Gene: CANSAT01G3135

General Information

Structural Information

  • Species Cannabis sativa
  • Gene Identifier CANSAT01G3135
  • Transcript Identifier CANSAT01G3135.01
  • Gene Type Coding gene
  • Location NC_044373.1 : 88956076-88958509 : negative

Gene Family Information

  • ID HOM05D003365
  • #Genes/#Species 203/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna-XM_030642341.1
  • pid XP_030498201.1
  • id gene-LOC115713859

Descriptions

  • Description The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071596
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process via the N-end rule pathway AT3G24800
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT3G24800
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT3G24800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT3G24800
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT3G24800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000151
ISO
PLAZA Integrative Orthologyubiquitin ligase complex AT3G24800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000433 Zinc finger, ZZ-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
IPR027370 RING-type zinc-finger, LisH dimerisation motif
IPR043145 Zinc finger, ZZ-type superfamily
Mapman id Description
19.2.1.2.2.2 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.Arg/N-recognin activities.type-II-residues E3 ubiquitin ligase (PRT1)