Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A00266 Eucalyptus grandis HOM05D004387 ORTHO05D005218 1.9e-136 489.2 250 100.0
Eucgr.A00059 Eucalyptus grandis HOM05D004387 ORTHO05D005218 4.0e-94 348.6 304 69.1
Eucgr.A00069 Eucalyptus grandis HOM05D004387 ORTHO05D005218 4.8e-79 298.5 313 61.3
Eucgr.A00265 Eucalyptus grandis HOM05D004387 ORTHO05D005218 4.8e-79 298.5 285 64.9
Eucgr.A00267 Eucalyptus grandis HOM05D004387 ORTHO05D005218 3.1e-78 295.8 297 62.3
Dinv39602 Davidia involucrata HOM05D004387 ORTHO05D005218 3.5e-74 282.3 304 58.6
Manes.08G050500 Manihot esculenta HOM05D004387 ORTHO05D005218 6.0e-74 281.6 304 56.6
Potri.006G051200 Populus trichocarpa HOM05D004387 ORTHO05D005218 3.0e-73 279.3 304 56.2
PGR142G2016 Punica granatum HOM05D004387 ORTHO05D005218 1.1e-72 277.3 309 56.6
MELO3C023136.2 Cucumis melo HOM05D004387 ORTHO05D005218 1.9e-72 276.6 305 57.7
Potri.016G055600 Populus trichocarpa HOM05D004387 ORTHO05D005218 4.3e-72 275.4 304 56.2
Dinv12482 Davidia involucrata HOM05D004387 ORTHO05D005218 1.6e-71 273.5 304 55.6
CsaV3_4G011700 Cucumis sativus L. HOM05D004387 ORTHO05D005218 2.1e-71 273.1 305 57.4
Thecc.05G153400 Theobroma cacao HOM05D004387 ORTHO05D005218 2.1e-71 273.1 304 55.6
Duzib093G1767 Durio zibethinus HOM05D004387 ORTHO05D005218 6.2e-71 271.6 304 55.6
TWI77G0383 Tripterygium wilfordii HOM05D004387 ORTHO05D005218 8.1e-71 271.2 300 56.0
Actinidia17236 Actinidia chinensis HOM05D004387 ORTHO05D005218 1.1e-70 270.8 304 57.2
CSS0003189 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 1.4e-70 270.4 304 55.9
Actinidia38546 Actinidia chinensis HOM05D004387 ORTHO05D005218 5.3e-70 268.5 276 59.4
Lju124A41T49 Lonicera japonica HOM05D004387 ORTHO05D005218 5.3e-70 268.5 304 54.9
Sabra06G0035900 Salix brachista HOM05D004387 ORTHO05D005218 5.3e-70 268.5 317 53.9
Cc07_g20870 Coffea canephora HOM05D004387 ORTHO05D005218 9.0e-70 267.7 307 55.4
Eucgr.A00063 Eucalyptus grandis HOM05D004387 ORTHO05D005218 9.0e-70 267.7 263 63.1
Sed0012804 Sechium edule HOM05D004387 ORTHO05D005218 1.2e-69 267.3 306 55.6
Cfa016818 Carpinus fangiana HOM05D004387 ORTHO05D005218 1.5e-69 266.9 304 54.3
Cfa006454 Carpinus fangiana HOM05D004387 ORTHO05D005218 3.4e-69 265.8 276 57.2
Atru.chr1.1097 Acer truncatum HOM05D004387 ORTHO05D005218 4.5e-69 265.4 304 54.3
DCAR_013603 Daucus carota HOM05D004387 ORTHO05D005218 7.6e-69 264.6 304 54.3
Oeu017945.1 Olea europaea HOM05D004387 ORTHO05D005218 1.3e-68 263.8 304 54.6
CiPaw.09G038200 Carya illinoinensis HOM05D004387 ORTHO05D005218 1.7e-68 263.5 304 54.9
Peaxi162Scf00354g00222 Petunia axillaris HOM05D004387 ORTHO05D005218 1.7e-68 263.5 306 56.2
Glyma.08G246800 Glycine max HOM05D004387 ORTHO05D005218 2.9e-68 262.7 276 55.8
QL02p103266 Quercus lobata HOM05D004387 ORTHO05D005218 2.9e-68 262.7 310 54.5
Hund05284 Selenicereus undatus HOM05D004387 ORTHO05D005218 2.9e-68 262.7 304 53.3
TWI74G1664 Tripterygium wilfordii HOM05D004387 ORTHO05D005218 2.9e-68 262.7 304 53.6
Cpa.g.sc3.336 Carica papaya HOM05D004387 ORTHO05D005218 3.8e-68 262.3 288 55.6
Lalb_Chr01g0017301 Lupinus albus HOM05D004387 ORTHO05D005218 8.4e-68 261.2 276 55.1
Lalb_Chr20g0110501 Lupinus albus HOM05D004387 ORTHO05D005218 8.4e-68 261.2 276 55.4
RcHm_v2.0_Chr3g0482341 Rosa chinensis HOM05D004387 ORTHO05D005218 1.1e-67 260.8 304 54.9
TAR633G2397 Trochodendron aralioides HOM05D004387 ORTHO05D005218 1.1e-67 260.8 304 54.6
CAN.G128.9 Capsicum annuum HOM05D004387 ORTHO05D005218 1.4e-67 260.4 306 55.2
GSVIVG01033276001 Vitis vinifera HOM05D004387 ORTHO05D005218 1.4e-67 260.4 312 53.5
Nitab4.5_0004587g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 3.2e-67 259.2 304 54.9
Sopen10g030740 Solanum pennellii HOM05D004387 ORTHO05D005218 4.2e-67 258.8 306 54.2
COL.COLO4_28283 Corchorus olitorius HOM05D004387 ORTHO05D005218 5.5e-67 258.5 304 53.9
Ciclev10005512m.g Citrus clementina HOM05D004387 ORTHO05D005218 1.2e-66 257.3 304 53.9
Psat6g037480 Pisum sativum HOM05D004387 ORTHO05D005218 1.6e-66 256.9 276 55.4
ECA248G3203 Erigeron canadensis HOM05D004387 ORTHO05D005218 2.7e-66 256.1 303 53.5
Migut.K00090 Erythranthe guttata HOM05D004387 ORTHO05D005218 2.7e-66 256.1 305 53.8
Gohir.A02G158900 Gossypium hirsutum HOM05D004387 ORTHO05D005218 2.7e-66 256.1 304 53.0
Lj6g0019382 Lotus japonicus HOM05D004387 ORTHO05D005218 6.0e-66 255.0 276 54.7
Phvul.011G181200 Phaseolus vulgaris HOM05D004387 ORTHO05D005218 6.0e-66 255.0 276 54.3
CAN.G1001.5 Capsicum annuum HOM05D004387 ORTHO05D005218 7.9e-66 254.6 306 53.6
Gohir.D01G090600 Gossypium hirsutum HOM05D004387 ORTHO05D005218 7.9e-66 254.6 304 52.6
Solyc06g075390.4 Solanum lycopersicum HOM05D004387 ORTHO05D005218 7.9e-66 254.6 305 53.4
VMungo0331G1303 Vigna mungo HOM05D004387 ORTHO05D005218 7.9e-66 254.6 276 54.7
Gohir.A01G009000 Gossypium hirsutum HOM05D004387 ORTHO05D005218 1.3e-65 253.8 304 52.3
PGSC0003DMG400007507 Solanum tuberosum HOM05D004387 ORTHO05D005218 1.3e-65 253.8 306 53.6
Glyma.14G145600 Glycine max HOM05D004387 ORTHO05D005218 3.0e-65 252.7 276 55.1
AUR62024448 Chenopodium quinoa HOM05D004387 ORTHO05D005218 3.9e-65 252.3 287 53.0
FvH4_6g23810 Fragaria vesca HOM05D004387 ORTHO05D005218 3.9e-65 252.3 304 53.6
Gorai.002G116000 Gossypium raimondii HOM05D004387 ORTHO05D005218 5.1e-65 251.9 307 51.8
MBI11_g09466_MAGBIO Magnolia biondii HOM05D004387 ORTHO05D005218 5.1e-65 251.9 303 53.1
Sopen06g031800 Solanum pennellii HOM05D004387 ORTHO05D005218 5.1e-65 251.9 305 53.1
TPR.G24500 Trifolium pratense HOM05D004387 ORTHO05D005218 1.1e-64 250.8 304 51.0
Aqoxy5G00267 Aquilegia oxysepala HOM05D004387 ORTHO05D005218 1.5e-64 250.4 305 52.8
Ah.13g076470 Amaranthus hybridus HOM05D004387 ORTHO05D005218 1.9e-64 250.0 319 50.5
MSTRG.10813 Avicennia marina HOM05D004387 ORTHO05D005218 3.3e-64 249.2 304 52.3
HanXRQChr01g0008751 Helianthus annuus HOM05D004387 ORTHO05D005218 5.6e-64 248.4 291 52.9
HanXRQChr06g0178491 Helianthus annuus HOM05D004387 ORTHO05D005218 7.4e-64 248.1 291 53.6
CARHR052860 Cardamine hirsuta HOM05D004387 ORTHO05D005218 1.6e-63 246.9 303 50.2
Medtr1g007060 Medicago truncatula HOM05D004387 ORTHO05D005218 1.6e-63 246.9 278 53.2
FAN02G2904 Fragaria x ananassa HOM05D004387 ORTHO05D005218 8.1e-63 244.6 325 50.5
Nitab4.5_0009442g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 8.1e-63 244.6 295 53.9
Rhsim09G0155500 Rhododendron simsii HOM05D004387 ORTHO05D005218 8.1e-63 244.6 372 46.2
Ca_03365_v3 Cicer arietinum L. HOM05D004387 ORTHO05D005218 1.1e-62 244.2 272 53.3
MD12G1073800 Malus domestica HOM05D004387 ORTHO05D005218 2.4e-62 243.0 304 52.0
CANSAT21G1698 Cannabis sativa HOM05D004387 ORTHO05D005218 4.0e-62 242.3 300 52.3
Lsat_1_v5_gn_5_161440 Lactuca sativa HOM05D004387 ORTHO05D005218 1.5e-61 240.4 304 51.0
AT1G60080 Arabidopsis thaliana HOM05D004387 ORTHO05D005218 2.6e-61 239.6 303 49.5
FAN05G1657 Fragaria x ananassa HOM05D004387 ORTHO05D005218 2.6e-61 239.6 325 50.2
FAN14G1242 Fragaria x ananassa HOM05D004387 ORTHO05D005218 2.6e-61 239.6 297 51.9
PSO170G6628 Papaver somniferum HOM05D004387 ORTHO05D005218 3.4e-61 239.2 297 52.2
Prupe.7G061000 Prunus persica HOM05D004387 ORTHO05D005218 3.4e-61 239.2 300 51.7
Hma1.2p1_0953F.1_g241060 Hydrangea macrophylla HOM05D004387 ORTHO05D005218 1.3e-60 237.3 233 62.2
PSO357G0544 Papaver somniferum HOM05D004387 ORTHO05D005218 1.3e-60 237.3 297 51.5
Aqoxy2G02875 Aquilegia oxysepala HOM05D004387 ORTHO05D005218 8.4e-60 234.6 304 50.0
THA.LOC104823663 Tarenaya hassleriana HOM05D004387 ORTHO05D005218 5.5e-59 231.9 305 48.2
Thhalv10023611m.g Eutrema salsugineum HOM05D004387 ORTHO05D005218 7.1e-59 231.5 303 48.2
AL2G16570 Arabidopsis lyrata HOM05D004387 ORTHO05D005218 1.2e-58 230.7 303 47.5
Carub.0002s0514 Capsella rubella HOM05D004387 ORTHO05D005218 1.2e-58 230.7 303 47.2
SGA_v2.0_scaffold273G46436 Striga asiatica HOM05D004387 ORTHO05D005218 1.2e-58 230.7 305 49.2
Sp2g04520 Schrenkiella parvula HOM05D004387 ORTHO05D005218 6.0e-58 228.4 306 48.7
Aa31LG2G10160 Aethionema arabicum HOM05D004387 ORTHO05D005218 7.9e-58 228.0 294 49.7
HPP92_019752 Vanilla planifolia HOM05D004387 ORTHO05D005218 7.9e-58 228.0 284 50.0
CDE04G2438 Ceratophyllum demersum HOM05D004387 ORTHO05D005218 1.3e-57 227.3 278 50.7
Lj4g0008518 Lotus japonicus HOM05D004387 ORTHO05D005218 5.1e-57 225.3 276 51.1
CSS0010572 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 8.7e-57 224.6 312 49.4
PGSC0003DMG400023725 Solanum tuberosum HOM05D004387 ORTHO05D005218 8.7e-57 224.6 235 60.0
SGA_v2.0_scaffold94G28486 Striga asiatica HOM05D004387 ORTHO05D005218 8.7e-57 224.6 304 49.0
BraA09t37397Z Brassica rapa HOM05D004387 ORTHO05D005218 3.7e-55 219.2 302 47.4
arahy.Tifrunner.gnm1.ann1.QD816I Arachis hypogaea HOM05D004387 ORTHO05D005218 4.8e-55 218.8 288 50.0
arahy.Tifrunner.gnm1.ann1.02RJAW Arachis hypogaea HOM05D004387 ORTHO05D005218 6.3e-55 218.4 288 49.7
BcaB07g31201 Brassica carinata HOM05D004387 ORTHO05D005218 8.2e-55 218.0 302 46.7
BNapus_Darmor_BZH_scaffold_155p00060 Brassica napus HOM05D004387 ORTHO05D005218 8.2e-55 218.0 302 47.0
C09p22030 Brassica napus HOM05D004387 ORTHO05D005218 8.2e-55 218.0 302 47.0
BolC9t55109H Brassica oleracea HOM05D004387 ORTHO05D005218 8.2e-55 218.0 302 47.0
FAN09G3586 Fragaria x ananassa HOM05D004387 ORTHO05D005218 8.2e-55 218.0 317 48.3
A09p17690 Brassica napus HOM05D004387 ORTHO05D005218 1.1e-54 217.6 302 47.0
BcaC04g22217 Brassica carinata HOM05D004387 ORTHO05D005218 1.8e-54 216.9 302 46.7
vmacro09074 Vaccinium macrocarpon HOM05D004387 ORTHO05D005218 3.1e-54 216.1 342 45.0
Gorai.002G010400 Gossypium raimondii HOM05D004387 ORTHO05D005218 5.3e-54 215.3 262 51.9
AUR62026038 Chenopodium quinoa HOM05D004387 ORTHO05D005218 1.2e-53 214.2 293 47.4
Eucgr.A00263 Eucalyptus grandis HOM05D004387 ORTHO05D005218 7.6e-53 211.5 173 74.6
Gohir.D01G008666 Gossypium hirsutum HOM05D004387 ORTHO05D005218 1.3e-52 210.7 235 57.4
CSS0024704 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 2.9e-52 209.5 331 45.3
ATR0626G351 Amborella trichopoda HOM05D004387 ORTHO05D005218 2.1e-50 203.4 293 45.4
Sc13g0001760 Simmondsia chinensis HOM05D004387 ORTHO05D005218 3.6e-50 202.6 210 60.5
CSS0027602 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 6.1e-50 201.8 304 47.4
Nn2g15223 Nelumbo nucifera HOM05D004387 ORTHO05D005218 1.9e-48 196.8 303 44.6
EL10Ac3g07090 Beta vulgaris HOM05D004387 ORTHO05D005218 1.2e-45 187.6 339 38.6
Glyma.18G267600 Glycine max HOM05D004387 ORTHO05D005218 2.6e-45 186.4 208 53.8
Cc06_g17110 Coffea canephora HOM05D004387 ORTHO05D005218 1.2e-42 177.6 173 64.2
Os11g0311300 Oryza sativa ssp. japonica HOM05D004387 ORTHO05D005218 2.1e-42 176.8 284 43.7
Zm00001eb175450 Zea mays HOM05D004387 ORTHO05D005218 2.0e-40 170.2 294 40.8
Nitab4.5_0005483g0010 Nicotiana tabacum HOM05D004387 ORTHO05D005218 4.4e-40 169.1 293 43.7
Haze_19856 Corylus avellana HOM05D004387 ORTHO05D005218 9.7e-40 167.9 263 46.0
Solyc10g080130.3 Solanum lycopersicum HOM05D004387 ORTHO05D005218 1.4e-38 164.1 173 60.1
Mapoly0071s0030 Marchantia polymorpha HOM05D004387 ORTHO05D005218 2.9e-36 156.4 296 36.8
Pp3c19_14820 Physcomitrium patens HOM05D004387 ORTHO05D005218 6.5e-36 155.2 290 33.1
ClCG04G000130 Citrullus lanatus HOM05D004387 ORTHO05D005218 5.7e-32 142.1 180 52.8
SMO169G0201 Selaginella moellendorffii HOM05D004387 ORTHO05D005218 1.3e-31 141.0 266 35.3
Gohir.D01G090850 Gossypium hirsutum HOM05D004387 ORTHO05D005218 3.1e-30 136.3 164 50.6
ClCG04G000120 Citrullus lanatus HOM05D004387 ORTHO05D005218 2.0e-29 133.7 126 61.1
unitig_46.g18443 Utricularia gibba HOM05D004387 ORTHO05D005218 8.5e-28 128.3 163 50.3
EL10Ac3g05398 Beta vulgaris HOM05D004387 ORTHO05D005218 8.8e-25 118.2 144 51.4
CSS0026699 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 9.7e-24 114.8 100 68.0
C01p36790 Brassica napus HOM05D004387 ORTHO05D005218 6.3e-23 112.1 133 51.9
BolC1t03637H Brassica oleracea HOM05D004387 ORTHO05D005218 6.3e-23 112.1 133 51.9
Zm00001eb036840 Zea mays HOM05D004387 ORTHO05D005218 3.1e-22 109.8 233 38.2
CSS0046204 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 9.1e-22 108.2 162 48.8
BcaC09g49432 Brassica carinata HOM05D004387 ORTHO05D005218 1.2e-21 107.8 143 48.3
AagrBONN_evm.TU.Sc2ySwM_362.2801 Anthoceros agrestis HOM05D004387 ORTHO05D005218 1.9e-19 100.5 196 36.2
CSS0001525 Camellia sinensis var. sinensis HOM05D004387 ORTHO05D005218 2.6e-16 90.1 195 37.9
Cc06_g17120 Coffea canephora HOM05D004387 ORTHO05D005218 1.3e-15 87.8 127 43.3
SEGI_27972 Sequoiadendron giganteum HOM05D004387 ORTHO05D005218 1.7e-15 87.4 164 36.6
unitig_46.g18442 Utricularia gibba HOM05D004387 ORTHO05D005218 1.1e-14 84.7 162 34.0
Cre10.g440900 Chlamydomonas reinhardtii HOM05D004387 ORTHO05D005218 2.7e-13 80.1 311 24.1
Sc13g0001750 Simmondsia chinensis HOM05D004387 ORTHO05D005218 2.3e-12 77.0 93 46.2
Gohir.D01G090350 Gossypium hirsutum HOM05D004387 ORTHO05D005218 2.5e-11 73.6 97 43.3
Zm00001eb317600 Zea mays HOM05D004387 ORTHO05D005218 4.2e-11 72.8 124 40.3
Gohir.D01G091400 Gossypium hirsutum HOM05D004387 ORTHO05D005218 1.4e-09 67.8 73 53.4
SEGI_29832 Sequoiadendron giganteum HOM05D004387 ORTHO05D005218 1.4e-09 67.8 118 33.9
CBR_g20981 Chara braunii HOM05D004387 ORTHO05D005218 7.5e-08 62.0 167 31.7
Zm00001eb161840 Zea mays HOM05D004387 ORTHO05D005218 6.3e-07 58.9 107 38.3
Haze_01634 Corylus avellana HOM05D004387 ORTHO05D005218 1.8e-06 57.4 38 68.4
TWI32G1049 Tripterygium wilfordii HOM05D004058 ORTHO05D001984 5.4e-06 55.8 227 22.0
Phvul.002G034700 Phaseolus vulgaris HOM05D004058 ORTHO05D001984 9.2e-06 55.1 226 23.0


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