Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 0.0e+00 1171.0 594 100.0
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.2e-213 746.9 649 63.2
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 9.6e-195 684.1 610 59.7
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 3.6e-194 682.2 595 62.2
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 6.0e-165 585.1 634 51.6
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 1.8e-164 583.6 670 50.7
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 1.1e-161 574.3 634 51.6
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 4.5e-160 568.9 635 51.0
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 7.6e-160 568.2 673 48.4
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 1.3e-159 567.4 634 50.0
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 2.2e-159 566.6 649 50.1
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 6.5e-159 565.1 667 48.3
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 6.5e-159 565.1 672 48.7
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 1.1e-158 564.3 672 48.7
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 1.2e-157 560.8 676 47.6
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 3.6e-157 559.3 639 50.1
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 2.3e-156 556.6 660 48.0
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 2.3e-156 556.6 659 48.6
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 5.1e-156 555.4 651 49.5
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 5.1e-156 555.4 672 49.7
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 1.1e-155 554.3 681 48.2
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 2.5e-155 553.1 660 48.6
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 4.3e-155 552.4 673 48.6
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 2.8e-154 549.7 660 48.2
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 3.7e-154 549.3 669 48.4
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 2.4e-153 546.6 638 49.7
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 2.0e-152 543.5 650 49.1
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 4.5e-152 542.3 670 47.5
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 4.5e-152 542.3 671 47.8
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 2.2e-151 540.0 651 47.9
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.9e-151 539.7 664 47.1
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 5.0e-151 538.9 655 48.9
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 6.5e-151 538.5 646 47.7
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 1.4e-150 537.3 670 48.5
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 2.5e-150 536.6 682 45.2
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 4.2e-150 535.8 668 47.8
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 7.2e-150 535.0 686 45.5
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 9.4e-150 534.6 670 46.4
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 1.2e-149 534.3 664 46.8
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 2.1e-149 533.5 644 48.0
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 2.1e-149 533.5 675 46.2
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 4.6e-149 532.3 618 48.5
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 1.0e-148 531.2 669 47.5
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 1.0e-148 531.2 630 49.0
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 1.8e-148 530.4 694 45.5
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 1.8e-148 530.4 711 44.9
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 5.1e-148 528.9 675 46.8
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 1.1e-147 527.7 679 47.1
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 4.4e-147 525.8 674 46.4
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 4.4e-147 525.8 654 47.9
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 4.8e-146 522.3 635 48.3
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 6.3e-146 521.9 635 48.3
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 3.1e-145 519.6 642 47.7
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 5.3e-145 518.8 662 46.1
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 9.1e-145 518.1 668 45.8
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 1.2e-144 517.7 664 46.1
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 1.5e-144 517.3 634 49.1
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 1.5e-144 517.3 634 49.1
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 1.5e-144 517.3 634 49.1
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 5.9e-144 515.4 715 43.4
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 5.0e-143 512.3 664 46.7
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 8.5e-143 511.5 584 51.7
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 1.9e-142 510.4 608 48.7
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 2.5e-142 510.0 608 48.2
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 4.2e-142 509.2 599 47.4
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 5.5e-142 508.8 674 45.5
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 1.6e-141 507.3 597 47.9
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 1.6e-141 507.3 673 46.1
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 2.7e-141 506.5 599 47.4
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 6.1e-141 505.4 661 46.6
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 1.0e-140 504.6 596 47.5
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 1.8e-140 503.8 834 39.6
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 8.8e-140 501.5 656 44.4
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 3.3e-139 499.6 734 42.4
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 6.3e-138 495.4 594 49.5
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 2.5e-134 483.4 585 48.4
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 9.4e-134 481.5 514 52.5
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 3.6e-133 479.6 613 44.9
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 8.0e-133 478.4 660 44.1
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.8e-132 477.2 562 50.0
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 3.0e-132 476.5 672 43.8
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 7.7e-128 461.8 608 44.4
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 2.9e-127 459.9 601 45.6
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 8.5e-127 458.4 611 45.5
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 6.8e-124 448.7 507 52.5
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 2.0e-123 447.2 548 50.2
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 8.8e-116 421.8 517 48.2
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 3.1e-113 413.3 605 43.3
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 6.6e-111 405.6 610 42.5
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 5.6e-110 402.5 649 39.4
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 3.6e-109 399.8 579 43.7
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 1.4e-108 397.9 661 39.3
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 3.7e-106 389.8 602 38.7
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 1.0e-103 381.7 651 39.5
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 1.1e-97 361.7 517 45.8
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 2.0e-96 357.5 464 47.4
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 1.4e-92 344.7 528 40.0
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 4.1e-89 333.2 470 43.6
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 7.1e-89 332.4 225 72.0
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 9.9e-83 312.0 506 42.1
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 7.8e-80 302.4 258 60.9
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 3.1e-76 290.4 448 40.6
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 5.4e-73 279.6 275 54.9
Sc10g0004230 Simmondsia chinensis HOM05D004944 ORTHO05D005989 5.6e-70 269.6 451 39.2
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 4.5e-67 260.0 738 29.3
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.4e-60 238.4 174 67.8
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 5.3e-60 236.5 908 25.0
vmacro13722 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 2.0e-59 234.6 224 54.0
Psat5g213680 Pisum sativum HOM05D004944 ORTHO05D005989 1.2e-56 225.3 451 37.5
FAN10G4268 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.7e-56 224.2 218 51.8
Peaxi162Scf00309g00015 Petunia axillaris HOM05D004944 ORTHO05D005989 1.8e-55 221.5 300 43.0
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 1.5e-54 218.4 168 62.5
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 4.8e-53 213.4 162 64.2
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 4.5e-51 206.8 167 59.9
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 2.5e-49 201.1 135 71.9
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 4.3e-46 190.3 155 61.3
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 1.4e-41 175.3 163 55.8
BcaNung04417 Brassica carinata HOM05D000343 ORTHO05D003187 8.8e-39 166.0 158 58.9
FAN01G1245 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.5e-35 155.2 143 54.5
CSS0031841 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 2.0e-35 154.8 174 49.4
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 1.0e-34 152.5 140 54.3
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 1.9e-33 148.3 171 46.2
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 2.3e-31 141.4 155 49.0
ATR0721G017 Amborella trichopoda HOM05D004944 ORTHO05D005989 3.9e-31 140.6 205 42.0
Ca_04546_v3 Cicer arietinum L. HOM05D004944 ORTHO05D005989 3.9e-31 140.6 307 34.9
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 2.4e-28 131.3 272 33.1
MCO01G407 Micromonas commoda HOM05D004944 ORTHO05D005989 6.9e-28 129.8 290 33.1
Sp5g22360 Schrenkiella parvula HOM05D004944 ORTHO05D005989 3.4e-27 127.5 139 48.9
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 5.9e-27 126.7 104 63.5
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 5.5e-25 120.2 267 31.1
Lj9A645G78 Lonicera japonica HOM05D004944 ORTHO05D005989 3.0e-23 114.4 296 31.8
Lj9A645G77 Lonicera japonica HOM05D004944 ORTHO05D005989 4.1e-20 104.0 122 42.6
SHI03969 Sapria himalayana HOM05D004944 ORTHO05D005989 9.1e-20 102.8 106 52.8
CSS0024385 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.3e-18 99.0 87 60.9
Cre12.g555050 Chlamydomonas reinhardtii HOM05D004944 ORTHO05D005989 2.9e-18 97.8 173 37.0
Lj9A645G79 Lonicera japonica HOM05D004944 ORTHO05D005989 4.2e-17 94.0 54 77.8
RcHm_v2.0_Chr4g0391951 Rosa chinensis HOM05D004944 ORTHO05D005989 1.6e-16 92.0 93 45.2
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 2.7e-16 91.3 144 38.2
Peaxi162Scf00309g00011 Petunia axillaris HOM05D004944 ORTHO05D005989 1.8e-15 88.6 52 80.8
SHI03976 Sapria himalayana HOM05D004944 ORTHO05D005989 1.8e-15 88.6 54 74.1
Prupe.2G099800 Prunus persica HOM05D004944 ORTHO05D005989 4.5e-11 73.9 210 32.9
Psat5g213600 Pisum sativum HOM05D004944 ORTHO05D005989 5.9e-11 73.6 151 35.1


User provided reference genes

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