Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01076 Eucalyptus grandis HOM05D005363 ORTHO05D006607 7.0e-277 956.8 548 100.0
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 1.6e-196 689.9 550 70.5
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 1.3e-193 680.2 553 71.8
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 1.5e-189 666.8 552 69.7
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 1.9e-189 666.4 602 64.8
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 1.4e-187 660.2 549 67.9
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 4.0e-187 658.7 553 70.3
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 8.8e-187 657.5 555 69.0
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 1.4e-184 650.2 552 67.8
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 1.8e-184 649.8 554 67.5
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 1.6e-183 646.7 550 71.5
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 2.0e-183 646.4 552 69.9
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 2.9e-182 642.5 543 69.4
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 1.9e-181 639.8 553 68.5
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 3.0e-179 632.5 517 69.4
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 8.9e-179 630.9 568 68.3
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 2.8e-177 625.9 548 67.0
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 5.4e-176 621.7 557 65.7
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 9.2e-176 620.9 553 66.7
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 1.6e-175 620.2 549 65.8
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 5.9e-175 618.2 554 66.8
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 5.9e-175 618.2 552 65.0
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 7.8e-175 617.8 549 66.3
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 3.9e-174 615.5 550 66.2
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.1e-173 614.0 550 66.0
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 2.8e-172 609.4 549 65.6
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 1.0e-171 607.4 550 65.1
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 3.1e-171 605.9 549 64.5
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 5.2e-171 605.1 555 65.9
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 5.2e-171 605.1 549 65.4
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 2.0e-170 603.2 551 65.0
PSO832G2870 Papaver somniferum HOM05D005363 ORTHO05D006607 4.9e-169 598.6 555 63.6
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 8.3e-169 597.8 548 63.7
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.1e-168 597.4 556 62.9
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 1.9e-168 596.7 548 63.7
FAN11G3021 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.2e-167 594.0 548 66.6
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 1.2e-167 594.0 550 64.0
PSO210G7030 Papaver somniferum HOM05D005363 ORTHO05D006607 2.0e-167 593.2 555 62.9
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 6.0e-167 591.7 554 64.6
Medtr2g081100 Medicago truncatula HOM05D005363 ORTHO05D006607 1.0e-166 590.9 515 65.0
FvH4_3g21040 Fragaria vesca HOM05D005363 ORTHO05D006607 1.7e-166 590.1 548 66.2
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 5.0e-166 588.6 510 67.1
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 6.6e-166 588.2 557 65.7
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.1e-165 587.4 557 63.4
HPP92_026534 Vanilla planifolia HOM05D005363 ORTHO05D006607 1.6e-164 583.6 551 58.4
Aa31LG3G10220 Aethionema arabicum HOM05D005363 ORTHO05D006607 3.6e-164 582.4 550 64.2
FAN25G3415 Fragaria x ananassa HOM05D005363 ORTHO05D006607 3.6e-164 582.4 549 68.5
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 3.6e-164 582.4 574 61.5
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 1.1e-163 580.9 619 59.8
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 2.3e-163 579.7 545 65.3
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 2.3e-163 579.7 551 61.0
Aqoxy1G03881 Aquilegia oxysepala HOM05D005363 ORTHO05D006607 5.2e-163 578.6 555 62.3
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 6.8e-163 578.2 542 65.5
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 3.4e-162 575.9 549 62.1
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 2.9e-161 572.8 580 60.7
HPP92_026561 Vanilla planifolia HOM05D005363 ORTHO05D006607 6.4e-161 571.6 520 61.0
CARHR267540 Cardamine hirsuta HOM05D005363 ORTHO05D006607 8.3e-161 571.2 560 62.7
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 1.1e-160 570.9 551 62.8
Carub.0008s1460 Capsella rubella HOM05D005363 ORTHO05D006607 9.2e-160 567.8 424 73.6
Sp6g16300 Schrenkiella parvula HOM05D005363 ORTHO05D006607 2.1e-159 566.6 424 73.3
AT5G54260 Arabidopsis thaliana HOM05D005363 ORTHO05D006607 2.7e-159 566.2 557 63.6
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 4.6e-159 565.5 551 62.8
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 6.0e-159 565.1 555 62.3
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 2.3e-158 563.1 492 65.9
ATR0693G020 Amborella trichopoda HOM05D005363 ORTHO05D006607 6.6e-158 561.6 550 58.7
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 1.5e-157 560.5 556 61.3
Thhalv10012804m.g Eutrema salsugineum HOM05D005363 ORTHO05D006607 2.5e-157 559.7 562 63.0
TPR.G32857 Trifolium pratense HOM05D005363 ORTHO05D006607 1.6e-156 557.0 424 71.5
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 3.6e-156 555.8 565 60.4
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 4.7e-156 555.4 492 65.2
BcaC04g20356 Brassica carinata HOM05D005363 ORTHO05D006607 8.1e-156 554.7 424 72.4
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 3.1e-155 552.7 587 57.8
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 5.2e-155 552.0 488 65.8
ClCG11G018480 Citrullus lanatus HOM05D005363 ORTHO05D006607 1.2e-154 550.8 540 61.3
BcaB08g35781 Brassica carinata HOM05D005363 ORTHO05D006607 1.7e-153 547.0 424 70.8
A10p11550 Brassica napus HOM05D005363 ORTHO05D006607 2.9e-153 546.2 427 71.7
C09p44570 Brassica napus HOM05D005363 ORTHO05D006607 2.9e-153 546.2 427 71.7
BraA10t43250Z Brassica rapa HOM05D005363 ORTHO05D006607 2.9e-153 546.2 427 71.2
BolC9t57330H Brassica oleracea HOM05D005363 ORTHO05D006607 3.7e-153 545.8 427 71.2
Sopen09g004090 Solanum pennellii HOM05D005363 ORTHO05D006607 1.4e-152 543.9 399 72.2
Os04g0635900 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 4.1e-152 542.3 550 56.9
SHI33827 Sapria himalayana HOM05D005363 ORTHO05D006607 1.2e-151 540.8 555 56.4
Zm00001eb069270 Zea mays HOM05D005363 ORTHO05D006607 1.6e-151 540.4 555 58.9
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 6.0e-151 538.5 539 59.9
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 3.9e-150 535.8 549 61.2
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 5.1e-150 535.4 540 59.6
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 1.5e-149 533.9 525 57.5
THA.LOC104813315 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 1.5e-149 533.9 331 81.3
RhsimUnG0258300 Rhododendron simsii HOM05D005363 ORTHO05D006607 8.1e-148 528.1 490 60.4
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 2.0e-146 523.5 557 61.0
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 2.0e-146 523.5 542 60.7
Cc06_g05460 Coffea canephora HOM05D005363 ORTHO05D006607 3.5e-143 512.7 323 79.3
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 1.4e-139 500.7 561 55.8
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 4.5e-130 469.2 309 75.7
Eucgr.C01186 Eucalyptus grandis HOM05D005363 ORTHO05D006607 1.0e-126 458.0 362 78.7
AUR62029306 Chenopodium quinoa HOM05D005363 ORTHO05D006607 2.5e-125 453.4 627 47.0
AUR62015595 Chenopodium quinoa HOM05D005363 ORTHO05D006607 9.6e-125 451.4 417 60.0
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 3.7e-124 449.5 550 54.2
FAN16G0276 Fragaria x ananassa HOM05D005363 ORTHO05D006607 4.6e-119 432.6 547 57.8
Mapoly0023s0117 Marchantia polymorpha HOM05D005363 ORTHO05D006607 2.1e-111 407.1 535 46.9
Pp3c24_2350 Physcomitrium patens HOM05D005363 ORTHO05D006607 7.4e-109 398.7 428 51.6
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis HOM05D005363 ORTHO05D006607 6.5e-105 385.6 570 45.1
SMO347G0170 Selaginella moellendorffii HOM05D005363 ORTHO05D006607 1.6e-103 380.9 323 59.4
Atru.chr2.2912 Acer truncatum HOM05D005363 ORTHO05D006607 1.3e-100 371.3 377 63.1
SEGI_22122 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 2.2e-89 334.0 227 68.3
Zm00001eb171920 Zea mays HOM05D005363 ORTHO05D006607 6.5e-89 332.4 294 56.1
CDE12G0672 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 2.2e-84 317.4 227 68.7
Ca_01813_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 5.5e-80 302.8 188 77.7
Os08g0177600 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 3.6e-79 300.1 335 46.9
CBR_g48040 Chara braunii HOM05D005363 ORTHO05D006607 9.8e-77 292.0 369 42.3
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 7.7e-74 282.3 377 53.1
Atru.chr2.2913 Acer truncatum HOM05D005363 ORTHO05D006607 7.5e-69 265.8 162 77.8
MBI09_g27609_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 5.9e-66 256.1 176 69.3
unitig_13.g31430 Utricularia gibba HOM05D005363 ORTHO05D006607 3.0e-57 227.3 270 52.6
Cre12.g556911 Chlamydomonas reinhardtii HOM05D005363 ORTHO05D006607 1.4e-51 208.4 370 37.0
CDE12G0487 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 2.7e-50 204.1 313 44.1
MCO13G379 Micromonas commoda HOM05D005363 ORTHO05D006607 5.0e-49 199.9 376 35.1
CAN.G397.4 Capsicum annuum HOM05D005363 ORTHO05D006607 6.2e-47 193.0 203 52.2
PRCOL_00003292 Prasinoderma coloniale HOM05D005363 ORTHO05D006607 3.7e-44 183.7 327 38.2
Cfa025591 Carpinus fangiana HOM05D005363 ORTHO05D006607 6.6e-41 172.9 331 32.0
Ca_01800_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 1.2e-34 152.1 244 47.5
Ca_30473_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 3.5e-34 150.6 243 47.3
GSVIVG01001519001 Vitis vinifera HOM05D005363 ORTHO05D006607 2.1e-31 141.4 96 78.1
SEGI_35588 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 1.1e-30 139.0 298 41.9
CDE12G0011 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 6.6e-25 119.8 76 80.3
arahy.Tifrunner.gnm1.ann1.Q8WXS4 Arachis hypogaea HOM05D005363 ORTHO05D006607 1.9e-16 91.7 119 48.7
Cc06_g05450 Coffea canephora HOM05D005363 ORTHO05D006607 5.6e-16 90.1 229 42.4
GSVIVG01004486001 Vitis vinifera HOM05D004774 ORTHO05D005514 2.8e-15 87.8 225 33.8
GSVIVG01002726001 Vitis vinifera HOM05D005363 ORTHO05D006607 8.4e-12 76.3 174 35.6
THA.LOC104811844 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 1.2e-10 72.4 204 42.6
GSVIVG01001488001 Vitis vinifera HOM05D005363 ORTHO05D006607 1.3e-09 68.9 171 33.9
CDE12G0057 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 4.8e-07 60.5 30 80.0
GSVIVG01001483001 Vitis vinifera HOM05D005363 ORTHO05D006607 1.4e-06 58.9 90 41.1
Sopen00g012230 Solanum pennellii HOM05D005363 ORTHO05D006607 2.4e-06 58.2 77 55.8


User provided reference genes

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