 Phaseolus vulgaris HOM05D005767 ORTHO05D006785 6.5e-91 338.6 387 51.7
ClCG01G020330 Citrullus lanatus HOM05D005767 ORTHO05D006785 1.4e-90 337.4 458 43.4
Nitab4.5_0000438g0060 Nicotiana tabacum HOM05D005767 ORTHO05D006785 1.4e-90 337.4 396 47.7
DCAR_026000 Daucus carota HOM05D005767 ORTHO05D006785 3.2e-90 336.3 402 46.5
Aa31LG6G13010 Aethionema arabicum HOM05D005767 ORTHO05D006785 4.2e-90 335.9 387 48.1
unitig_32.g10945 Utricularia gibba HOM05D005767 ORTHO05D006785 4.2e-90 335.9 388 46.9
Lalb_Chr05g0229851 Lupinus albus HOM05D005767 ORTHO05D006785 1.8e-88 330.5 380 49.5
C01p02980 Brassica napus HOM05D005767 ORTHO05D006785 3.9e-88 329.3 385 46.2
Sopen03g006310 Solanum pennellii HOM05D005767 ORTHO05D006785 7.4e-87 325.1 389 46.3
Ah.03g148810 Amaranthus hybridus HOM05D005767 ORTHO05D006785 4.8e-86 322.4 395 45.3
Peaxi162Scf00050g00215 Petunia axillaris HOM05D005767 ORTHO05D006785 4.8e-86 322.4 390 47.4
Hund16493 Selenicereus undatus HOM05D005767 ORTHO05D006785 1.0e-83 314.7 384 44.5
AUR62029469 Chenopodium quinoa HOM05D005767 ORTHO05D006785 3.2e-82 309.7 368 46.2
Aqoxy6G02211 Aquilegia oxysepala HOM05D005767 ORTHO05D006785 9.3e-82 308.1 394 44.4
Glyma.02G048200 Glycine max HOM05D005767 ORTHO05D006785 1.0e-80 304.7 412 44.7
MBI09_g09407_MAGBIO Magnolia biondii HOM05D005767 ORTHO05D006785 1.0e-80 304.7 409 44.5
FAN26G3405 Fragaria x ananassa HOM05D005767 ORTHO05D006785 6.7e-80 302.0 364 48.9
SHI08521 Sapria himalayana HOM05D000565 ORTHO05D002009 1.5e-79 300.8 373 45.8
ATR0810G226 Amborella trichopoda HOM05D005767 ORTHO05D006785 3.3e-79 299.7 405 43.7
BcaNung00769 Brassica carinata HOM05D005767 ORTHO05D006785 7.4e-79 298.5 386 43.3
Solyc03g033530.4 Solanum lycopersicum HOM05D005767 ORTHO05D006785 4.1e-77 292.7 369 46.1
HPP92_005447 Vanilla planifolia HOM05D005767 ORTHO05D006785 1.2e-76 291.2 419 42.2
BraA01t00254Z Brassica rapa HOM05D005767 ORTHO05D006785 3.4e-76 289.7 367 45.2
BolC1t00284H Brassica oleracea HOM05D005767 ORTHO05D006785 7.7e-76 288.5 415 39.8
CDE04G0100 Ceratophyllum demersum HOM05D005767 ORTHO05D006785 9.4e-74 281.6 391 41.9
A01p02680 Brassica napus HOM05D005767 ORTHO05D006785 2.7e-73 280.0 366 42.6
Os09g0536000 Oryza sativa ssp. japonica HOM05D005767 ORTHO05D006785 2.2e-67 260.4 410 38.5
Actinidia22973 Actinidia chinensis HOM05D005767 ORTHO05D006785 9.4e-66 255.0 329 46.5
GSVIVG01018776001 Vitis vinifera HOM05D005767 ORTHO05D006785 5.1e-64 249.2 168 66.7
FAN26G2808 Fragaria x ananassa HOM05D005767 ORTHO05D006785 2.0e-60 237.3 215 54.9
AagrBONN_evm.TU.Sc2ySwM_344.3375 Anthoceros agrestis HOM05D005767 ORTHO05D006785 5.9e-60 235.7 410 38.8
Mapoly0107s0007 Marchantia polymorpha HOM05D005767 ORTHO05D006785 3.2e-58 229.9 416 36.1
Hma1.2p1_1115F.1_g258820 Hydrangea macrophylla HOM05D005767 ORTHO05D006785 5.5e-58 229.2 154 64.3
Pp3c17_13320 Physcomitrium patens HOM05D005767 ORTHO05D006785 1.4e-53 214.5 400 34.5
Potri.005G113301 Populus trichocarpa HOM05D005767 ORTHO05D006785 2.3e-40 170.6 107 66.4
SMO356G0595 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 5.2e-40 169.5 375 31.7
CARHR244450 Cardamine hirsuta HOM05D005767 ORTHO05D006785 6.6e-35 152.5 281 36.7
GSVIVG01018775001 Vitis vinifera HOM05D005767 ORTHO05D006785 9.5e-34 148.7 107 66.4
MD15G1244800 Malus domestica HOM05D005767 ORTHO05D006785 1.1e-26 125.2 248 40.3
CBR_g18710 Chara braunii HOM05D005767 ORTHO05D006785 3.3e-26 123.6 169 40.8
SEGI_12703 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 3.4e-23 113.6 86 54.7
SMO290G0007 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 6.4e-22 109.4 111 45.9
SMO356G0427 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 5.0e-19 99.8 375 27.5
SMO356G0296 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 3.3e-18 97.1 350 28.9
MD15G1244900 Malus domestica HOM05D005767 ORTHO05D006785 1.8e-16 91.3 81 50.6
SEGI_27797 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 4.1e-13 80.1 97 50.5
Lsat_1_v5_gn_9_7060 Lactuca sativa HOM05D005767 ORTHO05D006785 3.0e-11 73.9 60 51.7
MCO06G208 Micromonas commoda HOM05D005767 ORTHO05D006785 4.0e-08 63.5 60 46.7
Cre12.g532750 Chlamydomonas reinhardtii HOM05D005767 ORTHO05D006785 6.8e-08 62.8 41 65.9
MCO08G331 Micromonas commoda HOM05D005767 ORTHO05D006785 2.0e-07 61.2 112 31.2
Potri.005G113250 Populus trichocarpa HOM05D005767 ORTHO05D006785 9.9e-07 58.9 32 71.9
arahy.Tifrunner.gnm1.ann1.S1GY7D Arachis hypogaea HOM05D005767 ORTHO05D006785 8.4e-06 55.8 48 60.4


User provided reference genes

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