Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 3.2e-210 734.9 404 100.0
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 2.7e-148 529.3 394 70.8
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 4.6e-148 528.5 382 77.7
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.3e-147 526.9 392 71.9
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 1.7e-147 526.6 385 76.1
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 3.6e-145 518.8 387 76.0
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 6.2e-145 518.1 400 75.5
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.4e-144 516.9 396 70.2
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.4e-144 516.9 396 70.2
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 1.4e-144 516.9 396 69.9
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.2e-143 513.8 396 69.9
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 4.4e-143 511.9 396 69.9
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.2e-142 509.6 399 73.2
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.2e-142 509.6 400 74.2
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 3.7e-142 508.8 391 69.6
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 1.1e-141 507.3 399 71.4
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 3.2e-141 505.8 392 69.9
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 2.1e-140 503.1 388 70.6
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 3.0e-139 499.2 379 72.3
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 5.1e-139 498.4 396 68.4
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 2.5e-138 496.1 381 71.9
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 2.5e-138 496.1 385 70.4
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 1.6e-137 493.4 387 72.6
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 8.1e-137 491.1 370 74.6
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 1.1e-136 490.7 395 67.8
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 1.4e-136 490.3 392 73.7
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 2.4e-136 489.6 388 72.9
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 3.1e-136 489.2 402 72.1
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 5.2e-136 488.4 391 67.8
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 5.2e-136 488.4 382 72.3
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 5.2e-136 488.4 395 69.4
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 8.9e-136 487.6 403 66.0
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 2.0e-135 486.5 397 66.5
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 2.6e-135 486.1 393 71.2
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 4.4e-135 485.3 374 75.4
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 5.8e-135 485.0 410 66.6
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 2.2e-134 483.0 396 65.4
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 2.2e-134 483.0 407 71.0
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 6.4e-134 481.5 397 71.3
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 1.1e-133 480.7 394 66.8
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 1.1e-133 480.7 411 65.9
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 5.4e-133 478.4 370 74.9
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 2.3e-131 473.0 370 70.3
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 2.3e-131 473.0 399 68.9
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 3.9e-131 472.2 395 66.8
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.5e-130 470.3 405 63.5
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 2.5e-130 469.5 391 68.0
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 7.3e-130 468.0 403 66.0
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 1.2e-129 467.2 453 61.6
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 1.6e-129 466.8 377 68.7
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 3.6e-129 465.7 383 64.8
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 1.8e-128 463.4 393 67.7
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 5.2e-128 461.8 410 64.9
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 5.2e-128 461.8 410 64.9
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 6.9e-128 461.5 383 68.7
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 1.5e-127 460.3 394 63.7
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 1.3e-126 457.2 378 68.0
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 1.7e-126 456.8 386 64.8
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 2.2e-126 456.4 401 64.6
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 3.8e-126 455.7 393 66.7
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 4.9e-126 455.3 382 67.5
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 6.4e-126 454.9 408 62.7
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 6.4e-126 454.9 408 62.7
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 6.4e-126 454.9 384 65.6
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 6.4e-126 454.9 439 59.5
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.4e-125 453.0 396 64.4
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 5.4e-125 451.8 380 66.1
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 7.1e-125 451.4 376 71.5
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 2.1e-124 449.9 408 62.3
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 4.6e-124 448.7 277 79.8
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 1.3e-123 447.2 379 62.0
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 8.7e-123 444.5 420 61.2
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 3.3e-122 442.6 388 68.0
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 5.6e-122 441.8 400 60.0
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 7.3e-122 441.4 323 71.2
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 1.3e-121 440.7 399 64.2
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 4.0e-120 435.6 377 61.8
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 6.9e-120 434.9 283 77.0
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 8.4e-118 427.9 297 74.4
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 2.1e-116 423.3 387 60.5
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 6.0e-116 421.8 408 59.8
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 3.9e-115 419.1 407 63.1
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 3.3e-114 416.0 256 82.0
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 6.2e-113 411.8 291 78.4
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 8.1e-113 411.4 325 67.7
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 9.9e-111 404.4 373 63.8
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 2.9e-110 402.9 374 65.8
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 4.9e-110 402.1 420 55.2
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 6.4e-110 401.7 270 73.7
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 1.1e-109 401.0 296 72.0
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 1.6e-108 397.1 300 70.3
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 2.1e-108 396.7 297 70.4
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 4.6e-108 395.6 282 76.2
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 2.6e-103 379.8 288 67.4
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 9.0e-96 354.8 400 50.0
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.5e-95 354.0 249 73.9
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 5.0e-94 349.0 279 70.6
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 2.1e-92 343.6 344 61.0
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 1.4e-91 340.9 215 77.2
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 1.8e-91 340.5 246 74.0
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 2.5e-90 336.7 413 53.8
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.5e-87 327.4 370 54.1
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 2.0e-87 327.0 417 50.1
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.3e-86 324.3 308 59.7
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 5.0e-86 322.4 305 56.4
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.0e-83 314.7 199 78.9
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 2.0e-82 310.5 254 66.9
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.5e-69 266.9 221 66.5
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 2.1e-68 263.8 159 79.9
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 4.4e-66 256.1 261 56.7
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 2.7e-63 246.9 270 50.4
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 4.5e-63 246.1 306 52.0
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 2.9e-62 243.4 229 52.8
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 5.2e-43 179.5 304 34.2
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 3.2e-40 170.2 181 45.3
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 7.0e-32 142.5 209 38.3
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 1.0e-30 138.7 164 53.7
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.1e-29 135.2 159 51.6
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 1.4e-19 101.7 84 66.7
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 6.0e-15 86.3 101 51.5
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 6.2e-12 76.3 164 32.9
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.4e-11 75.1 127 40.9
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 2.4e-08 64.3 34 82.4
Atru.chr11.1544 Acer truncatum HOM05D006305 ORTHO05D007984 3.2e-08 63.9 70 58.6


User provided reference genes

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