Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02475 Eucalyptus grandis HOM05D000216 ORTHO05D001131 4.8e-42 174.1 89 100.0
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.6e-27 125.2 89 79.8
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 3.3e-27 124.8 89 78.7
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 5.7e-27 124.0 89 78.7
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 5.7e-27 124.0 89 78.7
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 7.5e-27 123.6 89 77.5
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 7.5e-27 123.6 89 77.5
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 7.5e-27 123.6 89 77.5
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 7.5e-27 123.6 89 77.5
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 7.5e-27 123.6 89 77.5
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 7.5e-27 123.6 89 77.5
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 7.5e-27 123.6 89 77.5
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 9.7e-27 123.2 89 78.7
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 1.3e-26 122.9 89 78.7
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 1.3e-26 122.9 89 78.7
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 1.3e-26 122.9 96 76.0
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 1.7e-26 122.5 89 77.5
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 2.8e-26 121.7 89 77.5
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 2.8e-26 121.7 89 77.5
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 2.8e-26 121.7 89 77.5
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 4.8e-26 120.9 89 77.5
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 4.8e-26 120.9 89 77.5
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 4.8e-26 120.9 89 76.4
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 77.5
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 77.5
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 77.5
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 77.5
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 77.5
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 77.5
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 77.5
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 77.5
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 77.5
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 77.5
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 76.4
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 76.4
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 6.3e-26 120.6 89 76.4
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 8.3e-26 120.2 89 77.5
Gohir.D12G085301 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.1e-25 119.8 89 76.4
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 1.8e-25 119.0 89 76.4
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 1.8e-25 119.0 89 76.4
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 1.8e-25 119.0 89 76.4
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 1.8e-25 119.0 89 74.2
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 1.8e-25 119.0 88 75.0
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 2.4e-25 118.6 89 75.3
Gorai.008G095600 Gossypium raimondii HOM05D000216 ORTHO05D001131 5.3e-25 117.5 89 75.3
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 1.6e-24 115.9 89 75.3
Hund28715 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.0e-24 115.5 89 74.2
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27928 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27944 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28292 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28372 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28555 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-24 114.4 89 73.0
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 5.9e-24 114.0 89 74.2
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 7.7e-24 113.6 89 74.2
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 7.7e-24 113.6 89 74.2
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.0e-23 113.2 89 71.9
Hund28280 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.3e-23 112.8 88 72.7
HanXRQChr11g0326591 Helianthus annuus HOM05D000216 ORTHO05D001131 1.5e-22 109.4 89 69.7
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 1.5e-22 109.4 89 69.7
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.5e-22 109.4 89 69.7
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.5e-22 109.4 89 69.7
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 3.2e-22 108.2 82 74.4
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 4.2e-22 107.8 80 77.5
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 4.2e-22 107.8 89 68.5
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 4.2e-22 107.8 89 68.5
Medtr5g005060 Medicago truncatula HOM05D000216 ORTHO05D001131 7.2e-22 107.1 81 74.1
Psat4g147960 Pisum sativum HOM05D000216 ORTHO05D001131 1.4e-20 102.8 81 72.8
HanXRQChr00c0165g0572161 Helianthus annuus HOM05D000216 ORTHO05D001131 2.3e-20 102.1 89 68.5
Eucgr.C02946 Eucalyptus grandis HOM05D000216 ORTHO05D001131 2.2e-18 95.5 51 96.1
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.2e-18 95.5 51 96.1
Eucgr.E02520 Eucalyptus grandis HOM05D000216 ORTHO05D001131 3.7e-18 94.7 89 65.2
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 8.3e-18 93.6 52 92.3
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.1e-17 93.2 51 94.1
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.8e-17 92.4 76 65.8
VMungo0647G1325 Vigna mungo HOM05D000216 ORTHO05D001131 2.0e-16 89.0 81 61.7
C04p22650 Brassica napus HOM05D000216 ORTHO05D001131 2.9e-15 85.1 66 69.7
BolC7t41731H Brassica oleracea HOM05D000216 ORTHO05D001131 2.9e-15 85.1 66 69.7
BolSC37t60764H Brassica oleracea HOM05D000216 ORTHO05D001131 2.9e-15 85.1 66 69.7
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 3.8e-15 84.7 67 70.1
ClCG07G004170 Citrullus lanatus HOM05D000216 ORTHO05D001131 1.1e-14 83.2 68 69.1
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.5e-14 82.8 67 70.1
TPR.G32479 Trifolium pratense HOM05D000216 ORTHO05D001131 1.5e-14 82.8 51 82.4
Nitab4.5_0001715g0110 Nicotiana tabacum HOM05D000216 ORTHO05D001131 3.3e-14 81.6 75 70.7
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 7.2e-14 80.5 52 80.8
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.0e-12 76.6 65 66.2
arahy.Tifrunner.gnm1.ann1.Q51NGA Arachis hypogaea HOM05D000216 ORTHO05D001131 5.2e-12 74.3 62 67.7
Psat0s5655g0160 Pisum sativum HOM05D000216 ORTHO05D001131 1.7e-10 69.3 61 63.9
Solyc02g067590.2 Solanum lycopersicum HOM05D000216 ORTHO05D001131 2.8e-10 68.6 62 62.9
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 4.9e-10 67.8 62 62.9
BolSC46t60987H Brassica oleracea HOM05D000216 ORTHO05D001131 1.8e-09 65.9 65 60.0
Gorai.005G047300 Gossypium raimondii HOM05D000216 ORTHO05D001131 3.1e-09 65.1 61 59.0
Thecc.07G188500 Theobroma cacao HOM05D000216 ORTHO05D001131 5.4e-09 64.3 34 97.1
CSS0046430 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D001131 2.9e-07 58.5 53 64.2
SMO086G0059 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.6e-07 57.4 85 43.5
SMO113G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.6e-07 57.4 85 43.5
SMO161G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.6e-07 57.4 85 43.5
SMO168G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.6e-07 57.4 85 43.5
SMO237G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.6e-07 57.4 85 43.5
SMO299G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.6e-07 57.4 85 43.5
BolSC45t60873H Brassica oleracea HOM05D000216 ORTHO05D001131 1.5e-06 56.2 54 57.4
Gorai.007G168000 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.5e-06 56.2 54 59.3
Psat0s6638g0160 Pisum sativum HOM05D000216 ORTHO05D001131 5.6e-06 54.3 53 58.5
BraSC25t45880Z Brassica rapa HOM05D000216 ORTHO05D001131 9.5e-06 53.5 65 50.8


User provided reference genes

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