Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03955 Eucalyptus grandis HOM05D000809 ORTHO05D007733 9.5e-74 280.0 135 100.0
Eucgr.C04130 Eucalyptus grandis HOM05D000809 ORTHO05D007733 7.3e-50 200.7 133 77.4
Eucgr.C03960 Eucalyptus grandis HOM05D000809 ORTHO05D007733 7.5e-47 190.7 133 74.4
Eucgr.C03953 Eucalyptus grandis HOM05D000809 ORTHO05D007733 1.0e-43 180.3 133 70.7
TWI63G1087 Tripterygium wilfordii HOM05D000809 ORTHO05D007733 5.1e-43 177.9 132 68.2
GSVIVG01015424001 Vitis vinifera HOM05D000809 ORTHO05D007733 5.1e-43 177.9 132 68.9
Medtr6g086600 Medicago truncatula HOM05D000809 ORTHO05D007733 8.6e-43 177.2 132 68.9
COL.COLO4_34883 Corchorus olitorius HOM05D000809 ORTHO05D007733 1.5e-42 176.4 132 68.9
Nn8g39257 Nelumbo nucifera HOM05D000809 ORTHO05D007733 1.5e-42 176.4 132 69.7
QL02p085975 Quercus lobata HOM05D000809 ORTHO05D007733 1.5e-42 176.4 132 68.9
TWI34G1334 Tripterygium wilfordii HOM05D000809 ORTHO05D007733 1.5e-42 176.4 132 67.4
MELO3C025316.2 Cucumis melo HOM05D000809 ORTHO05D007733 1.9e-42 176.0 132 68.2
CsaV3_1G030840 Cucumis sativus L. HOM05D000809 ORTHO05D007733 1.9e-42 176.0 132 68.2
Atru.chr7.1304 Acer truncatum HOM05D000809 ORTHO05D007733 2.5e-42 175.6 132 68.2
Cpa.g.sc23.132 Carica papaya HOM05D000809 ORTHO05D007733 2.5e-42 175.6 132 68.9
Ca_25514_v3 Cicer arietinum L. HOM05D000809 ORTHO05D007733 2.5e-42 175.6 132 68.2
Duzib168G1885 Durio zibethinus HOM05D000809 ORTHO05D007733 2.5e-42 175.6 132 68.9
Lalb_Chr24g0397641 Lupinus albus HOM05D000809 ORTHO05D007733 2.5e-42 175.6 132 68.9
Ciclev10007988m.g Citrus clementina HOM05D000809 ORTHO05D007733 3.3e-42 175.3 132 68.9
Manes.16G070800 Manihot esculenta HOM05D000809 ORTHO05D007733 3.3e-42 175.3 132 68.9
Phvul.004G160900 Phaseolus vulgaris HOM05D000809 ORTHO05D007733 3.3e-42 175.3 132 68.9
Psat1g039560 Pisum sativum HOM05D000809 ORTHO05D007733 3.3e-42 175.3 132 68.2
PGR102G2432 Punica granatum HOM05D000809 ORTHO05D007733 3.3e-42 175.3 132 68.9
Glyma.07G089200 Glycine max HOM05D000809 ORTHO05D007733 4.3e-42 174.9 132 68.9
Glyma.09G187800 Glycine max HOM05D000809 ORTHO05D007733 4.3e-42 174.9 132 68.9
Thecc.09G114200 Theobroma cacao HOM05D000809 ORTHO05D007733 4.3e-42 174.9 132 68.9
TAR624G0463 Trochodendron aralioides HOM05D000809 ORTHO05D007733 4.3e-42 174.9 132 67.4
C07p56430 Brassica napus HOM05D000809 ORTHO05D007733 5.6e-42 174.5 132 67.4
BolC7t46122H Brassica oleracea HOM05D000809 ORTHO05D007733 5.6e-42 174.5 132 67.4
CANSAT56G3015 Cannabis sativa HOM05D000809 ORTHO05D007733 5.6e-42 174.5 132 67.4
Lj2g0016022 Lotus japonicus HOM05D000809 ORTHO05D007733 9.5e-42 173.7 132 67.4
Nitab4.5_0001672g0130 Nicotiana tabacum HOM05D000809 ORTHO05D007733 9.5e-42 173.7 132 66.7
Nitab4.5_0003537g0040 Nicotiana tabacum HOM05D000809 ORTHO05D007733 9.5e-42 173.7 132 66.7
BcaC06g32603 Brassica carinata HOM05D000809 ORTHO05D007733 1.2e-41 173.3 132 66.7
CAN.G1710.9 Capsicum annuum HOM05D000809 ORTHO05D007733 1.2e-41 173.3 132 66.7
TPR.G31450 Trifolium pratense HOM05D000809 ORTHO05D007733 1.2e-41 173.3 132 66.7
Cfa003287 Carpinus fangiana HOM05D000809 ORTHO05D007733 1.6e-41 172.9 132 68.2
Cc06_g09380 Coffea canephora HOM05D000809 ORTHO05D007733 1.6e-41 172.9 132 66.7
TAR626G0858 Trochodendron aralioides HOM05D000809 ORTHO05D007733 1.6e-41 172.9 132 67.4
Aqoxy7G01822 Aquilegia oxysepala HOM05D000809 ORTHO05D007733 2.8e-41 172.2 132 66.7
A03p58410 Brassica napus HOM05D000809 ORTHO05D007733 2.8e-41 172.2 132 65.9
BraA03t14902Z Brassica rapa HOM05D000809 ORTHO05D007733 2.8e-41 172.2 132 65.9
Peaxi162Scf00546g00322 Petunia axillaris HOM05D000809 ORTHO05D007733 2.8e-41 172.2 132 66.7
Solyc12g007010.2 Solanum lycopersicum HOM05D000809 ORTHO05D007733 2.8e-41 172.2 132 65.9
Sopen12g002980 Solanum pennellii HOM05D000809 ORTHO05D007733 2.8e-41 172.2 132 65.9
PGSC0003DMG400000383 Solanum tuberosum HOM05D000809 ORTHO05D007733 2.8e-41 172.2 132 65.9
ATR0037G048 Amborella trichopoda HOM05D000809 ORTHO05D007733 3.6e-41 171.8 132 66.7
CSS0004763 Camellia sinensis var. sinensis HOM05D000809 ORTHO05D007733 3.6e-41 171.8 132 68.2
CSS0005642 Camellia sinensis var. sinensis HOM05D000809 ORTHO05D007733 3.6e-41 171.8 132 68.2
AUR62011020 Chenopodium quinoa HOM05D000809 ORTHO05D007733 3.6e-41 171.8 132 65.9
Nn2g11810 Nelumbo nucifera HOM05D000809 ORTHO05D007733 3.6e-41 171.8 132 67.4
SGA_v2.0_scaffold109G31030 Striga asiatica HOM05D000809 ORTHO05D007733 4.7e-41 171.4 132 64.4
CiPaw.03G234800 Carya illinoinensis HOM05D000809 ORTHO05D007733 6.2e-41 171.0 132 66.7
Potri.018G076600 Populus trichocarpa HOM05D000809 ORTHO05D007733 6.2e-41 171.0 132 65.9
VMungo0464G1974 Vigna mungo HOM05D000809 ORTHO05D007733 6.2e-41 171.0 132 67.4
SalBow1G2443 Salvia bowleyana HOM05D000809 ORTHO05D007733 8.1e-41 170.6 132 66.7
Sp3g24440 Schrenkiella parvula HOM05D000809 ORTHO05D007733 8.1e-41 170.6 132 65.2
Sc08g0007210 Simmondsia chinensis HOM05D000809 ORTHO05D007733 1.1e-40 170.2 132 67.4
THA.LOC104808749 Tarenaya hassleriana HOM05D000809 ORTHO05D007733 1.1e-40 170.2 132 65.9
PSO063G5751 Papaver somniferum HOM05D000809 ORTHO05D007733 1.4e-40 169.9 132 65.9
PSO782G1122 Papaver somniferum HOM05D000809 ORTHO05D007733 1.4e-40 169.9 132 65.9
Aa31LG8G11120 Aethionema arabicum HOM05D000809 ORTHO05D007733 1.8e-40 169.5 132 65.2
MSTRG.10680 Avicennia marina HOM05D000809 ORTHO05D007733 1.8e-40 169.5 132 65.2
CDE04G2267 Ceratophyllum demersum HOM05D000809 ORTHO05D007733 1.8e-40 169.5 132 64.4
Gohir.A05G021400 Gossypium hirsutum HOM05D000809 ORTHO05D007733 1.8e-40 169.5 132 67.4
Gohir.D05G022766 Gossypium hirsutum HOM05D000809 ORTHO05D007733 1.8e-40 169.5 132 67.4
Gohir.D05G022900 Gossypium hirsutum HOM05D000809 ORTHO05D007733 1.8e-40 169.5 132 67.4
Gorai.009G023100 Gossypium raimondii HOM05D000809 ORTHO05D007733 1.8e-40 169.5 132 67.4
CARHR100520 Cardamine hirsuta HOM05D000809 ORTHO05D007733 2.3e-40 169.1 132 64.4
Thhalv10002483m.g Eutrema salsugineum HOM05D000809 ORTHO05D007733 2.3e-40 169.1 132 65.2
Sed0012141 Sechium edule HOM05D000809 ORTHO05D007733 2.3e-40 169.1 132 65.2
unitig_899.g15426 Utricularia gibba HOM05D000809 ORTHO05D007733 2.3e-40 169.1 132 65.2
AL3G39860 Arabidopsis lyrata HOM05D000809 ORTHO05D007733 3.1e-40 168.7 132 64.4
AT3G24430 Arabidopsis thaliana HOM05D000809 ORTHO05D007733 3.1e-40 168.7 132 64.4
Carub.0003s2473 Capsella rubella HOM05D000809 ORTHO05D007733 3.1e-40 168.7 132 64.4
CDE06G2677 Ceratophyllum demersum HOM05D000809 ORTHO05D007733 4.0e-40 168.3 132 64.4
Prupe.7G227600 Prunus persica HOM05D000809 ORTHO05D007733 4.0e-40 168.3 132 65.9
Oeu000378.3 Olea europaea HOM05D000809 ORTHO05D007733 5.2e-40 167.9 132 64.4
ECA238G4585 Erigeron canadensis HOM05D000809 ORTHO05D007733 6.8e-40 167.5 132 65.2
Migut.K00460 Erythranthe guttata HOM05D000809 ORTHO05D007733 6.8e-40 167.5 132 64.4
HanXRQChr05g0137991 Helianthus annuus HOM05D000809 ORTHO05D007733 1.2e-39 166.8 132 65.2
FvH4_1g05310 Fragaria vesca HOM05D000809 ORTHO05D007733 4.4e-39 164.9 132 63.6
FAN19G0453 Fragaria x ananassa HOM05D000809 ORTHO05D007733 4.4e-39 164.9 132 63.6
FAN26G0422 Fragaria x ananassa HOM05D000809 ORTHO05D007733 4.4e-39 164.9 132 63.6
FAN26G2813 Fragaria x ananassa HOM05D000809 ORTHO05D007733 4.4e-39 164.9 132 63.6
Lsat_1_v5_gn_8_93401 Lactuca sativa HOM05D000809 ORTHO05D007733 5.8e-39 164.5 132 64.4
RcHm_v2.0_Chr2g0091011 Rosa chinensis HOM05D000809 ORTHO05D007733 7.6e-39 164.1 132 62.9
HPP92_006444 Vanilla planifolia HOM05D000809 ORTHO05D007733 9.9e-39 163.7 132 63.6
Zm00001eb089070 Zea mays HOM05D000809 ORTHO05D007733 9.9e-39 163.7 132 62.9
SEGI_18085 Sequoiadendron giganteum HOM05D000809 ORTHO05D007733 2.4e-37 159.1 132 62.1
DCAR_012086 Daucus carota HOM05D000809 ORTHO05D007733 9.2e-37 157.1 132 61.4
Actinidia32693 Actinidia chinensis HOM05D000809 ORTHO05D007733 2.7e-36 155.6 132 63.6
Haze_25686 Corylus avellana HOM05D000809 ORTHO05D007733 2.7e-36 155.6 161 55.9
Rhsim01G0091800 Rhododendron simsii HOM05D000809 ORTHO05D007733 2.5e-34 149.1 89 82.0
Mapoly0100s0060 Marchantia polymorpha HOM05D000809 ORTHO05D007733 4.3e-34 148.3 132 53.8
vmacro20667 Vaccinium macrocarpon HOM05D000809 ORTHO05D007733 1.2e-33 146.7 88 80.7
arahy.Tifrunner.gnm1.ann1.JACH1V Arachis hypogaea HOM05D000809 ORTHO05D007733 1.6e-33 146.4 132 59.8
Oeu013437.1 Olea europaea HOM05D000396 ORTHO05D007733 1.6e-33 146.4 122 62.3
arahy.Tifrunner.gnm1.ann1.G2DL39 Arachis hypogaea HOM05D000809 ORTHO05D007733 1.1e-32 143.7 132 62.1
EL10Ac8g18530 Beta vulgaris HOM05D000809 ORTHO05D007733 1.1e-32 143.7 98 73.5
MD15G1189200 Malus domestica HOM05D000809 ORTHO05D007733 1.1e-32 143.7 88 80.7
Lj7C645G9 Lonicera japonica HOM05D000809 ORTHO05D007733 6.9e-32 141.0 89 78.7
ClCG06G010380 Citrullus lanatus HOM05D000809 ORTHO05D007733 1.5e-31 139.8 103 69.9
SMO118G0383 Selaginella moellendorffii HOM05D000809 ORTHO05D007733 1.5e-31 139.8 138 53.6
Pp3c19_20070 Physcomitrium patens HOM05D000809 ORTHO05D007733 2.6e-31 139.0 132 53.8
MD02G1056300 Malus domestica HOM05D000809 ORTHO05D007733 4.9e-30 134.8 87 77.0
Hund09189 Selenicereus undatus HOM05D000809 ORTHO05D007733 1.1e-29 133.7 119 60.5
CBR_g30185 Chara braunii HOM05D000809 ORTHO05D007733 4.2e-29 131.7 132 50.0
Sabra18G0064600 Salix brachista HOM05D000809 ORTHO05D007733 6.0e-28 127.9 121 59.5
Actinidia07419 Actinidia chinensis HOM05D000809 ORTHO05D007733 1.3e-27 126.7 132 54.5
Dinv36606 Davidia involucrata HOM05D000809 ORTHO05D007733 5.1e-27 124.8 103 63.1
AUR62033393 Chenopodium quinoa HOM05D000809 ORTHO05D007733 1.4e-24 116.7 132 50.0
Ah.10g029140 Amaranthus hybridus HOM05D000809 ORTHO05D007733 4.5e-23 111.7 70 77.1
RcHm_v2.0_Chr3g0496131 Rosa chinensis HOM05D000809 ORTHO05D007733 5.8e-23 111.3 70 75.7
SpUn0651_0010 Schrenkiella parvula HOM05D000809 ORTHO05D007733 5.8e-23 111.3 70 77.1
Pp3c8_23290 Physcomitrium patens HOM05D000809 ORTHO05D007733 1.1e-16 90.5 132 40.9
PRCOL_00006186 Prasinoderma coloniale HOM05D000809 ORTHO05D007733 3.5e-12 75.5 101 37.6
Cre01.g045902 Chlamydomonas reinhardtii HOM05D000809 ORTHO05D007733 8.2e-09 64.3 137 35.0
MCO05G106 Micromonas commoda HOM05D000809 ORTHO05D007733 6.9e-08 61.2 102 35.3
AagrBONN_evm.TU.Sc2ySwM_228.454 Anthoceros agrestis HOM05D000809 ORTHO05D007733 7.6e-07 57.8 61 47.5
RcHm_v2.0_Chr2g0147101 Rosa chinensis HOM05D000809 ORTHO05D007733 4.9e-06 55.1 32 78.1


User provided reference genes

Program Settings