Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G2566 Erigeron canadensis HOM05D003365 ORTHO05D003899 7.1e-195 683.7 337 100.0
HanXRQChr15g0468271 Helianthus annuus HOM05D003365 ORTHO05D003899 1.3e-95 354.0 288 61.5
Lsat_1_v5_gn_5_179340 Lactuca sativa HOM05D003365 ORTHO05D003899 4.9e-95 352.1 288 60.1
ECA248G1941 Erigeron canadensis HOM05D003365 ORTHO05D000452 3.6e-90 335.9 305 56.7
HanXRQChr09g0249321 Helianthus annuus HOM05D003365 ORTHO05D003899 4.0e-73 279.3 314 49.4
Dinv04652 Davidia involucrata HOM05D003365 ORTHO05D003899 9.0e-65 251.5 350 44.9
TWI75G0239 Tripterygium wilfordii HOM05D003365 ORTHO05D003899 1.8e-60 237.3 336 41.1
Gorai.007G154100 Gossypium raimondii HOM05D003365 ORTHO05D003899 1.3e-58 231.1 276 47.5
Gohir.A11G137500 Gossypium hirsutum HOM05D003365 ORTHO05D003899 1.6e-58 230.7 276 47.5
DCAR_018569 Daucus carota HOM05D003365 ORTHO05D003899 4.8e-58 229.2 358 41.3
Eucgr.K02172 Eucalyptus grandis HOM05D003365 ORTHO05D003899 1.8e-57 227.3 351 39.9
Gohir.D11G143900 Gossypium hirsutum HOM05D003365 ORTHO05D003899 3.1e-57 226.5 276 46.7
MBI10_g18941_MAGBIO Magnolia biondii HOM05D003365 ORTHO05D003899 5.3e-57 225.7 206 51.0
Prupe.8G203400 Prunus persica HOM05D003365 ORTHO05D003899 6.9e-57 225.3 305 42.6
EL10Ac7g17831 Beta vulgaris HOM05D003365 ORTHO05D003899 3.4e-56 223.0 334 42.2
Eucgr.L00369 Eucalyptus grandis HOM05D003365 ORTHO05D003899 4.5e-56 222.6 319 42.6
vmacro14754 Vaccinium macrocarpon HOM05D003365 ORTHO05D003899 1.3e-55 221.1 317 44.2
TAR365G1159 Trochodendron aralioides HOM05D003365 ORTHO05D003899 1.7e-55 220.7 257 45.1
Hund05541 Selenicereus undatus HOM05D003365 ORTHO05D003899 2.2e-55 220.3 342 39.8
Hund05542 Selenicereus undatus HOM05D003365 ORTHO05D003899 2.2e-55 220.3 342 39.8
GSVIVG01028643001 Vitis vinifera HOM05D003365 ORTHO05D003899 2.9e-55 219.9 273 44.7
Medtr7g058430 Medicago truncatula HOM05D003365 ORTHO05D003899 8.4e-55 218.4 300 42.3
Lj2C1132T2 Lonicera japonica HOM05D003365 ORTHO05D003899 1.4e-54 217.6 323 39.9
Glyma.08G354400 Glycine max HOM05D003365 ORTHO05D003899 1.9e-54 217.2 311 41.5
Potri.002G241900 Populus trichocarpa HOM05D003365 ORTHO05D003899 1.9e-54 217.2 333 39.9
Ciclev10023514m.g Citrus clementina HOM05D003365 ORTHO05D003899 3.2e-54 216.5 336 40.5
Dinv38244 Davidia involucrata HOM05D003365 ORTHO05D003899 5.5e-54 215.7 202 53.0
Migut.D00534 Erythranthe guttata HOM05D003365 ORTHO05D003899 1.2e-53 214.5 247 42.9
TWI36G1690 Tripterygium wilfordii HOM05D003365 ORTHO05D003899 1.2e-53 214.5 303 41.3
QL09p054586 Quercus lobata HOM05D003365 ORTHO05D003899 1.6e-53 214.2 238 49.6
Lj1g0007670 Lotus japonicus HOM05D003365 ORTHO05D003899 2.1e-53 213.8 344 40.1
Aqoxy2G03887 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 2.7e-53 213.4 289 41.5
Duzib138G0916 Durio zibethinus HOM05D003365 ORTHO05D003899 2.7e-53 213.4 273 43.2
MD10G1165000 Malus domestica HOM05D003365 ORTHO05D003899 2.7e-53 213.4 358 39.9
SGA_v2.0_scaffold1G00747 Striga asiatica HOM05D003365 ORTHO05D003899 3.5e-53 213.0 318 39.9
Sc05g0002210 Simmondsia chinensis HOM05D003365 ORTHO05D003899 1.0e-52 211.5 275 41.5
Glyma.18G171400 Glycine max HOM05D003365 ORTHO05D003899 1.3e-52 211.1 310 41.0
Thecc.01G226500 Theobroma cacao HOM05D003365 ORTHO05D003899 1.3e-52 211.1 308 38.3
Ca_30737_v3 Cicer arietinum L. HOM05D003365 ORTHO05D003899 1.8e-52 210.7 300 40.3
Psat3g144800 Pisum sativum HOM05D003365 ORTHO05D003899 3.0e-52 209.9 300 39.7
Cpa.g.sc8.160 Carica papaya HOM05D003365 ORTHO05D003899 3.9e-52 209.5 351 37.6
AUR62031803 Chenopodium quinoa HOM05D003365 ORTHO05D003899 3.9e-52 209.5 266 45.5
RcHm_v2.0_Chr6g0284931 Rosa chinensis HOM05D003365 ORTHO05D003899 6.7e-52 208.8 290 42.4
MELO3C021013.2 Cucumis melo HOM05D003365 ORTHO05D003899 1.1e-51 208.0 342 38.0
Manes.12G045750 Manihot esculenta HOM05D003365 ORTHO05D003899 1.1e-51 208.0 303 42.6
CiPaw.03G149600 Carya illinoinensis HOM05D003365 ORTHO05D003899 1.5e-51 207.6 290 41.0
Actinidia09483 Actinidia chinensis HOM05D003365 ORTHO05D003899 1.9e-51 207.2 272 45.6
Lalb_Chr19g0125591 Lupinus albus HOM05D003365 ORTHO05D003899 1.9e-51 207.2 315 38.7
Cc01_g17080 Coffea canephora HOM05D003365 ORTHO05D003899 2.5e-51 206.8 322 39.1
MD04G1005700 Malus domestica HOM05D003365 ORTHO05D003899 4.3e-51 206.1 197 48.7
VMungo1383G0959 Vigna mungo HOM05D003365 ORTHO05D003899 5.7e-51 205.7 345 37.4
Ah.08g214240 Amaranthus hybridus HOM05D000836 ORTHO05D000709 7.4e-51 205.3 273 41.4
Eucgr.K02171 Eucalyptus grandis HOM05D003365 ORTHO05D003899 1.3e-50 204.5 195 49.2
Lalb_Chr12g0209691 Lupinus albus HOM05D003365 ORTHO05D003899 1.3e-50 204.5 284 40.5
Cc01_g17090 Coffea canephora HOM05D003365 ORTHO05D003899 1.6e-50 204.1 324 39.2
Nn3g19957 Nelumbo nucifera HOM05D003365 ORTHO05D003899 1.6e-50 204.1 347 36.3
ATR0736G227 Amborella trichopoda HOM05D003365 ORTHO05D003899 2.1e-50 203.8 317 40.7
CSS0049236 Camellia sinensis var. sinensis HOM05D003365 ORTHO05D003899 2.1e-50 203.8 353 37.4
Nn1g07847 Nelumbo nucifera HOM05D003365 ORTHO05D003899 2.1e-50 203.8 324 38.3
Ca_07518_v3 Cicer arietinum L. HOM05D003365 ORTHO05D003899 3.7e-50 203.0 253 42.7
Phvul.008G125500 Phaseolus vulgaris HOM05D003365 ORTHO05D003899 8.2e-50 201.8 311 39.9
COL.COLO4_10278 Corchorus olitorius HOM05D003365 ORTHO05D003899 1.1e-49 201.4 335 37.6
CsaV3_7G025900 Cucumis sativus L. HOM05D003365 ORTHO05D003899 1.4e-49 201.1 291 40.5
ClCG09G009060 Citrullus lanatus HOM05D003365 ORTHO05D003899 5.3e-49 199.1 330 37.3
FAN22G2379 Fragaria x ananassa HOM05D003365 ORTHO05D003899 3.4e-48 196.4 208 45.7
Prupe.1G006100 Prunus persica HOM05D003365 ORTHO05D003899 3.4e-48 196.4 263 40.3
Rhsim09G0055000 Rhododendron simsii HOM05D003365 ORTHO05D003899 3.4e-48 196.4 365 37.3
RcHm_v2.0_Chr4g0386021 Rosa chinensis HOM05D003365 ORTHO05D003899 4.5e-48 196.1 249 40.6
Psat0s1248g0040 Pisum sativum HOM05D003365 ORTHO05D003899 5.9e-48 195.7 340 39.1
PSO017G5557 Papaver somniferum HOM05D003365 ORTHO05D003899 1.0e-47 194.9 344 35.2
Sopen09g034680 Solanum pennellii HOM05D003365 ORTHO05D003899 1.0e-47 194.9 304 39.1
MSTRG.18389 Avicennia marina HOM05D003365 ORTHO05D003899 1.3e-47 194.5 306 39.2
Oeu006726.3 Olea europaea HOM05D003365 ORTHO05D003899 2.2e-47 193.7 272 38.6
Sed0009580 Sechium edule HOM05D003365 ORTHO05D003899 2.2e-47 193.7 281 39.9
Sed0009490 Sechium edule HOM05D003365 ORTHO05D003899 2.9e-47 193.4 240 42.5
Medtr4g022320 Medicago truncatula HOM05D003365 ORTHO05D003899 3.8e-47 193.0 283 42.8
arahy.Tifrunner.gnm1.ann1.2FCG8X Arachis hypogaea HOM05D003365 ORTHO05D003899 8.4e-47 191.8 343 36.7
Nitab4.5_0002428g0050 Nicotiana tabacum HOM05D003365 ORTHO05D003899 8.4e-47 191.8 330 38.5
Gohir.D02G123200 Gossypium hirsutum HOM05D003365 ORTHO05D003899 1.1e-46 191.4 315 37.5
FvH4_4g00570 Fragaria vesca HOM05D003365 ORTHO05D003899 1.4e-46 191.0 245 40.0
FAN12G1463 Fragaria x ananassa HOM05D003365 ORTHO05D003899 1.4e-46 191.0 245 40.0
Lsat_1_v5_gn_1_72781 Lactuca sativa HOM05D003365 ORTHO05D003899 1.4e-46 191.0 256 39.8
Gorai.005G131100 Gossypium raimondii HOM05D003365 ORTHO05D003899 1.9e-46 190.7 315 37.5
arahy.Tifrunner.gnm1.ann1.E2CR6D Arachis hypogaea HOM05D003365 ORTHO05D003899 2.5e-46 190.3 343 36.4
Lj3g0005766 Lotus japonicus HOM05D003365 ORTHO05D003899 3.2e-46 189.9 282 40.8
Potri.003G178700 Populus trichocarpa HOM05D003365 ORTHO05D003899 3.2e-46 189.9 201 45.3
Solyc09g091790.3 Solanum lycopersicum HOM05D003365 ORTHO05D003899 5.5e-46 189.1 299 38.1
TPR.G5559 Trifolium pratense HOM05D003365 ORTHO05D003899 7.2e-46 188.7 288 39.2
TPR.G5612 Trifolium pratense HOM05D003365 ORTHO05D003899 7.2e-46 188.7 279 41.2
CAN.G500.11 Capsicum annuum HOM05D003365 ORTHO05D003899 9.3e-46 188.3 312 38.5
Duzib151G0831 Durio zibethinus HOM05D003365 ORTHO05D003899 9.3e-46 188.3 288 39.2
Gohir.D09G198000 Gossypium hirsutum HOM05D003365 ORTHO05D003899 9.3e-46 188.3 347 36.3
HanXRQChr01g0022261 Helianthus annuus HOM05D003365 ORTHO05D003899 4.6e-45 186.0 269 40.5
Aa31sc154G60 Aethionema arabicum HOM05D003365 ORTHO05D003899 6.1e-45 185.7 264 42.0
Gorai.006G221600 Gossypium raimondii HOM05D003365 ORTHO05D003899 6.1e-45 185.7 347 36.0
HanXRQChr01g0022241 Helianthus annuus HOM05D003365 ORTHO05D003899 7.9e-45 185.3 302 37.7
PGSC0003DMG400029661 Solanum tuberosum HOM05D003365 ORTHO05D003899 7.9e-45 185.3 250 40.8
Gohir.A09G204300 Gossypium hirsutum HOM05D003365 ORTHO05D003899 1.0e-44 184.9 347 35.7
BraA03t13524Z Brassica rapa HOM05D003365 ORTHO05D003899 3.0e-44 183.3 266 41.4
Peaxi162Scf00047g00641 Petunia axillaris HOM05D003365 ORTHO05D003899 3.0e-44 183.3 264 41.7
Oeu022364.1 Olea europaea HOM05D003365 ORTHO05D003899 5.1e-44 182.6 298 38.3
Thecc.04G205700 Theobroma cacao HOM05D003365 ORTHO05D003899 5.1e-44 182.6 359 35.4
Ciclev10004856m.g Citrus clementina HOM05D003365 ORTHO05D003899 6.7e-44 182.2 315 34.9
Sabra03G0131000 Salix brachista HOM05D003365 ORTHO05D003899 6.7e-44 182.2 209 41.6
Os02g0621500 Oryza sativa ssp. japonica HOM05D003365 ORTHO05D003899 1.5e-43 181.0 253 39.1
THA.LOC104804607 Tarenaya hassleriana HOM05D003365 ORTHO05D003899 1.5e-43 181.0 253 42.3
CDE01G0789 Ceratophyllum demersum HOM05D003365 ORTHO05D003899 7.4e-43 178.7 180 48.3
CANSAT01G3135 Cannabis sativa HOM05D003365 ORTHO05D003899 9.7e-43 178.3 250 41.6
THA.LOC104808785 Tarenaya hassleriana HOM05D003365 ORTHO05D003899 3.7e-42 176.4 304 38.8
A03p43940 Brassica napus HOM05D003365 ORTHO05D003899 4.8e-42 176.0 270 40.4
Thhalv10002569m.g Eutrema salsugineum HOM05D003365 ORTHO05D003899 4.8e-42 176.0 263 41.1
Zm00001eb247460 Zea mays HOM05D003365 ORTHO05D003899 4.8e-42 176.0 258 40.7
BcaB03g14565 Brassica carinata HOM05D003365 ORTHO05D003899 1.1e-41 174.9 264 40.2
BolC3t17715H Brassica oleracea HOM05D003365 ORTHO05D003899 1.1e-41 174.9 266 39.5
Carub.0003s2521 Capsella rubella HOM05D003365 ORTHO05D003899 1.1e-41 174.9 283 39.2
Atru.chr4.1724 Acer truncatum HOM05D003365 ORTHO05D003899 1.8e-41 174.1 199 44.7
Thhalv10002593m.g Eutrema salsugineum HOM05D003365 ORTHO05D003899 1.8e-41 174.1 318 37.1
BcaC01g03254 Brassica carinata HOM05D003365 ORTHO05D003899 4.1e-41 172.9 265 40.4
FAN12G0224 Fragaria x ananassa HOM05D003365 ORTHO05D003899 4.1e-41 172.9 192 42.7
C03p54290 Brassica napus HOM05D003365 ORTHO05D003899 5.3e-41 172.6 265 40.4
Migut.N00374 Erythranthe guttata HOM05D003365 ORTHO05D003899 6.9e-41 172.2 255 37.3
AT3G24800 Arabidopsis thaliana HOM05D003365 ORTHO05D003899 2.6e-40 170.2 322 35.1
HPP92_012644 Vanilla planifolia HOM05D003365 ORTHO05D003899 2.6e-40 170.2 265 35.1
MSTRG.24620 Avicennia marina HOM05D003365 ORTHO05D003899 3.4e-40 169.9 299 38.5
CARHR101150 Cardamine hirsuta HOM05D003365 ORTHO05D003899 5.9e-40 169.1 271 38.0
AagrBONN_evm.TU.Sc2ySwM_368.1757 Anthoceros agrestis HOM05D003365 ORTHO05D003899 7.7e-40 168.7 239 38.9
Sp3g22540 Schrenkiella parvula HOM05D003365 ORTHO05D003899 3.8e-39 166.4 281 39.9
SpUn0027_0020 Schrenkiella parvula HOM05D003365 ORTHO05D003899 3.8e-39 166.4 281 39.9
AL3G40570 Arabidopsis lyrata HOM05D003365 ORTHO05D003899 6.5e-39 165.6 303 36.0
BcaB06g26698 Brassica carinata HOM05D003365 ORTHO05D003899 8.5e-39 165.2 262 38.5
A07p07410 Brassica napus HOM05D003365 ORTHO05D003899 1.1e-38 164.9 256 40.2
C07p11180 Brassica napus HOM05D003365 ORTHO05D003899 5.5e-38 162.5 255 40.4
FAN24G3306 Fragaria x ananassa HOM05D003365 ORTHO05D003899 7.2e-38 162.2 298 37.2
BraA07t28528Z Brassica rapa HOM05D003365 ORTHO05D003899 1.2e-37 161.4 262 38.9
BcaC06g35760 Brassica carinata HOM05D003365 ORTHO05D003899 6.1e-37 159.1 261 38.3
FAN27G1822 Fragaria x ananassa HOM05D003365 ORTHO05D003899 5.1e-36 156.0 281 37.4
SEGI_15541 Sequoiadendron giganteum HOM05D003365 ORTHO05D003899 1.1e-35 154.8 186 42.5
SGA_v2.0_scaffold216G42379 Striga asiatica HOM05D003365 ORTHO05D003899 1.5e-35 154.5 337 33.5
Actinidia23724 Actinidia chinensis HOM05D003365 ORTHO05D003899 3.3e-35 153.3 311 36.7
SEGI_11490 Sequoiadendron giganteum HOM05D003365 ORTHO05D003899 3.3e-35 153.3 186 42.5
BolC7t41590H Brassica oleracea HOM05D003365 ORTHO05D003899 4.3e-35 152.9 270 37.0
Pp3c1_21360 Physcomitrium patens HOM05D003365 ORTHO05D003899 7.4e-35 152.1 179 40.2
Pp3c2_17040 Physcomitrium patens HOM05D003365 ORTHO05D003899 2.4e-33 147.1 214 36.9
Pp3c7_700 Physcomitrium patens HOM05D003365 ORTHO05D003899 7.2e-30 135.6 184 39.7
Aa31LG4G13410 Aethionema arabicum HOM05D003365 ORTHO05D003899 1.2e-29 134.8 176 40.9
Pp3c2_34310 Physcomitrium patens HOM05D003365 ORTHO05D003899 3.6e-29 133.3 228 33.3
AUR62008908 Chenopodium quinoa HOM05D003365 ORTHO05D003899 1.5e-27 127.9 308 32.8
TPR.G9032 Trifolium pratense HOM05D003365 ORTHO05D003899 3.7e-26 123.2 133 45.9
FAN15G1528 Fragaria x ananassa HOM05D003365 ORTHO05D003899 9.1e-25 118.6 142 44.4
Pp3c11_26150 Physcomitrium patens HOM05D003365 ORTHO05D003899 3.5e-24 116.7 168 37.5
FvH4_6g51520 Fragaria vesca HOM05D003365 ORTHO05D003899 1.7e-23 114.4 249 32.5
Haze_24790 Corylus avellana HOM05D003365 ORTHO05D003899 5.0e-23 112.8 120 46.7
vmacro05009 Vaccinium macrocarpon HOM05D003365 ORTHO05D003899 1.5e-22 111.3 170 36.5
SEGI_02131 Sequoiadendron giganteum HOM05D003365 ORTHO05D003899 1.9e-22 110.9 149 38.3
Oeu022255.1 Olea europaea HOM05D003365 ORTHO05D003899 9.4e-22 108.6 251 32.3
Nitab4.5_0004214g0020 Nicotiana tabacum HOM05D003365 ORTHO05D003899 1.2e-21 108.2 162 40.7
PRCOL_00001994 Prasinoderma coloniale HOM05D003365 ORTHO05D003899 8.0e-21 105.5 238 31.9
Potri.001G049300 Populus trichocarpa HOM05D003365 ORTHO05D003899 8.8e-20 102.1 80 56.2
Cpa.g.sc494.2 Carica papaya HOM05D003365 ORTHO05D003899 4.4e-19 99.8 80 52.5
Gohir.A03G094000 Gossypium hirsutum HOM05D003365 ORTHO05D003899 5.7e-19 99.4 196 36.2
BcaC06g35759 Brassica carinata HOM05D003365 ORTHO05D003899 5.3e-17 92.8 120 44.2
unitig_22.g5307 Utricularia gibba HOM05D003365 ORTHO05D003899 1.2e-16 91.7 61 60.7
COL.COLO4_04564 Corchorus olitorius HOM05D003365 ORTHO05D003899 4.5e-16 89.7 72 54.2
CAN.G572.29 Capsicum annuum HOM05D003365 ORTHO05D003899 7.7e-16 89.0 112 42.0
BolC7t41593H Brassica oleracea HOM05D003365 ORTHO05D003899 3.8e-15 86.7 62 58.1
MCO16G654 Micromonas commoda HOM05D003365 ORTHO05D003899 3.8e-15 86.7 233 29.6
Rhsim09G0055200 Rhododendron simsii HOM05D003365 ORTHO05D003899 6.5e-15 85.9 62 59.7
CBR_g39028 Chara braunii HOM05D003365 ORTHO05D003899 1.9e-14 84.3 233 28.8
Cre02.g098200 Chlamydomonas reinhardtii HOM05D003365 ORTHO05D003899 2.5e-14 84.0 61 54.1
SHI01318 Sapria himalayana HOM05D003365 ORTHO05D003899 4.2e-14 83.2 118 39.8
CAN.G186.14 Capsicum annuum HOM05D003365 ORTHO05D003899 1.6e-13 81.3 137 37.2
SHI01326 Sapria himalayana HOM05D000024 ORTHO05D000007 4.7e-13 79.7 62 54.8
CAN.G859.9 Capsicum annuum HOM05D003365 ORTHO05D003899 2.6e-11 73.9 129 34.9
CAN.G8.3 Capsicum annuum HOM05D003365 ORTHO05D003899 1.7e-10 71.2 115 37.4
Hund18375 Selenicereus undatus HOM05D003365 ORTHO05D003899 3.1e-09 67.0 91 36.3
Aqoxy4G01303 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 2.7e-08 63.9 61 45.9
CAN.G56.16 Capsicum annuum HOM05D000222 ORTHO05D003899 3.5e-08 63.5 109 33.9
Aqoxy4G01269 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 4.5e-08 63.2 67 40.3
Aqoxy4G00791 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 1.1e-06 58.5 74 37.8
Aqoxy4G01232 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 1.1e-06 58.5 90 33.3
FvH4_2g19100 Fragaria vesca HOM05D003365 ORTHO05D003899 1.1e-06 58.5 91 39.6
Aqoxy4G00913 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 1.5e-06 58.2 77 35.1
QL09p054597 Quercus lobata HOM05D003365 ORTHO05D003899 2.5e-06 57.4 104 34.6
Aqoxy4G01257 Aquilegia oxysepala HOM05D000101 ORTHO05D000089 3.2e-06 57.0 68 36.8
Aqoxy4G00832 Aquilegia oxysepala HOM05D003365 ORTHO05D003899 9.5e-06 55.5 68 36.8


User provided reference genes

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