Gene: Zm00001eb247460
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb247460
- Transcript Identifier Zm00001eb247460_T003
- Gene Type Coding gene
- Location 5 : 189470358-189486332 : negative
Gene Family Information
- ID HOM05D003365
- #Genes/#Species 203/93
- Phylogenetic origin
- ID ORTHO05D003899
- #Genes/#Species 200/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Zm00001eb247460_T003
- pid Zm00001eb247460_P003
- uniprot A0A1D6HDE4
- uniprot A0A1D6HDE5
- uniprot A0A1D6HDE6
- uniprot A0A1D6HDE7
- uniprot A0A1D6HDF1
- uniprot A0A1D6HDF2
- uniprot A0A3L6EUF6
- uniprot A0A1D6HDF3
- uniprot A0A1D6HDE3
- uniprot A0A1D6HDF0
- uniprot A0A3L6EUT6
- uniprot A0A1D6HDE8
- uniprot A0A1D6HDE9
- V4_identifier Zm00001d017252
Descriptions
- Description Zm00001e015136
- Description E3 ubiquitin-protein ligase PRT1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016567 | IEA | GOA Database | protein ubiquitination | |
GO:0043161 | IBA | GOA Database | proteasome-mediated ubiquitin-dependent protein catabolic process | |
GO:0071596 | IEA | GOA Database | ubiquitin-dependent protein catabolic process via the N-end rule pathway | |
GO:0050832 | IEA | GOA Database | defense response to fungus | |
GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT3G24800 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0008270 | IEA | GOA Database | zinc ion binding | |
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0016874 | IEA | GOA Database | ligase activity | |
GO:0061630 | IBA IEA | GOA Database | ubiquitin protein ligase activity | |
GO:0004842 | ISO | PLAZA Integrative Orthology | ubiquitin-protein transferase activity | AT3G24800 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016021 | IEA | GOA Database | integral component of membrane | |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0000151 | ISO | PLAZA Integrative Orthology | ubiquitin ligase complex | AT3G24800 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.1.2.2.2 | Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.Arg/N-recognin activities.type-II-residues E3 ubiquitin ligase (PRT1) |