Gene: Zm00001eb247460

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb247460
  • Transcript Identifier Zm00001eb247460_T003
  • Gene Type Coding gene
  • Location 5 : 189470358-189486332 : negative

Gene Family Information

  • ID HOM05D003365
  • #Genes/#Species 203/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb247460_T003
  • pid Zm00001eb247460_P003
  • uniprot A0A1D6HDE4
  • uniprot A0A1D6HDE5
  • uniprot A0A1D6HDE6
  • uniprot A0A1D6HDE7
  • uniprot A0A1D6HDF1
  • uniprot A0A1D6HDF2
  • uniprot A0A3L6EUF6
  • uniprot A0A1D6HDF3
  • uniprot A0A1D6HDE3
  • uniprot A0A1D6HDF0
  • uniprot A0A3L6EUT6
  • uniprot A0A1D6HDE8
  • uniprot A0A1D6HDE9
  • V4_identifier Zm00001d017252

Descriptions

  • Description Zm00001e015136
  • Description E3 ubiquitin-protein ligase PRT1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0043161
IBA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0071596
IEA
GOA Databaseubiquitin-dependent protein catabolic process via the N-end rule pathway
GO:0050832
IEA
GOA Databasedefense response to fungus
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT3G24800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0016874
IEA
GOA Databaseligase activity
GO:0061630
IBA
IEA
GOA Databaseubiquitin protein ligase activity
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT3G24800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0000151
ISO
PLAZA Integrative Orthologyubiquitin ligase complex AT3G24800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR043145 Zinc finger, ZZ-type superfamily
IPR001841 Zinc finger, RING-type
IPR000433 Zinc finger, ZZ-type
Mapman id Description
19.2.1.2.2.2 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.Arg/N-recognin activities.type-II-residues E3 ubiquitin ligase (PRT1)