Gene: Pp3c1_21360

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_21360
  • Transcript Identifier Pp3c1_21360V3.2
  • Gene Type Coding gene
  • Location Chr01 : 16097162-16098736 : positive

Gene Family Information

  • ID HOM05D003365
  • #Genes/#Species 203/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_21360V3.2
  • pacid 32969238
  • alias Phypa_4239
  • alias Pp1s257_58V6
  • alias Phpat.001G080600
  • uniprot A0A2K1L905

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0043161
IBA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0071596
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process via the N-end rule pathway AT3G24800
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT3G24800
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT3G24800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT3G24800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000151
ISO
PLAZA Integrative Orthologyubiquitin ligase complex AT3G24800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000433 Zinc finger, ZZ-type
IPR027370 RING-type zinc-finger, LisH dimerisation motif
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR043145 Zinc finger, ZZ-type superfamily
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.1.2.2.2 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.Arg/N-recognin activities.type-II-residues E3 ubiquitin ligase (PRT1)