Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 5.3e-229 797.3 406 100.0
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 3.0e-139 499.2 391 66.5
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 5.1e-139 498.4 362 69.3
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 3.3e-138 495.7 365 68.2
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 4.3e-138 495.4 316 74.4
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 9.6e-138 494.2 371 68.2
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 1.3e-137 493.8 369 68.3
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 1.3e-137 493.8 316 74.1
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 1.6e-137 493.4 364 67.9
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.1e-137 493.0 320 73.4
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 2.8e-137 492.7 316 73.7
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 3.6e-137 492.3 317 74.8
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 3.6e-137 492.3 312 75.3
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 6.2e-137 491.5 333 73.9
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 4.0e-136 488.8 308 76.9
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 4.0e-136 488.8 312 74.7
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 5.3e-136 488.4 368 65.8
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 5.3e-136 488.4 385 66.2
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 6.9e-136 488.0 317 74.1
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 1.2e-135 487.3 368 65.8
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 5.8e-135 485.0 305 78.0
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 7.6e-135 484.6 316 72.8
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 7.6e-135 484.6 314 76.4
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 1.3e-134 483.8 324 74.1
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 4.9e-134 481.9 395 65.6
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 1.1e-133 480.7 316 73.1
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 1.9e-133 479.9 319 74.0
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 5.4e-133 478.4 348 67.5
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 5.4e-133 478.4 325 72.9
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 1.2e-132 477.2 330 69.7
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 6.0e-132 474.9 309 76.4
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 1.3e-131 473.8 346 67.6
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 1.8e-131 473.4 319 71.2
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 3.0e-131 472.6 370 65.1
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 3.0e-131 472.6 320 71.9
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 1.9e-130 469.9 351 66.1
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 1.9e-130 469.9 319 68.7
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 2.5e-130 469.5 371 63.6
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 7.4e-130 468.0 369 64.8
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 7.4e-130 468.0 312 72.8
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 9.6e-130 467.6 320 70.9
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 9.6e-130 467.6 325 68.9
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 9.6e-130 467.6 372 63.4
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 1.3e-129 467.2 319 70.5
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 1.3e-129 467.2 362 65.5
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 4.8e-129 465.3 338 67.2
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 1.4e-128 463.8 320 70.6
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 3.1e-128 462.6 306 73.2
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 4.0e-128 462.2 370 63.0
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 5.3e-128 461.8 318 70.4
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 5.3e-128 461.8 317 69.1
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 5.3e-128 461.8 365 64.7
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 9.0e-128 461.1 312 72.1
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 9.0e-128 461.1 322 70.2
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 2.0e-127 459.9 321 70.7
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 3.4e-127 459.1 316 70.6
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 5.8e-127 458.4 306 72.9
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 7.6e-127 458.0 307 72.3
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 7.6e-127 458.0 307 72.3
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 7.6e-127 458.0 368 63.3
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 2.2e-126 456.4 323 70.6
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 6.4e-126 454.9 307 73.0
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 6.4e-126 454.9 363 64.7
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 8.4e-126 454.5 307 71.3
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 8.4e-126 454.5 373 61.9
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 1.1e-125 454.1 372 62.1
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 1.1e-125 454.1 314 68.8
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 2.4e-125 453.0 360 64.2
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 3.2e-125 452.6 310 71.6
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 4.2e-125 452.2 419 59.4
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 9.3e-125 451.1 313 71.6
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 9.3e-125 451.1 367 63.5
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 1.6e-124 450.3 322 70.2
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 3.5e-124 449.1 308 70.8
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 1.3e-123 447.2 317 66.9
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 5.1e-123 445.3 303 67.7
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 4.3e-122 442.2 353 63.2
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 2.1e-121 439.9 346 63.6
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 3.4e-119 432.6 313 68.7
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 2.1e-116 423.3 320 66.9
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 8.2e-113 411.4 312 63.5
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 6.9e-112 408.3 312 65.1
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 1.1e-109 401.0 279 72.4
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 3.6e-108 396.0 362 56.9
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 2.3e-107 393.3 315 62.2
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 1.3e-105 387.5 250 71.6
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 3.1e-104 382.9 316 60.1
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 3.1e-104 382.9 316 60.1
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 5.3e-104 382.1 250 73.6
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 8.5e-102 374.8 300 64.3
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 7.2e-101 371.7 316 58.2
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 1.6e-100 370.5 315 59.4
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 1.5e-98 364.0 252 69.8
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 3.3e-98 362.8 331 54.4
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 5.7e-98 362.1 325 55.1
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 7.0e-96 355.1 311 59.2
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 1.0e-94 351.3 234 72.6
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 2.7e-92 343.2 309 55.0
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 2.9e-86 323.2 359 51.8
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 5.0e-78 295.8 345 49.9
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 1.1e-77 294.7 180 78.3
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 5.4e-72 275.8 163 81.0
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 1.2e-71 274.6 172 77.9
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 1.0e-70 271.6 171 74.9
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 2.3e-67 260.4 422 38.4
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 8.9e-67 258.5 250 56.8
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 8.3e-65 251.9 364 40.9
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 2.9e-62 243.4 168 71.4
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 7.0e-56 222.2 127 81.9
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 9.8e-50 201.8 216 53.2
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 9.5e-37 158.7 137 58.4
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 8.7e-30 135.6 96 70.8
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 7.6e-26 122.5 324 30.9
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 1.2e-18 98.6 57 80.7
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 2.6e-18 97.4 217 33.6
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 5.4e-16 89.7 51 78.4
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 1.2e-10 72.0 192 29.7
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 2.0e-10 71.2 157 29.3


User provided reference genes

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