Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11229 Beta vulgaris HOM05D000251 ORTHO05D007889 0.0e+00 1765.0 953 100.0
AUR62036928 Chenopodium quinoa HOM05D000251 ORTHO05D007889 0.0e+00 1284.6 890 74.8
AUR62032169 Chenopodium quinoa HOM05D000251 ORTHO05D007889 0.0e+00 1199.1 895 70.9
Hund02531 Selenicereus undatus HOM05D000251 ORTHO05D007889 0.0e+00 1165.6 875 71.2
Ah.02g114420 Amaranthus hybridus HOM05D000251 ORTHO05D007889 0.0e+00 1079.7 864 70.4
QL10p022316 Quercus lobata HOM05D000251 ORTHO05D007889 1.9e-301 1039.3 828 64.7
Dinv36870 Davidia involucrata HOM05D000251 ORTHO05D007889 3.5e-292 1008.4 873 61.1
Prupe.5G214300 Prunus persica HOM05D000251 ORTHO05D007889 6.7e-291 1004.2 838 61.9
Cfa019845 Carpinus fangiana HOM05D000251 ORTHO05D007889 1.6e-289 999.6 972 56.9
CiPaw.15G123200 Carya illinoinensis HOM05D000251 ORTHO05D007889 2.8e-289 998.8 822 63.3
arahy.Tifrunner.gnm1.ann1.ESZ5GR Arachis hypogaea HOM05D000251 ORTHO05D007889 2.9e-286 988.8 815 63.3
COL.COLO4_32187 Corchorus olitorius HOM05D000251 ORTHO05D007889 1.1e-285 986.9 845 61.1
PGR044G2008 Punica granatum HOM05D000251 ORTHO05D007889 1.1e-285 986.9 880 59.4
Thecc.03G114900 Theobroma cacao HOM05D000251 ORTHO05D007889 1.9e-285 986.1 890 58.2
Psat4g045640 Pisum sativum HOM05D000251 ORTHO05D007889 4.2e-285 984.9 835 61.6
MD14G1219700 Malus domestica HOM05D000251 ORTHO05D007889 1.6e-284 983.0 811 62.9
arahy.Tifrunner.gnm1.ann1.MAJ7P0 Arachis hypogaea HOM05D000251 ORTHO05D007889 3.6e-284 981.9 822 62.9
GSVIVG01008206001 Vitis vinifera HOM05D000251 ORTHO05D007889 3.6e-284 981.9 875 60.0
Medtr4g112420 Medicago truncatula HOM05D000251 ORTHO05D007889 1.0e-283 980.3 809 62.3
Actinidia31039 Actinidia chinensis HOM05D000251 ORTHO05D007889 1.4e-283 979.9 888 58.7
Rhsim08G0149100 Rhododendron simsii HOM05D000251 ORTHO05D007889 1.4e-283 979.9 871 59.8
Lalb_Chr12g0197521 Lupinus albus HOM05D000251 ORTHO05D007889 1.1e-282 976.9 800 62.2
Ca_02522_v3 Cicer arietinum L. HOM05D000251 ORTHO05D007889 2.0e-282 976.1 811 62.3
Sc10g0009620 Simmondsia chinensis HOM05D000251 ORTHO05D007889 2.0e-282 976.1 741 67.5
CsaV3_1G003490 Cucumis sativus L. HOM05D000251 ORTHO05D007889 1.3e-281 973.4 896 58.1
TWI81G0067 Tripterygium wilfordii HOM05D000251 ORTHO05D007889 6.9e-280 967.6 902 58.5
CSS0040641 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D007889 1.5e-279 966.5 894 58.4
TAR622G0769 Trochodendron aralioides HOM05D000251 ORTHO05D007889 1.7e-278 963.0 911 57.0
Glyma.05G015200 Glycine max HOM05D000251 ORTHO05D007889 3.8e-278 961.8 842 59.4
Sed0011411 Sechium edule HOM05D000251 ORTHO05D007889 5.0e-278 961.4 897 58.1
CANSAT80G2803 Cannabis sativa HOM05D000251 ORTHO05D007889 8.5e-278 960.7 899 58.1
MD06G1209200 Malus domestica HOM05D000251 ORTHO05D007889 2.5e-277 959.1 840 60.5
Lj4g0022759 Lotus japonicus HOM05D000251 ORTHO05D007889 3.2e-277 958.7 895 57.7
Duzib205G0552 Durio zibethinus HOM05D000251 ORTHO05D007889 4.2e-277 958.4 814 61.2
Lj9C433G11 Lonicera japonica HOM05D000251 ORTHO05D007889 1.2e-276 956.8 842 60.2
Ciclev10018692m.g Citrus clementina HOM05D000251 ORTHO05D007889 3.0e-275 952.2 887 59.1
Nn4g23656 Nelumbo nucifera HOM05D000251 ORTHO05D007889 3.0e-275 952.2 882 58.2
RcHm_v2.0_Chr7g0184311 Rosa chinensis HOM05D000251 ORTHO05D007889 1.1e-274 950.3 837 59.6
Atru.chr9.705 Acer truncatum HOM05D000251 ORTHO05D007889 1.5e-274 949.9 835 60.2
VMungo1215G2774 Vigna mungo HOM05D000251 ORTHO05D007889 3.3e-274 948.7 895 56.5
FAN18G2230 Fragaria x ananassa HOM05D000251 ORTHO05D007889 9.7e-274 947.2 812 60.5
Potri.012G058100 Populus trichocarpa HOM05D000251 ORTHO05D007889 1.3e-273 946.8 897 57.1
Glyma.17G123700 Glycine max HOM05D000251 ORTHO05D007889 1.4e-272 943.3 899 55.8
Gohir.D03G100900 Gossypium hirsutum HOM05D000251 ORTHO05D007889 3.1e-272 942.2 821 59.2
Gorai.003G106300 Gossypium raimondii HOM05D000251 ORTHO05D007889 3.1e-272 942.2 821 59.2
Gohir.A03G074400 Gossypium hirsutum HOM05D000251 ORTHO05D007889 9.1e-272 940.6 828 58.5
TPR.G2793 Trifolium pratense HOM05D000251 ORTHO05D007889 4.5e-271 938.3 895 56.4
Cc04_g07720 Coffea canephora HOM05D000251 ORTHO05D007889 1.7e-270 936.4 815 60.5
DCAR_015126 Daucus carota HOM05D000251 ORTHO05D007889 9.4e-269 930.6 843 60.0
FvH4_5g12911 Fragaria vesca HOM05D000251 ORTHO05D007889 1.6e-268 929.9 879 56.7
Sabra12G0041800 Salix brachista HOM05D000251 ORTHO05D007889 2.7e-268 929.1 936 54.1
ClCG06G015150 Citrullus lanatus HOM05D000251 ORTHO05D007889 6.1e-268 927.9 911 56.0
Nitab4.5_0000646g0050 Nicotiana tabacum HOM05D000251 ORTHO05D007889 6.1e-268 927.9 834 59.6
Haze_18572 Corylus avellana HOM05D000251 ORTHO05D007889 1.4e-267 926.8 829 60.1
Peaxi162Scf00017g03036 Petunia axillaris HOM05D000251 ORTHO05D007889 1.4e-267 926.8 904 56.7
FAN13G2548 Fragaria x ananassa HOM05D000251 ORTHO05D000414 5.2e-267 924.9 820 59.0
Nitab4.5_0004342g0020 Nicotiana tabacum HOM05D000251 ORTHO05D007889 1.1e-266 923.7 911 56.8
Solyc03g114410.3 Solanum lycopersicum HOM05D000251 ORTHO05D007889 1.4e-264 916.8 858 58.4
CAN.G781.3 Capsicum annuum HOM05D000251 ORTHO05D007889 7.0e-264 914.4 854 58.5
Sopen03g033510 Solanum pennellii HOM05D000251 ORTHO05D007889 1.0e-262 910.6 858 58.0
MELO3C017274.2 Cucumis melo HOM05D000251 ORTHO05D007889 2.2e-262 909.4 809 59.6
HanXRQChr05g0157761 Helianthus annuus HOM05D000251 ORTHO05D007889 3.8e-262 908.7 801 60.4
Aqoxy3G00409 Aquilegia oxysepala HOM05D000251 ORTHO05D007889 1.9e-261 906.4 899 55.8
Lsat_1_v5_gn_5_24161 Lactuca sativa HOM05D000251 ORTHO05D007889 7.2e-261 904.4 875 57.0
FAN18G3790 Fragaria x ananassa HOM05D000251 ORTHO05D007889 8.8e-259 897.5 950 52.4
AT5G23080 Arabidopsis thaliana HOM05D000251 ORTHO05D007889 4.8e-257 891.7 800 59.6
AL6G34270 Arabidopsis lyrata HOM05D000251 ORTHO05D007889 8.3e-257 891.0 799 59.2
Carub.0006s2087 Capsella rubella HOM05D000251 ORTHO05D007889 1.4e-256 890.2 799 58.8
Eucgr.K02644 Eucalyptus grandis HOM05D000251 ORTHO05D007889 1.8e-256 889.8 900 54.9
Manes.05G117300 Manihot esculenta HOM05D000251 ORTHO05D007889 2.4e-256 889.4 746 62.5
THA.LOC104819385 Tarenaya hassleriana HOM05D000251 ORTHO05D007889 2.0e-255 886.3 823 57.2
vmacro17646 Vaccinium macrocarpon HOM05D000251 ORTHO05D007889 4.5e-255 885.2 941 52.6
ECA246G2449 Erigeron canadensis HOM05D000251 ORTHO05D007889 1.1e-253 880.6 801 60.3
Aa31LG11G2570 Aethionema arabicum HOM05D000251 ORTHO05D007889 1.5e-250 870.2 819 58.2
Sp2g24040 Schrenkiella parvula HOM05D000251 ORTHO05D007889 1.5e-250 870.2 799 57.8
SGA_v2.0_scaffold283G46981 Striga asiatica HOM05D000251 ORTHO05D007889 4.5e-247 858.6 845 56.0
A03p46430 Brassica napus HOM05D000251 ORTHO05D007889 1.0e-246 857.4 821 56.3
BraA03t13769Z Brassica rapa HOM05D000251 ORTHO05D007889 2.9e-246 855.9 878 53.9
C07p44450 Brassica napus HOM05D000251 ORTHO05D007889 5.6e-245 851.7 873 53.7
Migut.G01282 Erythranthe guttata HOM05D000251 ORTHO05D007889 7.3e-245 851.3 818 56.4
Thhalv10003608m.g Eutrema salsugineum HOM05D000251 ORTHO05D007889 2.1e-244 849.7 869 54.7
BolC7t44966H Brassica oleracea HOM05D000251 ORTHO05D007889 1.0e-243 847.4 873 53.6
BcaC04g23479 Brassica carinata HOM05D000251 ORTHO05D007889 1.7e-241 840.1 826 55.1
BolC9t53705H Brassica oleracea HOM05D000251 ORTHO05D007889 1.7e-241 840.1 826 55.1
C09p07920 Brassica napus HOM05D000251 ORTHO05D007889 1.6e-239 833.6 826 54.7
BraA09t36355Z Brassica rapa HOM05D000251 ORTHO05D007889 3.5e-239 832.4 902 51.8
Rhsim08G0139200 Rhododendron simsii HOM05D000251 ORTHO05D007889 1.7e-238 830.1 695 62.3
PSO017G5760 Papaver somniferum HOM05D000251 ORTHO05D007889 3.9e-238 828.9 892 53.5
PSO478G4362 Papaver somniferum HOM05D000251 ORTHO05D007889 2.5e-237 826.2 813 55.7
A09p07070 Brassica napus HOM05D000251 ORTHO05D007889 9.5e-237 824.3 903 51.9
Cpa.g.sc13.78 Carica papaya HOM05D000251 ORTHO05D007889 5.2e-235 818.5 742 58.6
Phvul.003G179400 Phaseolus vulgaris HOM05D000251 ORTHO05D007889 3.6e-228 795.8 785 55.2
BcaB04g19889 Brassica carinata HOM05D000251 ORTHO05D007889 3.1e-227 792.7 827 53.3
CDE08G0099 Ceratophyllum demersum HOM05D000251 ORTHO05D007889 2.1e-223 780.0 810 51.6
ATR0723G093 Amborella trichopoda HOM05D000251 ORTHO05D007889 4.6e-223 778.9 801 53.8
SalBow2G1753 Salvia bowleyana HOM05D000251 ORTHO05D007889 4.3e-221 772.3 858 51.6
Os06g0489200 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D007889 2.3e-219 766.5 894 50.4
unitig_736.g22471 Utricularia gibba HOM05D000251 ORTHO05D007889 1.7e-209 733.8 814 51.4
AagrBONN_evm.TU.Sc2ySwM_344.5190 Anthoceros agrestis HOM05D000251 ORTHO05D007889 2.5e-160 570.5 847 44.4
Nn039s41709 Nelumbo nucifera HOM05D000251 ORTHO05D007889 5.7e-157 559.3 507 57.4
SMO358G0348 Selaginella moellendorffii HOM05D000251 ORTHO05D007889 1.0e-153 548.5 853 41.4
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 7.2e-152 542.3 895 40.3
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 1.1e-139 501.9 840 38.8
CARHR190450 Cardamine hirsuta HOM05D000251 ORTHO05D007889 3.5e-130 470.3 509 51.9
HPP92_003115 Vanilla planifolia HOM05D000251 ORTHO05D007889 1.1e-128 465.3 667 43.6
SEGI_18733 Sequoiadendron giganteum HOM05D000251 ORTHO05D007889 4.7e-119 433.3 440 53.2
Hma1.2p1_0595F.1_g186110 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 1.4e-115 421.8 338 60.4
CBR_g57132 Chara braunii HOM05D000251 ORTHO05D007889 1.2e-93 349.0 1007 30.3
Zm00001eb382170 Zea mays HOM05D000251 ORTHO05D007889 3.4e-93 347.4 513 44.1
Hma1.2p1_0595F.1_g186100 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 3.4e-85 320.9 226 72.1
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 8.2e-63 246.5 734 29.8
Actinidia16061 Actinidia chinensis HOM05D000251 ORTHO05D007889 2.3e-49 201.8 199 54.8
Ah.02g114430 Amaranthus hybridus HOM05D000169 ORTHO05D000542 3.7e-47 194.5 107 89.7
Cre13.g568700 Chlamydomonas reinhardtii HOM05D000251 ORTHO05D007889 5.3e-46 190.7 344 36.9
BcaC06g33188 Brassica carinata HOM05D000251 ORTHO05D007889 8.0e-42 176.8 269 43.1
Psat4g067080 Pisum sativum HOM05D000251 ORTHO05D007889 6.3e-39 167.2 243 41.6
SHI18972 Sapria himalayana HOM05D000251 ORTHO05D007889 8.2e-39 166.8 106 73.6
Actinidia16060 Actinidia chinensis HOM05D000251 ORTHO05D007889 2.0e-29 135.6 169 47.3
CiPaw.15G123400 Carya illinoinensis HOM05D000251 ORTHO05D007889 6.5e-28 130.6 89 75.3
Cfa026338 Carpinus fangiana HOM05D000251 ORTHO05D007889 6.3e-23 114.0 327 31.8
GSVIVG01008210001 Vitis vinifera HOM05D000251 ORTHO05D007889 1.4e-17 96.3 73 64.4
Rhsim08G0139300 Rhododendron simsii HOM05D000251 ORTHO05D007889 4.0e-17 94.7 224 33.9
Hma1.2p1_0690F.1_g203840 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 3.6e-10 71.6 46 78.3
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 8.9e-09 67.0 89 38.2
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 4.4e-08 64.7 104 36.5
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 7.5e-08 63.9 104 34.6
HPP92_003096 Vanilla planifolia HOM05D000251 ORTHO05D007889 1.3e-07 63.2 140 36.4
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 1.7e-07 62.8 110 33.6
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 6.4e-07 60.8 95 35.8
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 6.4e-07 60.8 102 35.3
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 8.3e-07 60.5 86 36.0
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 8.3e-07 60.5 95 36.8
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 1.4e-06 59.7 89 38.2
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 1.9e-06 59.3 89 34.8
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 3.2e-06 58.5 123 28.5
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 3.2e-06 58.5 89 39.3
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 5.4e-06 57.8 89 38.2
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 5.4e-06 57.8 89 34.8
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 7.0e-06 57.4 89 38.2
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 7.0e-06 57.4 81 38.3
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 9.2e-06 57.0 89 36.0


User provided reference genes

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